We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
297.3
nTPM
FANTOM5:
209.9
Scaled Tags Per Million
Pig:
100.7
nTPM
Allen mouse:
6.4
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
297.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 127.7
1984
Male, age 76, both hemispheres
147.3
2301
Female, age 85, both hemispheres
142.2
2188
Female, age 91, both hemispheres
121.2
2090
Male, age 80, both hemispheres
99.9
Dorsal cochlear nucleus nTPM: 131.5
2058
Male, age 76, both hemispheres
164.1
2370
Male, age 61, both hemispheres
138.7
2187
Female, age 91, both hemispheres
125.0
2802
Male, age 74, right hemisphere
121.3
2378
Male, age 80, both hemispheres
108.7
Dorsal tegmental nucleus nTPM: 144.3
2083
Male, age 80, both hemispheres
169.1
1936
Male, age 76, left hemisphere
152.9
2358
Male, age 61, both hemispheres
145.0
2326
Male, age 74, both hemispheres
110.4
Dorsolateral tegmental area nTPM: 131.8
2654
Male, age 80, both hemispheres
163.7
2141
Male, age 76, both hemispheres
160.3
2751
Female, age 85, both hemispheres
133.2
2360
Male, age 74, both hemispheres
108.7
2337
Male, age 61, both hemispheres
93.0
Kolliker-Fuse nucleus nTPM: 159.0
2163
Male, age 80, both hemispheres
230.0
2793
Female, age 91, left hemisphere
160.5
2315
Male, age 76, right hemisphere
86.4
Lateral lemniscal nuclei nTPM: 251.1
2453
Male, age 74, right hemisphere
300.7
2169
Male, age 76, both hemispheres
290.7
2036
Male, age 80, both hemispheres
265.1
2746
Female, age 85, left hemisphere
204.5
2320
Female, age 91, left hemisphere
194.3
Lateral parabrachial nucleus nTPM: 171.0
2139
Female, age 85, right hemisphere
247.2
2790
Male, age 61, both hemispheres
209.8
2013
Male, age 80, both hemispheres
160.7
2792
Male, age 76, both hemispheres
66.1
Lateral vestibular nucleus nTPM: 202.3
2184
Male, age 76, both hemispheres
271.9
2311
Male, age 80, both hemispheres
132.7
Locus coeruleus nTPM: 297.3
2123
Female, age 91, both hemispheres
350.2
1980
Male, age 76, both hemispheres
342.4
2014
Male, age 55, unknown
313.7
2720
Male, age 74, both hemispheres
301.1
2317
Female, age 72, unknown
300.1
2162
Male, age 80, both hemispheres
256.9
2788
Male, age 74, unknown
216.6
Medial parabrachial nucleus nTPM: 160.2
2156
Male, age 61, both hemispheres
221.3
2786
Male, age 76, both hemispheres
170.6
2854
Male, age 80, both hemispheres
160.2
2463
Female, age 85, right hemisphere
125.8
2170
Female, age 91, both hemispheres
123.3
Medial periolivary nuclei nTPM: 218.3
2171
Female, age 85, both hemispheres
305.9
2063
Male, age 76, both hemispheres
271.9
2791
Male, age 74, right hemisphere
201.2
2458
Female, age 91, both hemispheres
171.6
2081
Male, age 80, both hemispheres
141.1
Motor facial nucleus nTPM: 235.2
2062
Male, age 76, both hemispheres
319.8
2327
Male, age 80, both hemispheres
267.1
2365
Male, age 74, right hemisphere
239.9
2795
Female, age 91, both hemispheres
227.5
2697
Female, age 85, both hemispheres
179.3
2126
Male, age 61, both hemispheres
177.5
Motor trigeminal nucleus nTPM: 190.6
2560
Male, age 74, both hemispheres
251.9
2079
Male, age 80, both hemispheres
228.5
2335
Male, age 61, both hemispheres
179.5
2309
Male, age 76, both hemispheres
153.8
2321
Female, age 91, both hemispheres
139.3
Nuclei of the trapezoid body nTPM: 274.1
2159
Male, age 61, both hemispheres
352.7
2735
Female, age 85, both hemispheres
315.1
1983
Male, age 76, both hemispheres
270.9
2368
Female, age 91, both hemispheres
227.5
2166
Male, age 80, both hemispheres
204.1
Nucleus raphe magnus nTPM: 292.7
2160
Male, age 61, both hemispheres
449.6
2172
Female, age 85, both hemispheres
334.9
2455
