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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
APOA2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
39828.6
Number of samples
362
Samples
Sample
Description
pTPM
TCGA-DD-AAE6-01A
59 years, female, asian, stage:Stage I, alive, 141 days
145565.0
TCGA-DD-AADK-01A
68 years, female, asian, stage:Stage II, alive, 1049 days
130459.0
TCGA-CC-5259-01A
60 years, female, asian, stage:Stage IIIC, alive, 250 days
122510.0
TCGA-DD-A116-01A
68 years, male, asian, stage:Stage IIIA, dead, 1622 days
121553.0
TCGA-ES-A2HT-01A
54 years, male, black or african american, stage:Stage I, dead, 438 days
120092.0
TCGA-BC-A5W4-01A
69 years, male, white, stage:Stage IIIA, dead, 547 days
114245.0
TCGA-DD-A39X-01A
78 years, female, white, stage:Stage I, dead, 1694 days
107697.0
TCGA-DD-AADO-01A
55 years, male, asian, stage:Stage I, alive, 453 days
104910.0
TCGA-CC-A5UC-01A
63 years, male, asian, stage:Stage IIIA, dead, 347 days
104578.0
TCGA-DD-AADU-01A
60 years, male, asian, stage:Stage II, alive, 554 days
103511.0
TCGA-G3-AAV5-01A
67 years, male, white, stage:Stage II, alive, 354 days
102896.0
TCGA-2Y-A9H7-01A
81 years, female, white, stage:Stage I, alive, 1168 days
100978.0
TCGA-DD-AADN-01A
59 years, male, asian, stage:Stage I, alive, 898 days
99939.4
TCGA-DD-AAE1-01A
52 years, male, asian, stage:Stage I, alive, 552 days
93723.5
TCGA-DD-A39Y-01A
67 years, male, asian, stage:Stage I, dead, 171 days
91482.1
TCGA-DD-A3A3-01A
45 years, male, asian, stage:Stage I, dead, 535 days
90609.6
TCGA-G3-A25S-01A
64 years, male, white, stage:Stage I, dead, 416 days
90480.2
TCGA-CC-A7IE-01A
57 years, male, asian, stage:Stage IIIA, dead, 217 days
90322.8
TCGA-DD-A73B-01A
72 years, female, white, stage:Stage I, dead, 283 days
90220.0
TCGA-DD-AAEB-01A
60 years, male, asian, stage:Stage I, alive, 478 days
89170.2
TCGA-DD-A39Z-01A
43 years, female, stage:Stage II, dead, 601 days
88121.0
TCGA-DD-AACO-01A
40 years, male, asian, stage:Stage I, alive, 1876 days
86907.6
TCGA-EP-A2KB-01A
46 years, female, white, stage:Stage I, dead, 596 days
86208.6
TCGA-KR-A7K2-01A
64 years, male, white, stage:Stage I, alive, 829 days
85473.5
TCGA-ES-A2HS-01A
80 years, male, white, stage:Stage I, dead, 688 days
85422.3
TCGA-DD-A1EJ-01A
71 years, female, white, stage:Stage IIIC, dead, 1005 days
85172.4
TCGA-T1-A6J8-01A
68 years, male, white, stage:'--, alive, 23 days
84799.3
TCGA-DD-AACL-01A
66 years, female, asian, stage:Stage I, dead, 107 days
84334.3
TCGA-DD-A119-01A
40 years, male, asian, stage:Stage IV, dead, 223 days
84125.3
TCGA-DD-AADA-01A
66 years, female, asian, stage:Stage I, alive, 1233 days
83322.6
TCGA-DD-AAW0-01A
54 years, male, asian, stage:Stage I, alive, 2015 days
82058.3
TCGA-BC-A10U-01A
69 years, male, white, stage:'--, dead, 837 days
81757.4
TCGA-DD-AAVW-01A
35 years, male, asian, stage:Stage I, alive, 2317 days
80010.1
TCGA-DD-AACC-01A
61 years, male, asian, stage:Stage I, dead, 1685 days
78927.3
TCGA-DD-AADJ-01A
70 years, female, asian, stage:Stage I, alive, 1066 days
78098.1
TCGA-O8-A75V-01A
54 years, male, stage:Stage I, alive, 538 days
77339.7
TCGA-DD-A73G-01A
73 years, female, white, stage:Stage I, alive, 3478 days
77279.7
TCGA-G3-A3CG-01A
80 years, male, white, stage:Stage I, alive, 673 days
75612.1
TCGA-G3-AAV6-01A
53 years, female, white, stage:Stage IIIA, dead, 65 days
75535.0
TCGA-ED-A7PY-01A
20 years, female, asian, stage:Stage II, alive, 390 days
75001.0
TCGA-FV-A2QR-01A
75 years, male, white, stage:Stage I, dead, 581 days
73494.1
TCGA-CC-A7IL-01A
61 years, male, asian, stage:Stage IIIA, dead, 278 days
73172.8
TCGA-BC-A3KF-01A
66 years, female, white, stage:Stage I, alive, 8 days
72712.6
TCGA-CC-A123-01A
24 years, female, asian, stage:Stage IIIA, alive, 219 days
72510.7
TCGA-5C-A9VH-01A
70 years, male, white, stage:Stage I, alive, 322 days
72179.7
TCGA-2Y-A9HB-01A
66 years, male, stage:Stage I, alive, 260 days
71487.3
TCGA-DD-AACW-01A
43 years, male, asian, stage:Stage I, alive, 1424 days
70326.5
TCGA-ED-A7XP-01A
53 years, female, asian, stage:Stage II, alive, 400 days
70305.3
TCGA-FV-A496-01A
84 years, female, white, stage:Stage I, alive, 10 days
70247.2
TCGA-BC-A69H-01A
64 years, male, white, stage:Stage II, alive, 444 days
68841.1
TCGA-DD-AADY-01A
55 years, female, asian, stage:Stage I, alive, 555 days
68747.9
TCGA-WQ-A9G7-01A
71 years, female, white, stage:'--, alive, 30 days
68608.3
TCGA-CC-5262-01A
67 years, male, asian, stage:Stage IIIC, dead, 103 days
68163.7
TCGA-DD-AACJ-01A
75 years, male, asian, stage:Stage II, alive, 2102 days
68095.0
TCGA-DD-AAE9-01A
69 years, male, asian, stage:Stage I, alive, 722 days
68080.4
TCGA-FV-A2QQ-01A
80 years, male, white, stage:Stage I, alive, 729 days
67711.1
TCGA-DD-AAVZ-01A
38 years, male, asian, stage:Stage I, alive, 1900 days
67473.7
TCGA-EP-A3JL-01A
76 years, male, white, stage:Stage I, alive, 303 days
67471.3
TCGA-DD-A3A7-01A
67 years, male, stage:Stage IIIB, dead, 419 days
67171.0
TCGA-2Y-A9H0-01A
49 years, male, white, stage:Stage IIIA, alive, 3675 days
67090.3
TCGA-DD-AAW1-01A
55 years, male, asian, stage:Stage IIIA, alive, 1989 days
66936.3
TCGA-CC-5258-01A
48 years, male, asian, stage:Stage II, dead, 129 days
66537.2
TCGA-DD-AAED-01A
51 years, male, asian, stage:Stage I, alive, 763 days
65730.4
TCGA-GJ-A6C0-01A
75 years, female, white, stage:Stage II, dead, 31 days
65386.0
TCGA-DD-AACZ-01A
63 years, female, asian, stage:Stage I, dead, 171 days
65105.4
TCGA-DD-A3A8-01A
75 years, male, white, stage:Stage II, dead, 11 days
64585.7
TCGA-DD-A39V-01A
77 years, male, white, stage:Stage II, dead, 643 days
64348.2
TCGA-DD-AADP-01A
45 years, male, asian, stage:Stage I, alive, 458 days
63870.8
TCGA-MI-A75G-01A
63 years, male, white, stage:Stage II, alive, 698 days
63064.0
TCGA-MI-A75I-01A
61 years, male, black or african american, stage:'--, alive, 630 days
63023.0
TCGA-DD-AAD0-01A
73 years, female, asian, stage:Stage I, alive, 137 days
62995.9
TCGA-K7-A6G5-01A
66 years, male, white, stage:Stage I, alive, 512 days
62583.3
TCGA-ED-A8O5-01A
59 years, female, asian, stage:Stage IIIA, alive, 406 days
62413.8
TCGA-GJ-A3OU-01A
