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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:361.9 nTPM
GTEx:361.9 nTPM
FANTOM5:526.1 Scaled Tags Per Million

VAGINA - Annotated protein expression
Pending normal tissue analysis

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA007394Antibody CAB026132
Squamous epithelial cells HighMedium





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

361.9
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 361.9
Samples: 156

Max nTPM: 880.3
Min nTPM: 116.1
Std nTPM: 158.2
Median nTPM: 337.5
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 880.3
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 842.8
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 807.0
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 784.9
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 757.8
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 750.7
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 744.0
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 671.8
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 671.0
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 649.2
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 637.9
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 636.0
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 633.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 624.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 619.2
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 609.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 562.9
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 551.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 546.3
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 540.4
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 530.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 526.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 519.5
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 518.9
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 508.8
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 488.5
GTEX-16NPV-2526-SM-6M483 50-59 years, female 485.3
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 484.9
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 483.7
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 479.2
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 472.5
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 469.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 468.1
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 463.7
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 462.9
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 459.9
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 458.8
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 458.8
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 454.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 443.3
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 440.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 437.0
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 426.8
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 426.7
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 425.2
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 422.4
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 416.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 414.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 407.3
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 404.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 404.6
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 402.5
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 400.4
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 399.5
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 397.5
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 393.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 385.4
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 384.0
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 380.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 378.9
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 371.4
GTEX-1C475-0526-SM-793AC 40-49 years, female 370.5
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 369.1
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 367.3
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 366.7
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 366.5
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 362.5
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 359.4
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 358.1
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 357.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 354.1
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 352.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 351.5
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 349.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 347.7
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 346.3
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 344.6
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 341.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 333.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 328.5
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 324.3
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 322.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 320.0
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 319.4
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 315.2
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 314.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 314.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 313.2
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 308.2
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 307.7
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 306.5
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 300.6
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 300.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 297.6
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 288.1
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 286.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 283.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 282.0
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 281.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 280.5
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 277.7
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 274.5
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 270.9
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 268.0
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 265.0
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 263.6
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 261.9
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 261.9
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 256.2
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 254.9
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 253.8
GTEX-14PKU-1326-SM-6871B 40-49 years, female 251.9
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 251.7
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 250.6
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 248.3
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 242.0
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 241.5
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 239.7
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 234.0
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 233.8
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 231.5
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 230.3
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 227.6
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 226.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 225.6
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 224.6
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 216.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 215.9
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 214.0
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 212.9
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 211.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 211.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 209.7
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 204.9
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 196.4
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 195.9
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 195.5
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 193.6
GTEX-S341-1226-SM-4AD5S 40-49 years, female 189.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 188.3
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 187.6
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 187.6
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 187.3
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 185.8
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 180.7
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 174.8
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 173.4
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 173.0
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 172.5
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 170.7
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 164.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 158.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 146.8
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 143.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 132.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 116.1
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

526.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 526.1
FF:10204-103F6 68 years, female 526.1

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