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SKI
HPA
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PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SKI
Synonyms
Gene descriptioni

Full gene name according to HGNC.

SKI proto-oncogene
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband
Chromosome location (bp) 2227388 - 2310213
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

1
Ensembl ENSG00000157933 (version 109)
Entrez gene 6497
HGNC HGNC:10896
UniProt P12755 (UniProt - Evidence at protein level)
neXtProt NX_P12755
GeneCards SKI
Antibodypedia SKI antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

May play a role in terminal differentiation of skeletal muscle cells but not in the determination of cells to the myogenic lineage. Functions as a repressor of TGF-beta signaling.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes the nuclear protooncogene protein homolog of avian sarcoma viral (v-ski) oncogene. It functions as a repressor of TGF-beta signaling, and may play a role in neural tube development and muscle differentiation. [provided by RefSeq, Oct 2009]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SKI-201
ENSP00000367797
ENST00000378536
P12755
[Direct mapping] Ski oncogene
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0000978 [RNA polymerase II cis-regulatory region sequence-specific DNA binding]
GO:0000981 [DNA-binding transcription factor activity, RNA polymerase II-specific]
GO:0001227 [DNA-binding transcription repressor activity, RNA polymerase II-specific]
GO:0001843 [neural tube closure]
GO:0002089 [lens morphogenesis in camera-type eye]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005667 [transcription regulator complex]
GO:0005737 [cytoplasm]
GO:0005813 [centrosome]
GO:0006351 [DNA-templated transcription]
GO:0007179 [transforming growth factor beta receptor signaling pathway]
GO:0008270 [zinc ion binding]
GO:0008285 [negative regulation of cell population proliferation]
GO:0009948 [anterior/posterior axis specification]
GO:0010626 [negative regulation of Schwann cell proliferation]
GO:0014902 [myotube differentiation]
GO:0016604 [nuclear body]
GO:0016605 [PML body]
GO:0017053 [transcription repressor complex]
GO:0019901 [protein kinase binding]
GO:0019904 [protein domain specific binding]
GO:0021772 [olfactory bulb development]
GO:0022011 [myelination in peripheral nervous system]
GO:0030177 [positive regulation of Wnt signaling pathway]
GO:0030326 [embryonic limb morphogenesis]
GO:0030512 [negative regulation of transforming growth factor beta receptor signaling pathway]
GO:0030514 [negative regulation of BMP signaling pathway]
GO:0031625 [ubiquitin protein ligase binding]
GO:0032926 [negative regulation of activin receptor signaling pathway]
GO:0032991 [protein-containing complex]
GO:0035019 [somatic stem cell population maintenance]
GO:0042802 [identical protein binding]
GO:0043010 [camera-type eye development]
GO:0043388 [positive regulation of DNA binding]
GO:0043585 [nose morphogenesis]
GO:0045668 [negative regulation of osteoblast differentiation]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0046332 [SMAD binding]
GO:0046811 [histone deacetylase inhibitor activity]
GO:0048147 [negative regulation of fibroblast proliferation]
GO:0048593 [camera-type eye morphogenesis]
GO:0048741 [skeletal muscle fiber development]
GO:0048870 [cell motility]
GO:0060021 [roof of mouth development]
GO:0060038 [cardiac muscle cell proliferation]
GO:0060041 [retina development in camera-type eye]
GO:0060325 [face morphogenesis]
GO:0060349 [bone morphogenesis]
GO:0060395 [SMAD protein signal transduction]
GO:0110165 [cellular anatomical entity]
GO:0140297 [DNA-binding transcription factor binding]
Show all
728 aa
80 kDa
No 0

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