59 years, male, white, stage:Stage I, alive, 879 days
60318.0
TCGA-DD-AADF-01A
64 years, female, asian, stage:Stage I, dead, 115 days
59754.8
TCGA-DD-A1EI-01A
46 years, male, asian, stage:Stage I, alive, 183 days
59426.1
TCGA-RG-A7D4-01A
69 years, male, black or african american, stage:Stage II, alive, 1098 days
59205.2
TCGA-MI-A75C-01A
64 years, male, white, stage:Stage I, alive, 291 days
58769.4
TCGA-DD-AADR-01A
58 years, male, asian, stage:Stage I, alive, 2028 days
58587.2
TCGA-DD-A3A9-01A
64 years, female, white, stage:Stage IVB, dead, 931 days
58578.7
TCGA-DD-A1EG-01A
76 years, male, white, stage:Stage I, dead, 1372 days
58286.3
TCGA-CC-A9FS-01A
55 years, male, asian, stage:Stage II, alive, 211 days
58033.3
TCGA-DD-AAVR-01A
44 years, male, asian, stage:Stage I, alive, 2513 days
57946.2
TCGA-G3-AAV4-01A
83 years, female, white, stage:Stage I, dead, 27 days
57068.6
TCGA-2Y-A9H3-01A
45 years, male, white, stage:Stage II, alive, 1516 days
56973.3
TCGA-G3-A5SI-01A
44 years, male, asian, stage:Stage II, dead, 768 days
56927.2
TCGA-RC-A7SF-01A
66 years, male, asian, stage:Stage I, alive, 579 days
56771.6
TCGA-2Y-A9H1-01A
58 years, male, white, stage:Stage I, dead, 1229 days
56702.6
TCGA-DD-AAEA-01A
65 years, male, asian, stage:Stage I, alive, 575 days
56479.6
TCGA-CC-A7IG-01A
47 years, male, asian, stage:Stage II, dead, 299 days
56412.3
TCGA-EP-A2KC-01A
62 years, male, black or african american, stage:Stage I, dead, 19 days
56070.9
TCGA-DD-A4NN-01A
56 years, female, white, stage:Stage I, dead, 899 days
55825.4
TCGA-DD-AAEE-01A
55 years, male, asian, stage:Stage I, alive, 810 days
55045.7
TCGA-NI-A4U2-01A
71 years, male, white, stage:Stage IIIA, dead, 1791 days
54747.4
TCGA-DD-AACP-01A
64 years, male, asian, stage:Stage I, alive, 415 days
54710.7
TCGA-DD-AADS-01A
63 years, male, asian, stage:Stage I, alive, 474 days
54309.1
TCGA-XR-A8TC-01A
43 years, female, white, stage:Stage I, alive, 1339 days
54192.5
TCGA-MI-A75H-01A
77 years, male, white, stage:'--, alive, 747 days
54079.0
TCGA-ZP-A9D0-01A
67 years, female, black or african american, stage:'--, alive, 1091 days
54076.0
TCGA-2Y-A9GY-01A
64 years, female, white, stage:Stage II, dead, 757 days
53756.9
TCGA-DD-A4NH-01A
65 years, female, white, stage:Stage IIIB, alive, 917 days
53659.5
TCGA-DD-AADI-01A
43 years, female, asian, stage:Stage I, alive, 1085 days
53332.3
TCGA-DD-AAVU-01A
46 years, male, asian, stage:Stage II, alive, 2202 days
52724.3
TCGA-RC-A7SB-01A
53 years, male, asian, stage:Stage II, alive, 588 days
52378.1
TCGA-FV-A495-01A
51 years, female, white, stage:Stage II, alive, 1 days
52369.2
TCGA-DD-AAVY-01A
56 years, male, asian, stage:Stage IIIA, alive, 1970 days
51578.1
TCGA-CC-A8HU-01A
39 years, female, asian, stage:Stage IIIA, dead, 344 days
51440.3
TCGA-DD-AACQ-01A
50 years, male, asian, stage:Stage II, dead, 432 days
51263.1
TCGA-RC-A7S9-01A
47 years, female, asian, stage:Stage I, alive, 640 days
51217.2
TCGA-DD-A1EK-01A
64 years, female, white, stage:Stage IVB, dead, 558 days
51210.1
TCGA-ZS-A9CE-01A
79 years, female, white, stage:Stage II, alive, 1241 days
50665.9
TCGA-G3-A5SL-01A
70 years, male, white, stage:Stage II, alive, 621 days
50457.9
TCGA-G3-AAV2-01A
50 years, male, white, stage:Stage I, alive, 372 days
50159.7
TCGA-DD-AADD-01A
51 years, male, asian, stage:Stage I, alive, 1231 days
50121.1
TCGA-DD-AACE-01A
62 years, male, asian, stage:Stage I, alive, 2184 days
49942.0
TCGA-ZP-A9CZ-01A
72 years, male, asian, stage:'--, alive, 706 days
49231.1
TCGA-DD-AAC9-01A
51 years, male, asian, stage:Stage I, alive, 347 days
49092.1
TCGA-2Y-A9HA-01A
70 years, male, white, stage:Stage II, dead, 36 days
48850.2
TCGA-2Y-A9GU-01A
55 years, female, white, stage:Stage I, alive, 1939 days
48749.9
TCGA-KR-A7K0-01A
65 years, male, white, stage:Stage I, dead, 65 days
48653.5
TCGA-2Y-A9H6-01A
68 years, female, white, stage:Stage I, alive, 357 days
48555.6
TCGA-DD-AAC8-01A
72 years, male, asian, stage:Stage I, dead, 16 days
48215.2
TCGA-G3-AAV0-01A
58 years, male, asian, stage:Stage I, alive, 476 days
48194.8
TCGA-KR-A7K7-01A
61 years, female, white, stage:Stage II, alive, 951 days
48029.4
TCGA-DD-AADG-01A
70 years, male, asian, stage:Stage IIIA, alive, 1145 days
47745.7
TCGA-DD-A73D-01A
68 years, female, white, stage:Stage II, alive, 693 days
47600.3
TCGA-ZS-A9CG-01A
55 years, male, white, stage:Stage II, alive, 341 days
47331.0
TCGA-G3-A5SM-01A
58 years, male, white, stage:Stage II, alive, 520 days
47111.6
TCGA-ED-A8O6-01A
50 years, female, asian, stage:Stage IIIA, dead, 56 days
47035.0
TCGA-XR-A8TF-01A
74 years, male, white, stage:Stage I, dead, 693 days
47000.7
TCGA-WX-AA44-01A
64 years, female, white, stage:Stage I, alive, 615 days
46390.1
TCGA-DD-AAD6-01A
66 years, male, asian, stage:Stage IIIA, alive, 672 days
46254.7
TCGA-FV-A3R3-01A
38 years, female, white, stage:Stage I, dead, 366 days
46063.5
TCGA-DD-AADB-01A
51 years, male, asian, stage:Stage I, alive, 1242 days
45832.3
TCGA-RC-A6M4-01A
74 years, female, white, stage:Stage IIIA, alive, 22 days
45678.3
TCGA-3K-AAZ8-01A
65 years, male, black or african american, stage:Stage IIIB, alive, 396 days
45593.8
TCGA-HP-A5MZ-01A
78 years, male, stage:Stage I, dead, 91 days
45344.1
TCGA-G3-A3CJ-01A
52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
45124.3
TCGA-WQ-AB4B-01A
62 years, male, white, stage:Stage II, alive, 395 days
45013.2
TCGA-G3-AAV1-01A
51 years, male, asian, stage:Stage IIIC, dead, 359 days
44857.7
TCGA-DD-AAW2-01A
69 years, male, asian, stage:Stage I, alive, 1855 days
44732.0
TCGA-DD-AAE3-01A
50 years, male, asian, stage:Stage I, alive, 566 days
44728.8
TCGA-BC-A216-01A
62 years, female, white, stage:Stage IIIA, alive, 1351 days
44688.7
TCGA-ED-A66X-01A
35 years, male, asian, stage:Stage IIIA, alive, 406 days
44334.2
TCGA-DD-AACB-01A
74 years, female, asian, stage:Stage I, alive, 2324 days
44033.9
TCGA-CC-A7IH-01A
58 years, male, asian, stage:Stage IIIA, alive, 365 days
43675.1
TCGA-DD-AACT-01A
69 years, female, asian, stage:Stage I, alive, 1562 days
43582.7
TCGA-DD-AACY-01A
61 years, male, asian, stage:Stage I, alive, 1450 days
42990.0
TCGA-G3-AAV3-01A
58 years, female, white, stage:Stage II, alive, 412 days
