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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
131.5
nTPM
GTEx:
131.5
nTPM
FANTOM5:
96.9
Scaled Tags Per Million
Pig:
46.0
nTPM
Mouse:
488.3
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
131.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 131.5
Samples: 105
Max nTPM: 168.2
Min nTPM: 90.5
Std nTPM: 18.7
Median nTPM:
229_1
69 years, female
168.2
322_1
76 years, male
162.6
246_1
77 years, male
162.1
405_1
91 years, male
161.5
316_1
62 years, male
161.4
266_1
85 years, male
161.3
35_1
74 years, female
161.2
375_1
74 years, female
159.7
389_1
86 years, female
158.5
386_1
76 years, male
157.5
319_1
81 years, male
155.5
237_1
82 years, male
155.1
126_1
63 years, male
154.6
425_1
59 years, female
154.6
377_1
82 years, female
154.3
324_1
76 years, male
153.9
6_1
73 years, female
153.3
347_1
72 years, male
153.2
352_1
62 years, male
152.0
406_1
79 years, male
150.1
526_1
61 years, male
149.7
518_1
75 years, female
149.0
415_1
77 years, female
148.3
376_1
75 years, female
147.8
292_1
71 years, male
147.6
251_1
78 years, male
146.8
2_1
77 years, female
146.4
335_1
73 years, female
146.3
189_1
76 years, male
145.8
163_1
78 years, male
144.5
414_1
84 years, female
144.1
447_1
81 years, male
142.7
18_1
88 years, male
141.3
172_1
72 years, female
141.0
265_1
87 years, male
140.2
321_1
62 years, female
139.7
404_1
82 years, female
139.6
218_1
71 years, female
139.2
384_1
83 years, male
138.7
9_1
66 years, female
138.6
286_1
68 years, female
138.0
379_1
60 years, male
137.7
495_1
57 years, female
136.7
307_1
66 years, female
136.3
293_1
68 years, female
135.5
153_1
70 years, female
135.2
117_1
61 years, male
135.0
466_1
57 years, female
134.0
81_1
67 years, male
133.9
177_1
74 years, male
132.4
480_1
63 years, male
132.2
115_1
83 years, male
131.8
217_1
76 years, male
131.7
499_1
55 years, female
130.4
468_1
89 years, male
130.3
315_1
62 years, female
129.7
17_1
71 years, male
129.6
320_1
89 years, female
129.5
162_1
79 years, female
129.4
137_1
83 years, male
128.8
311_1
78 years, male
128.3
318_1
68 years, male
127.8
355_1
70 years, female
127.5
354_1
81 years, female
124.8
32_1
67 years, male
124.5
99_1
64 years, male
124.4
313_1
79 years, female
124.3
243_1
75 years, male
124.0
349_1
83 years, male
124.0
396_1
62 years, male
123.8
145_1
84 years, male
123.7
503_1
68 years, male
123.7
139_1
64 years, female
121.9
394_1
75 years, female
121.7
413_1
59 years, female
121.5
348_1
84 years, male
120.3
350_1
84 years, female
119.9
490_1
67 years, female
118.9
517_1
88 years, male
117.8
41_1
94 years, female
117.7
142_1
61 years, female
117.6
43_1
64 years, female
117.1
173_1
67 years, male
117.1
42_1
85 years, male
116.7
353_1
82 years, female
116.0
254_1
77 years, female
115.5
149_1
88 years, male
114.7
264_1
73 years, female
113.6
109_1
81 years, female
113.1
356_1
87 years, female
110.6
4_1
88 years, female
110.3
288_1
66 years, female
108.9
120_1
70 years, female
108.3
317_1
60 years, male
106.8
351_1
91 years, male
103.7
291_1
76 years, male
102.6
295_1
61 years, female
100.6
452_1
88 years, female
100.3
119_1
70 years, female
98.6
89_1
63 years, male
97.9
501_1
88 years, male
96.3
506_1
65 years, male
95.6
308_1
70 years, female
93.0
491_1
89 years, female
93.0
314_1
67 years, male
90.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