Male, age 74, both hemispheres
311.9
2328
Male, age 80, both hemispheres
237.4
2051
Male, age 76, both hemispheres
224.5
2459
Female, age 91, both hemispheres
198.0
Paramedian reticular nucleus nTPM: 190.9
2313
Male, age 61, both hemispheres
227.9
2050
Female, age 85, both hemispheres
217.0
2057
Male, age 80, both hemispheres
213.2
2052
Male, age 76, both hemispheres
105.5
Pedunculopontine tegmental nucleus nTPM: 156.9
2334
Male, age 80, both hemispheres
185.9
1921
Female, age 85, both hemispheres
161.9
2338
Male, age 61, both hemispheres
122.9
Pontine nuclei nTPM: 256.5
2727
Male, age 61, right hemisphere
391.3
2787
Female, age 85, both hemispheres
338.2
1863
Male, age 55, unknown
291.8
1968
Male, age 76, left hemisphere
286.5
2109
Female, age 72, unknown
250.4
2115
Male, age 80, left hemisphere
181.9
2454
Male, age 74, left hemisphere
180.4
2319
Female, age 91, both hemispheres
131.4
Pontine raphe nucleus nTPM: 215.2
2122
Female, age 85, midline
252.0
2853
Male, age 76, midline
178.4
Posteroventral cochlear nucleus nTPM: 122.9
2752
Female, age 85, both hemispheres
199.7
2070
Male, age 76, both hemispheres
152.4
2371
Male, age 61, both hemispheres
143.0
2341
Male, age 80, both hemispheres
71.6
2135
Female, age 91, both hemispheres
47.6
Principal sensory trigeminal nucleus nTPM: 263.1
2158
Male, age 61, both hemispheres
400.8
2008
Male, age 80, left hemisphere
274.1
2324
Male, age 76, both hemispheres
227.8
2367
Female, age 91, left hemisphere
149.6
Reticular pontine nucleus, caudal nTPM: 189.5
2332
Male, age 80, right hemisphere
279.4
2092
Male, age 76, both hemispheres
198.9
2457
Female, age 91, both hemispheres
157.0
2559
Male, age 74, both hemispheres
122.8
Reticular pontine nucleus, oral nTPM: 173.9
2361
Male, age 74, both hemispheres
214.8
2012
Female, age 85, both hemispheres
208.7
1939
Male, age 80, both hemispheres
156.3
2167
Male, age 76, both hemispheres
149.3
2366
Female, age 91, both hemispheres
140.4
Reticulotegmental nucleus nTPM: 186.4
2325
Male, age 76, both hemispheres
222.8
2452
Male, age 74, both hemispheres
193.4
2333
Male, age 80, both hemispheres
176.5
2322
Female, age 91, both hemispheres
152.7
Spinal trigeminal nucleus, oral nTPM: 188.4
2164
Male, age 80, both hemispheres
218.0
2737
Female, age 85, both hemispheres
188.7
1978
Male, age 76, both hemispheres
158.5
Subcoeruleus area nTPM: 178.1
2089
Male, age 76, left hemisphere
231.9
2323
Female, age 91, left hemisphere
202.0
1958
Male, age 80, both hemispheres
194.4
2451
Male, age 74, both hemispheres
158.1
2369
Female, age 85, left hemisphere
104.4
Superior olive nTPM: 214.6
1875
Female, age 85, both hemispheres
249.4
2329
Male, age 80, right hemisphere
221.5
2561
Female, age 91, both hemispheres
211.5
2364
Male, age 74, right hemisphere
197.6
2020
Male, age 76, both hemispheres
192.8
Ventral periolivary nuclei nTPM: 244.2
2130
Female, age 85, both hemispheres
320.5
2165
Male, age 80, both hemispheres
271.0
2794
Female, age 91, left hemisphere
225.5
2023
Male, age 76, both hemispheres
159.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 205.8
2449
Male, age 74, both hemispheres
279.6
1959
Male, age 76, both hemispheres
227.0
2161
Male, age 80, both hemispheres
215.7
2456
Female, age 91, both hemispheres
176.8
2359
Male, age 61, both hemispheres
169.7
2840
Female, age 85, both hemispheres
165.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
100.7
Pig sample
Sample description
nTPM
Pons nTPM: 100.7
Samples: 4
Max nTPM: 121.7
Min nTPM: 90.3
Sample A
Female
121.7
Sample B
Female
90.3
Sample C
Male
93.9
Sample D
Male
96.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