42418.0
TCGA-DD-AACK-01A
70 years, male, asian, stage:Stage I, alive, 9 days
42319.0
TCGA-DD-AACG-01A
52 years, male, asian, stage:Stage II, dead, 469 days
42271.8
TCGA-UB-A7ME-01A
51 years, male, asian, stage:Stage I, alive, 486 days
42054.6
TCGA-ZS-A9CD-01A
73 years, male, white, stage:Stage II, dead, 1386 days
41881.6
TCGA-DD-A1EB-01A
72 years, female, stage:Stage I, alive, 2017 days
40944.5
TCGA-UB-A7MB-01A
24 years, male, white, stage:Stage II, alive, 601 days
40840.8
TCGA-DD-AADL-01A
58 years, male, asian, stage:Stage I, alive, 636 days
40622.4
TCGA-G3-A3CI-01A
71 years, male, white, stage:Stage I, alive, 180 days
40458.8
TCGA-DD-AAVS-01A
56 years, male, asian, stage:Stage I, alive, 1823 days
40203.8
TCGA-DD-AAVP-01A
48 years, male, asian, stage:Stage I, alive, 2752 days
39879.9
TCGA-DD-A3A2-01A
76 years, female, white, stage:Stage I, dead, 2131 days
39623.5
TCGA-FV-A4ZP-01A
78 years, male, white, stage:Stage IIIA, dead, 2486 days
39454.3
TCGA-DD-A4NQ-01A
60 years, male, white, stage:Stage II, dead, 373 days
39298.8
TCGA-FV-A23B-01A
70 years, female, white, stage:Stage II, dead, 1852 days
39268.2
TCGA-DD-AAD8-01A
73 years, female, asian, stage:Stage I, alive, 1219 days
39191.6
TCGA-2Y-A9H8-01A
85 years, female, white, stage:'--, dead, 633 days
38907.0
TCGA-CC-A7IK-01A
59 years, male, asian, stage:Stage IIIA, dead, 262 days
38594.4
TCGA-G3-A7M5-01A
76 years, male, asian, stage:Stage I, alive, 447 days
38431.4
TCGA-DD-AACF-01A
68 years, male, asian, stage:Stage I, dead, 365 days
38395.3
TCGA-BD-A2L6-01A
69 years, male, white, stage:'--, alive, 1363 days
38319.1
TCGA-RC-A7SH-01A
42 years, male, asian, stage:Stage II, alive, 468 days
38310.5
TCGA-G3-A25Z-01A
58 years, male, asian, stage:Stage I, alive, 655 days
38096.2
TCGA-DD-AACS-01A
39 years, male, asian, stage:Stage I, alive, 1804 days
37935.3
TCGA-EP-A12J-01A
62 years, male, black or african american, stage:Stage I, alive, 570 days
37886.4
TCGA-DD-A4NR-01A
85 years, female, white, stage:Stage I, dead, 9 days
37565.9
TCGA-DD-AACX-01A
66 years, male, asian, stage:Stage II, alive, 170 days
37481.3
TCGA-LG-A6GG-01A
79 years, female, white, stage:Stage II, alive, 387 days
37238.8
TCGA-DD-AAD3-01A
43 years, male, asian, stage:Stage I, alive, 1295 days
37011.5
TCGA-DD-AAD2-01A
66 years, male, asian, stage:Stage I, alive, 658 days
36802.5
TCGA-XR-A8TE-01A
16 years, male, white, stage:Stage IIIA, alive, 925 days
36663.1
TCGA-2Y-A9H5-01A
59 years, female, white, stage:Stage I, dead, 555 days
36202.3
TCGA-CC-A8HT-01A
74 years, male, asian, stage:Stage IIIA, dead, 140 days
35768.2
TCGA-DD-AADM-01A
58 years, male, asian, stage:Stage II, dead, 12 days
35731.9
TCGA-CC-A7IF-01A
59 years, male, asian, stage:Stage IIIA, dead, 649 days
35351.4
TCGA-EP-A26S-01A
70 years, male, white, stage:Stage I, alive, 608 days
35202.4
TCGA-DD-A4NF-01A
72 years, male, white, stage:Stage I, alive, 942 days
34831.7
TCGA-DD-AADC-01A
53 years, male, asian, stage:Stage I, dead, 425 days
34687.5
TCGA-NI-A8LF-01A
74 years, male, white, stage:Stage I, alive, 799 days
34682.4
TCGA-BW-A5NO-01A
50 years, male, black or african american, stage:Stage IIIA, alive, 20 days
34593.4
TCGA-ED-A4XI-01A
58 years, male, asian, stage:Stage II, alive, 819 days
34576.6
TCGA-BC-A10Z-01A
62 years, female, white, stage:Stage I, dead, 34 days
34558.9
TCGA-FV-A3R2-01A
75 years, male, white, stage:Stage I, dead, 194 days
33968.8
TCGA-BC-A69I-01A
69 years, male, white, stage:Stage I, alive, 387 days
33907.8
TCGA-DD-A11B-01A
73 years, male, white, stage:Stage I, dead, 14 days
33814.7
TCGA-2Y-A9GW-01A
64 years, male, white, stage:Stage I, dead, 1271 days
33810.9
TCGA-DD-AAE4-01A
49 years, female, asian, stage:Stage I, alive, 608 days
33755.1
TCGA-KR-A7K8-01A
57 years, male, stage:Stage I, alive, 906 days
33713.2
TCGA-HP-A5N0-01A
90 years, female, stage:'--, dead, 752 days
33518.9
TCGA-FV-A3I1-01A
81 years, female, white, stage:Stage II, dead, 247 days
33328.6
TCGA-GJ-A9DB-01A
68 years, male, white, stage:Stage I, dead, 67 days
33258.7
TCGA-DD-A4NO-01A
65 years, male, white, stage:Stage I, alive, 2245 days
33220.1
TCGA-RC-A6M6-01A
75 years, male, white, stage:Stage II, alive, 9 days
33025.0
TCGA-DD-AAVQ-01A
38 years, male, asian, stage:Stage I, alive, 2728 days
32692.0
TCGA-K7-A5RF-01A
64 years, male, white, stage:Stage I, alive, 631 days
32608.6
TCGA-ZP-A9D1-01A
56 years, female, white, stage:'--, alive, 21 days
31961.8
TCGA-DD-A118-01A
77 years, female, white, stage:Stage II, alive, 3437 days
31867.8
TCGA-5C-A9VG-01A
58 years, male, white, stage:Stage II, alive, 328 days
31429.0
TCGA-BC-A10T-01A
76 years, male, white, stage:'--, dead, 837 days
31425.2
TCGA-MR-A520-01A
58 years, male, white, stage:Stage I, alive, 229 days
31422.8
TCGA-BD-A3EP-01A
75 years, female, black or african american, stage:Stage I, alive, 409 days
31033.1
TCGA-G3-A3CK-01A
61 years, male, asian, stage:Stage I, alive, 585 days
30912.0
TCGA-CC-A8HV-01A
51 years, female, asian, stage:Stage II, dead, 279 days
30887.6
TCGA-ED-A7PZ-01A
61 years, male, asian, stage:Stage II, alive, 6 days
30474.3
TCGA-DD-AAEK-01A
51 years, male, asian, stage:Stage II, alive, 1067 days
30411.2
TCGA-DD-A11D-01A
57 years, female, white, stage:Stage I, dead, 1560 days
30407.3
TCGA-DD-A4NK-01A
80 years, female, white, stage:Stage IIIA, dead, 1210 days
30356.5
TCGA-BC-A10S-01A
81 years, male, white, stage:'--, dead, 1423 days
29851.5
TCGA-K7-A5RG-01A
66 years, male, black or african american, stage:Stage I, alive, 519 days
29831.6
TCGA-XR-A8TD-01A
49 years, female, white, stage:Stage IIIB, alive, 1030 days
29433.8
TCGA-DD-A39W-01A
29 years, female, white, stage:Stage III, dead, 827 days
29355.3
TCGA-DD-AAW3-01A
69 years, male, asian, stage:Stage I, alive, 1633 days
29169.4
TCGA-DD-A1EF-01A
57 years, female, white, stage:Stage I, dead, 394 days
28701.0
TCGA-DD-AACU-01A
59 years, male, asian, stage:Stage I, alive, 1567 days
28663.0
TCGA-ZP-A9CV-01A
59 years, male, white, stage:'--, dead, 1088 days
28603.3
TCGA-G3-A5SK-01A
58 years, male, white, stage:Stage I, alive, 744 days
28317.0
TCGA-DD-AACA-01A
65 years, male, asian, stage:Stage I, alive, 2301 days
