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SLC30A2
HPA
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  • SLC30A2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SLC30A2
Synonyms ZNT2
Gene descriptioni

Full gene name according to HGNC.

Solute carrier family 30 member 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband p36.11
Chromosome location (bp) 26037252 - 26046118
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

2
Ensembl ENSG00000158014 (version 109)
Entrez gene 7780
HGNC HGNC:11013
UniProt Q9BRI3 (UniProt - Evidence at protein level)
neXtProt NX_Q9BRI3
GeneCards SLC30A2
Antibodypedia SLC30A2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

[Isoform 1]: Electroneutral proton-coupled antiporter concentrating zinc ions into a variety of intracellular organelles including endosomes, zymogen granules and mitochondria. Thereby, plays a crucial role in cellular zinc homeostasis to confer upon cells protection against its potential cytotoxicity 1, 2, 3, 4, 5, 6. Regulates the zinc concentration of milk, through the transport of zinc ions into secretory vesicles of mammary cells 7. By concentrating zinc ions into lysosomes participates to lysosomal-mediated cell death during early mammary gland involution 8.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Antiport, Ion transport, Transport, Zinc transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a zinc transporter that acts as a homodimer. The encoded protein plays a role in secreting zinc into breast milk. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2015]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SLC30A2-201
ENSP00000363394
ENST00000374276
Q9BRI3
[Direct mapping] Zinc transporter 2
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   6TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of ion transport and metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005385 [zinc ion transmembrane transporter activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0005764 [lysosome]
GO:0005765 [lysosomal membrane]
GO:0005768 [endosome]
GO:0005770 [late endosome]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006812 [cation transport]
GO:0006829 [zinc ion transport]
GO:0006882 [cellular zinc ion homeostasis]
GO:0008324 [cation transmembrane transporter activity]
GO:0010008 [endosome membrane]
GO:0010043 [response to zinc ion]
GO:0015297 [antiporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030658 [transport vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0042589 [zymogen granule membrane]
GO:0042802 [identical protein binding]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0046872 [metal ion binding]
GO:0055085 [transmembrane transport]
GO:0061088 [regulation of sequestering of zinc ion]
GO:0061090 [positive regulation of sequestering of zinc ion]
GO:0062111 [zinc ion import into organelle]
GO:0071577 [zinc ion transmembrane transport]
GO:0099503 [secretory vesicle]
GO:0140826 [zinc:proton antiporter activity]
GO:0140914 []
GO:0140915 []
GO:0140916 []
GO:0140917 []
Show all
372 aa
40.6 kDa
No 6
SLC30A2-202
ENSP00000363396
ENST00000374278
Q9BRI3
[Direct mapping] Zinc transporter 2
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of ion transport and metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005385 [zinc ion transmembrane transporter activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0005764 [lysosome]
GO:0005765 [lysosomal membrane]
GO:0005768 [endosome]
GO:0005770 [late endosome]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006812 [cation transport]
GO:0006829 [zinc ion transport]
GO:0006882 [cellular zinc ion homeostasis]
GO:0008324 [cation transmembrane transporter activity]
GO:0010008 [endosome membrane]
GO:0010043 [response to zinc ion]
GO:0015297 [antiporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030658 [transport vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0042589 [zymogen granule membrane]
GO:0042802 [identical protein binding]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0046872 [metal ion binding]
GO:0055085 [transmembrane transport]
GO:0061088 [regulation of sequestering of zinc ion]
GO:0061090 [positive regulation of sequestering of zinc ion]
GO:0062111 [zinc ion import into organelle]
GO:0071577 [zinc ion transmembrane transport]
GO:0140826 [zinc:proton antiporter activity]
GO:0140882 []
GO:0140915 []
GO:0140916 []
GO:0140917 []
Show all
323 aa
35.2 kDa
No 4

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