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IFNGR2
HPA
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  • IFNGR2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

IFNGR2
Synonyms AF-1, IFNGT1
Gene descriptioni

Full gene name according to HGNC.

Interferon gamma receptor 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
FDA approved drug targets
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 21
Cytoband q22.11
Chromosome location (bp) 33403413 - 33479348
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000159128 (version 109)
Entrez gene 3460
HGNC HGNC:5440
UniProt P38484 (UniProt - Evidence at protein level)
neXtProt NX_P38484
GeneCards IFNGR2
Antibodypedia IFNGR2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Associates with IFNGR1 to form a receptor for the cytokine interferon gamma (IFNG) 1, 2, 3. Ligand binding stimulates activation of the JAK/STAT signaling pathway 4, 5, 6. Required for signal transduction in contrast to other receptor subunit responsible for ligand binding 7.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Receptor
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene (IFNGR2) encodes the non-ligand-binding beta chain of the gamma interferon receptor. Human interferon-gamma receptor is a heterodimer of IFNGR1 and IFNGR2. Defects in IFNGR2 are a cause of mendelian susceptibility to mycobacterial disease (MSMD), also known as familial disseminated atypical mycobacterial infection. MSMD is a genetically heterogeneous disease with autosomal recessive, autosomal dominant or X-linked inheritance. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
IFNGR2-201
ENSP00000290219
ENST00000290219
P38484
[Direct mapping] Interferon gamma receptor 2
Show all
A8K881
[Target identity:100%; Query identity:100%] Interferon gamma receptor 2 (Interferon gamma transducer 1), isoform CRA_a; cDNA FLJ78008, highly similar to Human clone pSK1 interferon gamma receptor accessory factor-1 (AF-1) mRNA; cDNA, FLJ94659, highly similar to Homo sapiens interferon gamma receptor 2 (interferon gammatransducer 1) (IFNGR2), mRNA
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Disease related genes
FDA approved drug targets
   Biotech drugs
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0001774 [microglial cell activation]
GO:0004896 [cytokine receptor activity]
GO:0004906 [interferon-gamma receptor activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0007166 [cell surface receptor signaling pathway]
GO:0009615 [response to virus]
GO:0016020 [membrane]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0030659 [cytoplasmic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0051607 [defense response to virus]
GO:0060333 [type II interferon-mediated signaling pathway]
GO:0098586 [cellular response to virus]
GO:1904783 [positive regulation of NMDA glutamate receptor activity]
Show all
337 aa
37.8 kDa
Yes 1
IFNGR2-202
ENSP00000371425
ENST00000381995
E7EUY1
[Direct mapping] Interferon gamma receptor 2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0016020 [membrane]
Show all
356 aa
40 kDa
Yes 1
IFNGR2-203
ENSP00000385044
ENST00000405436
B5MCZ0
[Direct mapping] Interferon gamma receptor 2; Interferon gamma receptor 2 (Interferon gamma transducer 1), isoform CRA_b
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0016020 [membrane]
Show all
258 aa
29 kDa
No 1
IFNGR2-204
ENSP00000402629
ENST00000421802
H7C1V5
[Direct mapping] Interferon gamma receptor 2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
Show all
60 aa
6.6 kDa
No 1
IFNGR2-207
ENSP00000512835
ENST00000696724
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
Show all
334 aa
37.4 kDa
No 1

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