28121.4
TCGA-CC-A9FW-01A
68 years, male, asian, stage:Stage IIIA, alive, 248 days
28069.9
TCGA-FV-A4ZQ-01A
52 years, male, white, stage:Stage I, alive, 12 days
27982.2
TCGA-DD-AAEI-01A
72 years, male, asian, stage:Stage I, alive, 1531 days
27880.9
TCGA-4R-AA8I-01A
66 years, male, white, stage:Stage II, dead, 262 days
27842.4
TCGA-BD-A3ER-01A
62 years, male, white, stage:Stage II, alive, 1115 days
27459.4
TCGA-ZP-A9CY-01A
66 years, female, white, stage:'--, alive, 782 days
27455.1
TCGA-G3-A25Y-01A
52 years, female, asian, stage:Stage I, dead, 452 days
27312.8
TCGA-DD-AACD-01A
48 years, male, asian, stage:Stage I, dead, 381 days
27194.8
TCGA-DD-AAEH-01A
73 years, male, asian, stage:Stage I, alive, 784 days
26920.6
TCGA-MI-A75E-01A
61 years, male, white, stage:Stage IIIC, alive, 507 days
26823.0
TCGA-CC-A3MB-01A
36 years, male, asian, stage:Stage IIIA, dead, 315 days
26250.7
TCGA-UB-A7MF-01A
56 years, male, white, stage:Stage IIIA, dead, 214 days
26093.9
TCGA-DD-AACV-01A
53 years, male, asian, stage:Stage I, alive, 1531 days
25630.5
TCGA-RC-A7SK-01A
59 years, male, asian, stage:Stage I, alive, 472 days
25410.3
TCGA-WX-AA46-01A
61 years, male, white, stage:Stage II, alive, 756 days
25167.8
TCGA-LG-A9QC-01A
48 years, male, white, stage:Stage I, alive, 425 days
24962.5
TCGA-DD-AACN-01A
32 years, male, asian, stage:Stage I, alive, 1302 days
24812.1
TCGA-ED-A7XO-01A
29 years, male, asian, stage:Stage IIIA, alive, 427 days
24336.7
TCGA-G3-A3CH-01A
53 years, male, asian, stage:Stage IIIA, alive, 780 days
24281.5
TCGA-DD-AAD1-01A
51 years, female, asian, stage:Stage I, alive, 564 days
24265.0
TCGA-EP-A3RK-01A
73 years, male, white, stage:Stage IIIA, alive, 363 days
24069.2
TCGA-DD-A1EH-01A
23 years, male, white, stage:Stage III, alive, 1495 days
23802.3
TCGA-5R-AA1C-01A
57 years, male, white, stage:Stage II, alive, 520 days
23535.9
TCGA-UB-AA0U-01A
60 years, male, white, stage:Stage II, alive, 327 days
23476.9
TCGA-QA-A7B7-01A
48 years, male, black or african american, stage:Stage II, alive, 94 days
23378.0
TCGA-DD-AAEG-01A
59 years, female, asian, stage:Stage I, alive, 719 days
22776.6
TCGA-DD-A73A-01A
71 years, male, white, stage:Stage I, alive, 728 days
22549.8
TCGA-BC-A3KG-01A
68 years, female, white, stage:Stage II, alive, 680 days
22276.3
TCGA-DD-A1EL-01A
23 years, male, black or african american, stage:Stage II, dead, 415 days
22116.5
TCGA-DD-A114-01A
42 years, male, black or african american, stage:Stage II, dead, 1149 days
22108.6
TCGA-ZP-A9D4-01A
64 years, female, white, stage:'--, alive, 395 days
21890.4
TCGA-DD-AAE7-01A
72 years, male, asian, stage:Stage I, alive, 644 days
21811.8
TCGA-DD-A3A5-01A
66 years, female, white, stage:Stage III, dead, 3125 days
21737.3
TCGA-G3-AAV7-01A
38 years, male, asian, stage:Stage II, alive, 361 days
21713.3
TCGA-G3-A25U-01A
63 years, female, asian, stage:Stage I, alive, 1636 days
21615.4
TCGA-DD-A73F-01A
77 years, female, white, stage:Stage I, alive, 1085 days
21451.9
TCGA-DD-AAE2-01A
51 years, male, asian, stage:Stage I, alive, 638 days
21150.9
TCGA-DD-AAVX-01A
38 years, male, asian, stage:Stage II, alive, 1718 days
21081.6
TCGA-UB-AA0V-01A
69 years, female, white, stage:Stage I, alive, 314 days
21024.6
TCGA-DD-AADV-01A
50 years, male, asian, stage:Stage I, alive, 574 days
20863.7
TCGA-DD-A4NP-01A
32 years, male, white, stage:Stage I, alive, 3308 days
20713.5
TCGA-ZP-A9D2-01A
51 years, male, white, stage:'--, dead, 765 days
20623.7
TCGA-CC-A8HS-01A
18 years, male, asian, stage:Stage IIIC, dead, 300 days
20326.0
TCGA-DD-A113-01A
55 years, female, white, stage:Stage II, alive, 2425 days
20212.8
TCGA-BC-A10X-01A
52 years, female, white, stage:Stage IIIA, dead, 770 days
19706.3
TCGA-DD-A1EA-01A
68 years, male, asian, stage:Stage II, alive, 2415 days
19426.0
TCGA-ED-A459-01A
47 years, male, asian, stage:Stage II, alive, 910 days
19343.7
TCGA-G3-A7M7-01A
65 years, male, white, stage:Stage I, alive, 361 days
19043.9
TCGA-5R-AAAM-01A
65 years, female, white, stage:Stage II, dead, 46 days
18907.4
TCGA-G3-A25V-01A
68 years, male, white, stage:Stage I, alive, 860 days
18843.9
TCGA-DD-A4NS-01A
61 years, female, white, stage:Stage I, dead, 2456 days
18545.6
TCGA-DD-A4NJ-01A
54 years, female, white, stage:Stage II, alive, 928 days
18504.0
TCGA-BC-A217-01A
75 years, female, white, stage:Stage II, dead, 1397 days
18457.8
TCGA-DD-A4ND-01A
56 years, female, white, stage:Stage I, alive, 2746 days
18411.9
TCGA-BC-A110-01A
51 years, female, black or african american, stage:'--, dead, 2116 days
18366.1
TCGA-5C-AAPD-01A
61 years, male, asian, stage:Stage II, alive, 20 days
18253.9
TCGA-DD-A4NG-01A
77 years, male, white, stage:Stage IIIA, dead, 802 days
18159.2
TCGA-DD-A11C-01A
69 years, male, white, stage:Stage I, alive, 662 days
17894.4
TCGA-DD-AADW-01A
48 years, male, asian, stage:Stage I, alive, 587 days
17565.0
TCGA-CC-A5UE-01A
48 years, male, asian, stage:Stage IIIB, dead, 272 days
17062.7
TCGA-DD-AAVV-01A
56 years, male, asian, stage:Stage II, alive, 2455 days
16867.4
TCGA-ED-A66Y-01A
51 years, female, asian, stage:Stage IIIA, dead, 296 days
16529.6
TCGA-DD-A73C-01A
65 years, female, white, stage:Stage IIIA, alive, 701 days
16427.3
TCGA-2Y-A9GS-01A
58 years, male, white, stage:'--, dead, 724 days
16120.9
TCGA-DD-A4NV-01A
61 years, male, white, stage:Stage IIIA, alive, 2398 days
15734.6
TCGA-UB-A7MC-01A
59 years, male, white, stage:Stage IIIA, alive, 500 days
15153.8
TCGA-UB-A7MA-01A
62 years, female, white, stage:Stage II, alive, 848 days
14760.4
TCGA-DD-A1EE-01A
73 years, male, white, stage:Stage IIIA, dead, 349 days
14759.1
TCGA-DD-AACI-01A
69 years, male, asian, stage:Stage II, alive, 1618 days
14740.7
TCGA-XR-A8TG-01A
58 years, male, white, stage:Stage I, alive, 898 days
14626.1
TCGA-DD-A4NE-01A
75 years, female, white, stage:Stage IIIA, dead, 660 days
14351.4
TCGA-DD-AADQ-01A
59 years, male, asian, stage:Stage II, alive, 436 days
13871.2
TCGA-BC-A10W-01A
50 years, male, asian, stage:'--, dead, 91 days
13817.9
TCGA-DD-A4NI-01A
67 years, male, white, stage:Stage II, alive, 816 days
13511.0
TCGA-LG-A9QD-01A
68 years, male, white, stage:Stage IIIA, alive, 366 days
13319.6
TCGA-2Y-A9GX-01A
68 years, male, white, stage:Stage I, alive, 2442 days
13192.3
TCGA-ED-A5KG-01A
60 years, female, asian, stage:Stage II, alive, 854 days
13026.6
TCGA-CC-A3MC-01A
54 years, male, asian, stage:Stage IIIA, alive, 363 days
12958.2
TCGA-G3-A6UC-01A
65 years, male, white, stage:Stage IIIB, alive, 671 days
12954.7
TCGA-ED-A627-01A
74 years, male, white, stage:Stage I, alive, 423 days
12884.4
TCGA-2Y-A9H4-01A
68 years, male, black or african american, stage:Stage I, alive, 1452 days
12381.5
TCGA-DD-A4NL-01A
46 years, male, white, stage:Stage I, alive, 1711 days
12245.6
TCGA-CC-5261-01A
44 years, male, asian, stage:Stage II, dead, 97 days
12168.8
TCGA-G3-A7M9-01A
70 years, male, white, stage:Stage IIIB, dead, 56 days
11721.5
TCGA-2Y-A9GT-01A
51 years, male, white, stage:Stage I, dead, 1624 days
11459.3
TCGA-2Y-A9H9-01A
70 years, male, white, stage:Stage I, alive, 697 days
11395.2
TCGA-WJ-A86L-01A
68 years, female, white, stage:Stage I, alive, 345 days
10540.5
TCGA-BC-A10R-01A
66 years, female, white, stage:'--, dead, 308 days
10500.4
TCGA-2Y-A9GZ-01A
82 years, female, white, stage:Stage II, dead, 848 days
9891.6
TCGA-EP-A2KA-01A
52 years, female, white, stage:Stage IIIA, dead, 627 days
9852.1
TCGA-ED-A7PX-01A
48 years, female, asian, stage:Stage II, alive, 6 days
9827.5
TCGA-DD-A3A1-01A
65 years, male, stage:Stage IIIA, dead, 233 days
9244.4
TCGA-2Y-A9GV-01A
54 years, female, white, stage:Stage I, dead, 2532 days
8818.2
TCGA-G3-A7M8-01A
31 years, male, asian, stage:Stage I, alive, 430 days
8402.2
TCGA-DD-A1ED-01A
68 years, male, white, stage:Stage I, alive, 2301 days
8069.7
TCGA-G3-A7M6-01A
60 years, female, white, stage:Stage I, alive, 632 days
8015.5
TCGA-DD-A3A4-01A
37 years, male, white, stage:Stage IIIA, dead, 612 days
7877.6
TCGA-CC-5264-01A
71 years, male, asian, stage:Stage IIIA, dead, 102 days
6402.1
TCGA-DD-AAE0-01A
45 years, female, asian, stage:Stage IIIA, alive, 555 days
6096.1
TCGA-K7-AAU7-01A
61 years, male, white, stage:Stage II, alive, 359 days
5563.6
TCGA-G3-A25X-01A
73 years, male, asian, stage:Stage II, alive, 1779 days
5517.9
TCGA-BC-A10Y-01A
76 years, male, white, stage:'--, dead, 711 days
5362.8
TCGA-ZS-A9CF-01A
64 years, male, white, stage:Stage II, alive, 2412 days
5127.3
TCGA-DD-A73E-01A
66 years, male, white, stage:Stage I, alive, 44 days
4648.8
TCGA-G3-AAUZ-01A
48 years, male, stage:Stage I, alive, 480 days
4385.1
TCGA-UB-A7MD-01A
67 years, male, black or african american, stage:Stage I, dead, 52 days
4303.0
TCGA-5R-AA1D-01A
17 years, female, white, stage:Stage IIIA, alive, 449 days
4253.7
TCGA-DD-A115-01A
53 years, male, white, stage:Stage IIIA, dead, 2542 days
4026.6
TCGA-CC-5263-01A
35 years, male, asian, stage:Stage IIIA, dead, 129 days
3433.2
TCGA-BC-A8YO-01A
66 years, female, white, stage:Stage IIIC, alive, 562 days
3402.1
TCGA-DD-A4NB-01A
25 years, male, white, stage:Stage I, alive, 989 days
3255.8
TCGA-PD-A5DF-01A
58 years, female, white, stage:Stage IIIB, dead, 639 days
3234.9
TCGA-G3-A5SJ-01A
59 years, male, white, stage:Stage I, alive, 698 days
2759.9
TCGA-ED-A97K-01A
54 years, male, asian, stage:Stage IIIA, alive, 6 days
2666.6
TCGA-CC-A5UD-01A
45 years, male, asian, stage:Stage IIIA, dead, 304 days
2520.9
TCGA-G3-A25T-01A
45 years, female, white, stage:Stage IIIA, alive, 1553 days
2206.6
TCGA-CC-A3MA-01A
61 years, male, asian, stage:Stage IIIA, dead, 303 days
1829.4
TCGA-2Y-A9H2-01A
64 years, female, white, stage:Stage I, alive, 1731 days
1642.9
TCGA-RC-A6M5-01A
20 years, female, white, stage:Stage IVA, alive, 15 days
1311.3
TCGA-CC-A7II-01A
54 years, male, asian, stage:Stage IIIA, alive, 399 days
1135.9
TCGA-YA-A8S7-01A
68 years, male, white, stage:Stage IIIA, dead, 412 days
882.4
TCGA-DD-AACH-01A
69 years, male, asian, stage:Stage II, dead, 195 days
599.2
TCGA-DD-AA3A-01A
81 years, female, white, stage:Stage I, dead, 410 days
548.8
TCGA-MR-A8JO-01A
34 years, male, white, stage:Stage I, alive, 330 days
300.2
TCGA-WX-AA47-01A
33 years, female, white, stage:Stage IIIA, dead, 556 days
292.1
TCGA-DD-AAD5-01A
54 years, male, asian, stage:Stage I, alive, 1345 days
223.6
TCGA-CC-5260-01A
61 years, female, asian, stage:Stage IIIC, dead, 87 days
104.5
TCGA-CC-A7IJ-01A
56 years, male, asian, stage:Stage II, alive, 382 days
72.0
TCGA-ED-A82E-01A
60 years, female, asian, stage:Stage IIIA, alive, 408 days
57.5
TCGA-FV-A3I0-01A
76 years, female, white, stage:Stage II, alive, 848 days
49.6
TCGA-DD-A1EC-01A
20 years, female, white, stage:Stage I, alive, 602 days
40.8
TCGA-BC-A10Q-01A
72 years, female, white, stage:'--, dead, 1135 days
27.5
TCGA-DD-A3A6-01A
72 years, female, white, stage:Stage II, dead, 3258 days
23.0
TCGA-CC-A3M9-01A
45 years, male, asian, stage:Stage IIIA, dead, 300 days
16.2
TCGA-BC-A112-01A
80 years, male, white, stage:'--, dead, 153 days
14.6
TCGA-DD-A4NA-01A
67 years, female, white, stage:Stage IIIC, alive, 1008 days
10.0
TCGA-CC-A1HT-01A
50 years, male, asian, stage:Stage IIIA, dead, 101 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
APOA2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
39982.8
Number of samples
231
Samples
Sample
Description
pTPM
DO45241
49 years, male, NA, stage:1, alive, 1080 days
152207.0
DO45187
32 years, female, NA, stage:1, alive, 1260 days
121287.0
DO50839
47 years, female, NA, stage:3, alive, 330 days
103604.0
DO45163
76 years, male, NA, stage:2, alive, 960 days
103242.0
DO45193
68 years, female, NA, stage:4, dead, 120 days
99001.6
DO50783
62 years, male, NA, stage:3, alive, 480 days
97479.4
DO23528
45 years, female, NA, stage:2, alive, 1020 days
96095.4
DO23539
77 years, male, NA, stage:1, alive, 1110 days
95526.5
DO45117
73 years, female, NA, stage:2, dead, 1110 days
92243.1
DO23548
78 years, female, NA, stage:1, alive, 840 days
89325.9
DO45129
61 years, male, NA, stage:3, alive, 1470 days
85533.1
DO45183
72 years, female, NA, stage:2, dead, 570 days
84804.3
DO23508
79 years, female, NA, stage:2, alive, 390 days
82982.5
DO23524
71 years, female, NA, stage:2, alive, 1050 days
81718.8
DO48672
81 years, male, NA, stage:2, alive, 450 days
80012.7
DO50814
83 years, male, NA, stage:3, alive, 420 days
79393.0
DO50803
62 years, female, NA, stage:1, alive, 540 days
79146.8
DO48701
78 years, male, NA, stage:2, alive, 780 days
78782.4
DO23512
60 years, male, NA, stage:1, alive, 1260 days
78425.1
DO50789
73 years, female, NA, stage:2, alive, 570 days
78236.5
DO48697
64 years, female, NA, stage:2, dead, 810 days
77568.0
DO23529
72 years, male, NA, stage:4, alive, 930 days
75735.1
DO48751
68 years, male, NA, stage:2, dead, 480 days
75300.3
DO50811
62 years, male, NA, stage:1, alive, 450 days
75115.7
DO48741
64 years, male, NA, stage:3, alive, 240 days
74377.8
DO50844
75 years, male, NA, stage:4, alive, 300 days
72510.1
DO45149
70 years, female, NA, stage:2, alive, 1260 days
72195.5
DO45153
77 years, female, NA, stage:2, alive, 1380 days
71662.9
DO23545
67 years, male, NA, stage:2, dead, 570 days
71167.5
DO45199
86 years, female, NA, stage:2, alive, 1350 days
70173.4
DO48681
57 years, male, NA, stage:2, alive, 900 days
70102.9
DO50850
74 years, male, NA, stage:3, alive, 720 days
69355.1
DO50776
75 years, male, NA, stage:1, alive, 690 days
68488.0
DO45119
74 years, male, NA, stage:3, dead, 510 days
68452.4
DO45223
67 years, male, NA, stage:4, alive, 1020 days
67544.3
DO48706
72 years, male, NA, stage:2, alive, 870 days
67440.0
DO50817
75 years, male, NA, stage:2, alive, 390 days
67397.5
DO45125
58 years, male, NA, stage:3, alive, 1680 days
66719.2
DO45191
61 years, female, NA, stage:2, alive, 1200 days
65744.7
DO50806
70 years, male, NA, stage:4, alive, 540 days
65107.1
DO45239
42 years, male, NA, stage:2, alive, 870 days
64530.4
DO50785
37 years, male, NA, stage:4, dead, 90 days
64031.5
DO23511
83 years, female, NA, stage:3, dead, 180 days
63665.7
DO48725
66 years, male, NA, stage:1, alive, 780 days
63231.9
DO45131
53 years, male, NA, stage:4, dead, 360 days
63217.4
DO23543
63 years, male, NA, stage:2, alive, 1020 days
63110.2
DO50820
77 years, female, NA, stage:3, alive, 510 days
63003.8
DO48695
77 years, male, NA, stage:2, alive, 720 days
62645.4
DO48721
58 years, female, NA, stage:1, alive, 900 days
62452.0
DO45173
63 years, male, NA, stage:3, alive, 1170 days
62035.7
DO45115
81 years, male, NA, stage:2, alive, 840 days
61380.6
DO45171
56 years, male, NA, stage:3, alive, 600 days
61349.4
DO23516
69 years, male, NA, stage:3, dead, 20 days
61048.8
DO45269
59 years, male, NA, stage:3, alive, 750 days
60073.2
DO45105
61 years, male, NA, stage:1, alive, 1680 days
59631.2
DO23534
60 years, male, NA, stage:2, alive, 840 days
58486.1
DO45201
49 years, male, NA, stage:1, alive, 900 days
58331.8
DO45121
61 years, male, NA, stage:3, alive, 1530 days
58198.2
DO45227
57 years, female, NA, stage:2, alive, 1020 days
57407.1
DO23535
67 years, male, NA, stage:1, alive, 960 days
57165.0
DO45265
73 years, male, NA, stage:3, alive, 1020 days
56944.6
DO50857
72 years, male, NA, stage:2, alive, 210 days
55110.4
DO50793
76 years, male, NA, stage:4, alive, 540 days
55097.0
DO48736
76 years, female, NA, stage:1, alive, 600 days
54853.6
DO45247
31 years, female, NA, stage:2, alive, 210 days
54809.4
DO50804
81 years, male, NA, stage:2, alive, 720 days
54441.4
DO45167
67 years, male, NA, stage:2, dead, 1440 days
53662.9
DO45179
78 years, female, NA, stage:2, alive, 600 days
53430.0
DO23536
56 years, male, NA, stage:2, alive, 930 days
52927.7
DO48700
78 years, female, NA, stage:2, alive, 810 days
52704.2
DO23514
64 years, male, NA, stage:2, alive, 1290 days
52649.6
DO23533
61 years, male, NA, stage:2, alive, 900 days
52165.7
DO50859
77 years, male, NA, stage:2, alive, 180 days
51875.7
DO48715
58 years, female, NA, stage:2, dead, 690 days
51818.6
DO48723
73 years, male, NA, stage:1, alive, 600 days
50587.4
DO45099
46 years, male, NA, stage:3, alive, 1590 days
50578.1
DO48757
68 years, female, NA, stage:3, alive, 480 days
50074.2
DO45165
75 years, male, NA, stage:2, alive, 690 days
48547.3
DO48733
72 years, male, NA, stage:2, alive, 600 days
47963.9
DO48743
69 years, female, NA, stage:2, alive, 570 days
47589.8
DO23510
80 years, female, NA, stage:2, alive, 870 days
47446.7
DO45093
71 years, male, NA, stage:2, dead, 720 days
47099.4
DO45107
63 years, female, NA, stage:2, alive, 1710 days
46554.5
DO45161
74 years, male, NA, stage:2, dead, 540 days
46464.6
DO45137
38 years, male, NA, stage:1, alive, 1320 days
46321.7
DO50816
63 years, male, NA, stage:2, alive, 390 days
46188.8
DO45096
69 years, male, NA, stage:2, dead, 1290 days
45651.4
DO45267
73 years, male, NA, stage:3, dead, 570 days
45608.2
DO45175
74 years, male, NA, stage:2, alive, 1140 days
45591.8
DO50845
72 years, male, NA, stage:3, alive, 210 days
45294.5
DO45095
66 years, male, NA, stage:2, alive, 1620 days
45223.2
DO45092
62 years, male, NA, stage:4, dead, 1200 days
44137.2
DO45103
47 years, male, NA, stage:3, alive, 450 days
44078.2
DO45203
71 years, female, NA, stage:2, alive, 1170 days
43930.0
DO45257
46 years, male, NA, stage:3, alive, 810 days
43752.7
DO48693
71 years, male, NA, stage:2, alive, 900 days
42881.6
DO23550
69 years, male, NA, stage:1, alive, 990 days
42837.9
DO45221
75 years, female, NA, stage:4, dead, 390 days
42169.4
DO50808
68 years, male, NA, stage:2, alive, 570 days
41933.7
DO45145
78 years, male, NA, stage:3, dead, 60 days
41656.2
DO48677
58 years, male, NA, stage:3, alive, 1140 days
41453.0
DO23521
63 years, male, NA, stage:3, alive, 1110 days
41415.2
DO45243
74 years, female, NA, stage:3, alive, 930 days
40909.8
DO45091
56 years, male, NA, stage:2, dead, 1320 days
40426.7
DO48760
70 years, female, NA, stage:2, alive, 690 days
39958.8
DO23549
74 years, male, NA, stage:3, alive, 990 days
39558.7
DO227801
77 years, female, NA, stage:1, alive, 660 days
39207.0
DO45101
63 years, male, NA, stage:2, alive, 1680 days
39140.9
DO45281
83 years, male, NA, stage:4, alive, 750 days
39061.3
DO48737
52 years, male, NA, stage:1, alive, 720 days
39011.7
DO45209
70 years, male, NA, stage:4, alive, 1350 days
38826.1
DO50832
73 years, male, NA, stage:3, alive, 90 days
38506.5
DO48712
50 years, male, NA, stage:2, alive, 810 days
38120.2
DO50787
63 years, male, NA, stage:3, alive, 480 days
37949.0
DO48746
76 years, male, NA, stage:3, alive, 570 days
37811.8
DO45123
78 years, female, NA, stage:2, dead, 570 days
37562.5
DO45143
69 years, male, NA, stage:3, alive, 1290 days
37362.3
DO48674
80 years, male, NA, stage:2, alive, 1260 days
37011.7
DO45113
58 years, male, NA, stage:3, alive, 1560 days
36920.0
DO45255
81 years, male, NA, stage:3, alive, 720 days
36468.8
DO50809
56 years, male, NA, stage:3, dead, 720 days
36175.7
DO50805
72 years, male, NA, stage:2, alive, 690 days
36164.6
DO23542
66 years, male, NA, stage:3, alive, 960 days
35966.2
DO48759
73 years, male, NA, stage:3, alive, 720 days
35893.8
DO50822
66 years, male, NA, stage:2, alive, 510 days
35710.7
DO45237
58 years, male, NA, stage:2, alive, 900 days
35418.8
DO45127
73 years, male, NA, stage:3, dead, 420 days
35360.4
DO45141
73 years, male, NA, stage:2, alive, 1320 days
35101.2
DO50791
79 years, female, NA, stage:1, dead, 480 days
34120.0
DO227643
79 years, male, NA, stage:2, alive, 1260 days
33884.4
DO23532
71 years, female, NA, stage:1, alive, 960 days
33677.7
DO45213
58 years, male, NA, stage:1, alive, 1200 days
33519.0
DO23546
63 years, male, NA, stage:2, alive, 1050 days
33352.8
DO45261
74 years, male, NA, stage:3, alive, 990 days
33083.2
DO45229
74 years, male, NA, stage:1, alive, 990 days
32881.4
DO45177
81 years, female, NA, stage:3, alive, 1260 days
32761.9
DO45181
84 years, female, NA, stage:2, alive, 1200 days
31446.3
DO23517
62 years, male, NA, stage:2, alive, 1200 days
31369.7
DO48720
62 years, female, NA, stage:2, alive, 570 days
30899.5
DO50802
49 years, male, NA, stage:2, alive, 930 days
30723.3
DO50813
56 years, male, NA, stage:2, alive, 420 days
30326.1
DO45097
69 years, male, NA, stage:3, alive, 1620 days
30237.1
DO45215
65 years, male, NA, stage:2, alive, 1170 days
30212.5
DO48730
73 years, female, NA, stage:2, alive, 630 days
30130.3
DO50778
60 years, male, NA, stage:4, alive, 630 days
29676.7
DO45197
51 years, male, NA, stage:2, alive, 1170 days
29481.3
DO45225
69 years, male, NA, stage:1, alive, 1050 days
29424.0
DO48747
62 years, male, NA, stage:3, alive, 540 days
29345.7
DO23527
72 years, male, NA, stage:1, alive, 1050 days
29216.7
DO48679
72 years, male, NA, stage:2, alive, 1200 days
28799.4
DO23544
67 years, male, NA, stage:2, alive, 960 days
28792.3
DO23531
78 years, female, NA, stage:3, alive, 900 days
28226.6
DO48704
68 years, female, NA, stage:3, alive, 750 days
28118.8
DO48727
81 years, female, NA, stage:2, dead, 390 days
27839.8
DO45207
68 years, male, NA, stage:1, alive, 1050 days
27376.1
DO45109
63 years, male, NA, stage:2, alive, 1590 days
27134.7
DO45133
64 years, male, NA, stage:3, dead, 660 days
27118.7
DO45135
77 years, male, NA, stage:1, alive, 1410 days
26974.8
DO23513
76 years, male, NA, stage:3, alive, 1200 days
26942.9
DO50818
65 years, male, NA, stage:2, alive, 510 days
26748.7
DO23552
80 years, female, NA, stage:1, alive, 810 days
26329.6
DO23538
67 years, male, NA, stage:2, alive, 450 days
26053.5
DO48761
55 years, male, NA, stage:2, alive, 870 days
26050.0
DO48719
80 years, male, NA, stage:2, alive, 690 days
25650.5
DO48728
74 years, female, NA, stage:2, alive, 150 days
25633.4
DO45094
76 years, male, NA, stage:3, alive, 1650 days
25185.1
DO50799
66 years, female, NA, stage:2, alive, 540 days
24903.8
DO23525
71 years, male, NA, stage:4, alive, 1050 days
23918.4
DO45273
62 years, male, NA, stage:2, alive, 480 days
23886.1
DO50825
70 years, male, NA, stage:2, alive, 390 days
22739.1
DO45157
62 years, male, NA, stage:2, alive, 1980 days
21098.0
DO23515
71 years, male, NA, stage:2, alive, 1230 days
20350.9
DO45195
62 years, male, NA, stage:1, alive, 390 days
20118.8
DO45263
67 years, male, NA, stage:3, dead, 270 days
19959.3
DO45217
69 years, female, NA, stage:3, dead, 270 days
19694.6
DO45111
74 years, male, NA, stage:2, alive, 1590 days
19512.4
DO50774
68 years, female, NA, stage:2, alive, 720 days
19023.8
DO45159
65 years, male, NA, stage:3, alive, 1470 days
18142.9
DO48716
71 years, male, NA, stage:2, alive, 720 days
17047.0
DO50819
72 years, female, NA, stage:2, alive, 510 days
16846.6
DO23551
73 years, male, NA, stage:3, dead, 150 days
16676.3
DO48682
72 years, female, NA, stage:3, dead, 120 days
16551.2
DO45219
78 years, male, NA, stage:2, alive, 1080 days
16524.1
DO23518
67 years, male, NA, stage:2, alive, 1320 days
16221.9
DO50840
49 years, male, NA, stage:2, alive, 330 days
15744.6
DO23537
79 years, male, NA, stage:2, dead, 900 days
13713.9
DO45275
65 years, male, NA, stage:3, dead, 10 days
13673.7
DO45185
89 years, male, NA, stage:2, alive, 600 days
13376.2
DO45231
84 years, male, NA, stage:2, alive, 930 days
13159.3
DO45155
69 years, male, NA, stage:2, alive, 2160 days
12920.8
DO23547
74 years, male, NA, stage:1, alive, 1020 days
12658.6
DO23540
73 years, male, NA, stage:1, alive, 750 days
12400.4
DO48742
76 years, male, NA, stage:2, alive, 600 days
12346.0
DO50815
62 years, male, NA, stage:3, alive, 150 days
12242.2
DO23541
65 years, male, NA, stage:2, alive, 930 days
11817.1
DO45233
83 years, male, NA, stage:3, alive, 900 days
11023.4
DO45235
68 years, female, NA, stage:1, alive, 900 days
10851.7
DO45259
65 years, male, NA, stage:3, alive, 330 days
9735.4
DO23526
66 years, male, NA, stage:3, alive, 1050 days
9422.6
DO50807
67 years, male, NA, stage:1, alive, 540 days
8204.6
DO50855
47 years, male, NA, stage:2, alive, 570 days
7276.8
DO45253
50 years, male, NA, stage:2, alive, 870 days
6936.8
DO23530
53 years, male, NA, stage:4, dead, 180 days
5651.9
DO45205
67 years, female, NA, stage:2, dead, 90 days
5520.3
DO45189
85 years, female, NA, stage:2, alive, 1200 days
5431.9
DO45139
63 years, male, NA, stage:3, alive, 1320 days
5258.9
DO23509
60 years, male, NA, stage:3, dead, 780 days
5089.5
DO50798
77 years, male, NA, stage:3, dead, 30 days
4843.0
DO50800
74 years, male, NA, stage:2, alive, 510 days
4430.5
DO45169
74 years, male, NA, stage:3, alive, 1350 days
3008.1
DO45251
57 years, female, NA, stage:2, alive, 900 days
2892.0
DO45249
57 years, male, NA, stage:1, alive, 630 days
2645.7
DO48732
73 years, male, NA, stage:3, alive, 630 days
1926.3
DO50829
78 years, male, NA, stage:3, alive, 570 days
1752.5
DO48717
54 years, male, NA, stage:4, dead, 180 days
1624.8
DO45301
56 years, male, NA, stage:2, dead, 1440 days
1132.7
DO45287
74 years, male, NA, stage:1, alive, 390 days
1127.8
DO23519
65 years, male, NA, stage:3, alive, 630 days
1018.7
DO45289
78 years, female, NA, stage:3, alive, 360 days
767.2
DO45305
66 years, male, NA, stage:4, alive, 300 days
456.7
DO45283
60 years, male, NA, stage:3, alive, 510 days
275.4
DO45303
62 years, female, NA, stage:3, alive, 990 days
109.2
DO45277
64 years, male, NA, stage:3, alive, 600 days
65.6
DO45279
67 years, male, NA, stage:3, alive, 1290 days
55.7
DO45245
75 years, female, NA, stage:2, dead, 240 days
51.3
DO23523
52 years, male, NA, stage:3, alive, 1080 days
40.4
DO45285
59 years, male, NA, stage:3, alive, 480 days
21.7
DO45297
61 years, female, NA, stage:4, dead, 1260 days
21.4
DO45299
70 years, female, NA, stage:1, alive, 1440 days
8.3
DO45211
76 years, male, NA, stage:3, alive, 240 days
6.7
DO45307
54 years, female, NA, stage:4, dead, 240 days
6.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
877
Tumor
1.9
343
Tumor
1.4
135
Tumor
1.0
815
Tumor
1.0
517
Tumor
1.0
745
Tumor
0.9
671
Tumor
0.9
863
Tumor
0.9
471
Tumor
0.9
1027
Tumor
0.8
713
Tumor
0.8
817
Tumor
0.7
983
Tumor
0.7
147
Tumor
0.7
192
Normal
0.7
665
Tumor
0.7
425
Tumor
0.6
567
Tumor
0.6
125
Tumor
0.6
391
Tumor
0.5
131
Tumor
0.5
224
Normal
0.5
313
Tumor
0.5
777
Tumor
0.4
697
Tumor
0.4
851
Tumor
0.4
363
Tumor
0.4
435
Tumor
0.4
975
Tumor
0.4
921
Tumor
0.4
367
Tumor
0.4
785
Tumor
0.4
641
Tumor
0.4
743
Tumor
0.4
535
Tumor
0.3
257
Tumor
0.3
365
Tumor
0.3
685
Tumor
0.3
431
Tumor
0.3
635
Tumor
0.3
227
Tumor
0.3
663
Tumor
0.2
393
Tumor
0.2
746
Normal
0.2
563
Tumor
0.2
283
Tumor
0.2
813
Tumor
0.2
411
Tumor
0.2
368
Normal
0.2
261
Tumor
0.2
455
Tumor
0.2
112
Tumor
0.2
737
Tumor
0.2
515
Tumor
0.2
1045
Tumor
0.2
1025
Tumor
0.2
881
Tumor
0.1
951
Tumor
0.1
615
Tumor
0.1
384
Normal
0.1
311
Tumor
0.1
868
Normal
0.1
618
Normal
0.1
187
Tumor
0.1
573
Tumor
0.1
617
Tumor
0.1
461
Tumor
0.1
223
Tumor
0.1
627
Tumor
0.1
647
Tumor
0.0
977
Tumor
0.0
715
Tumor
0.0
537
Tumor
0.0
778
Normal
0.0
883
Tumor
0.0
1022
Normal
0.0
1041
Tumor
0.0
741
Tumor
0.0
878
Normal
0.0
387
Tumor
0.0
686
Normal
0.0
228
Normal
0.0
1028
Normal
0.0
915
Tumor
0.0
375
Tumor
0.0
953
Tumor
0.0
553
Tumor
0.0
857
Tumor
0.0
491
Tumor
0.0
474
Normal
0.0
221
Tumor
0.0
444
Normal
0.0
744
Normal
0.0
823
Tumor
-0.1
1043
Tumor
-0.1
523
Tumor
-0.1
858
Normal
-0.1
232
Normal
-0.1
527
Tumor
-0.1
331
Tumor
-0.1
488
Normal
-0.1
145
Tumor
-0.1
462
Normal
-0.1
421
Tumor
-0.1
672
Normal
-0.1
642
Normal
-0.1
328
Normal
-0.1
416
Normal
-0.1
341
Tumor
-0.1
636
Normal
-0.1
816
Normal
-0.1
862
Normal
-0.1
914
Normal
-0.1
366
Normal
-0.1
271
Tumor
-0.1
724
Normal
-0.1
1021
Tumor
-0.1
396
Normal
-0.1
297
Tumor
-0.1
911
Tumor
-0.1
142
Normal
-0.1
728
Normal
-0.1
884
Normal
-0.1
277
Tumor
-0.1
327
Tumor
-0.1
661
Tumor
-0.1
477
Tumor
-0.2
312
Normal
-0.2
126
Normal
-0.2
824
Normal
-0.2
864
Normal
-0.2
564
Normal
-0.2
738
Normal
-0.2
538
Normal
-0.2
472
Normal
-0.2
447
Tumor
-0.2
616
Normal
-0.2
874
Normal
-0.2
967
Tumor
-0.2
882
Normal
-0.2
466
Normal
-0.2
966
Normal
-0.2
695
Tumor
-0.2
568
Normal
-0.2
361
Tumor
-0.2
487
Tumor
-0.2
354
Normal
-0.2
866
Normal
-0.2
385
Tumor
-0.2
648
Normal
-0.2
388
Normal
-0.2
344
Normal
-0.2
982
Normal
-0.2
916
Normal
-0.2
964
Normal
-0.2
1031
Tumor
-0.2
722
Normal
-0.2
285
Tumor
-0.2
867
Tumor
-0.2
534
Normal
-0.2
146
Normal
-0.2
494
Normal
-0.2
424
Normal
-0.2
516
Normal
-0.2
938
Normal
-0.2
1032
Normal
-0.2
217
Tumor
-0.2
186
Normal
-0.2
364
Normal
-0.3
957
Tumor
-0.3
464
Normal
-0.3
148
Normal
-0.3
1042
Normal
-0.3
132
Normal
-0.3
231
Tumor
-0.3
386
Normal
-0.3
965
Tumor
-0.3
557
Tumor
-0.3
448
Normal
-0.3
533
Tumor
-0.3
258
Normal
-0.3
124
Normal
-0.3
873
Tumor
-0.3
267
Tumor
-0.3
362
Normal
-0.3
536
Normal
-0.3
924
Normal
-0.3
481
Tumor
-0.3
723
Tumor
-0.3
342
Normal
-0.3
958
Normal
-0.3
721
Tumor
-0.3
922
Normal
-0.3
574
Normal
-0.3
483
Tumor
-0.3
262
Normal
-0.3
351
Tumor
-0.3
513
Tumor
-0.3
185
Tumor
-0.3
111
Normal
-0.3
272
Normal
-0.3
571
Tumor
-0.3
546
Normal
-0.3
727
Tumor
-0.3
136
Normal
-0.3
376
Normal
-0.3
852
Normal
-0.3
482
Normal
-0.3
191
Tumor
-0.3
818
Normal
-0.3
356
Normal
-0.3
956
Normal
-0.3
456
Normal
-0.3
696
Normal
-0.3
861
Tumor
-0.3
716
Normal
-0.4
128
Normal
-0.4
514
Normal
-0.4
138
Normal
-0.4
137
Tumor
-0.4
976
Normal
-0.4
666
Normal
-0.4
196
Normal
-0.4
171
Tumor
-0.4
213
Tumor
-0.4
268
Normal
-0.4
172
Normal
-0.4
572
Normal
-0.4
478
Normal
-0.4
714
Normal
-0.4
1016
Normal
-0.4
786
Normal
-0.4
923
Tumor
-0.4
428
Normal
-0.4
912
Normal
-0.4
756
Normal
-0.4
445
Tumor
-0.4
433
Tumor
-0.4
286
Normal
-0.4
314
Normal
-0.4
952
Normal
-0.4
628
Normal
-0.4
452
Normal
-0.4
984
Normal
-0.4
463
Tumor
-0.4
383
Tumor
-0.4
123
Tumor
-0.4
113
Tumor
-0.4
1046
Normal
-0.4
141
Tumor
-0.4
278
Normal
-0.4
498
Normal
-0.4
742
Normal
-0.4
755
Tumor
-0.4
355
Tumor
-0.5
558
Normal
-0.5
188
Normal
-0.5
918
Normal
-0.5
412
Normal
-0.5
415
Tumor
-0.5
545
Tumor
-0.5
353
Tumor
-0.5
434
Normal
-0.5
917
Tumor
-0.5
968
Normal
-0.5
392
Normal
-0.5
1026
Normal
-0.5
426
Normal
-0.5
698
Normal
-0.5
413
Tumor
-0.5
465
Tumor
-0.5
114
Normal
-0.5
432
Normal
-0.5
222
Normal
-0.5
492
Normal
-0.5
298
Normal
-0.5
664
Normal
-0.5
963
Tumor
-0.5
1015
Tumor
-0.5
127
Tumor
-0.5
394
Normal
-0.5
195
Tumor
-0.5
913
Tumor
-0.5
212
Normal
-0.5
518
Normal
-0.6
525
Tumor
-0.6
662
Normal
-0.6
468
Normal
-0.6
395
Tumor
-0.6
814
Normal
-0.6
1014
Normal
-0.6
484
Normal
-0.6
954
Normal
-0.6
414
Normal
-0.6
214
Normal
-0.6
451
Tumor
-0.6
944
Normal
-0.6
284
Normal
-0.6
926
Normal
-0.6
526
Normal
-0.6
981
Tumor
-0.6
162
Normal
-0.6
955
Tumor
-0.6
493
Tumor
-0.6
528
Normal
-0.6
446
Normal
-0.6
978
Normal
-0.7
357
Tumor
-0.7
352
Normal
-0.7
865
Tumor
-0.7
436
Normal
-0.7
1044
Normal
-0.7
332
Normal
-0.7
423
Tumor
-0.7
358
Normal
-0.7
473
Tumor
-0.7
467
Tumor
-0.7
422
Normal
-0.7
554
Normal
-0.8
524
Normal
-0.8
443
Tumor
-0.8
218
Normal
-0.8
925
Tumor
-0.8
161
Tumor
-0.9
943
Tumor
-0.9
1013
Tumor
-1.0
937
Tumor
-1.0
497
Tumor
-1.0
427
Tumor
-1.1
211
Tumor
-1.2
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.