Expression of PSMB4 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

PSMB4 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 527.15

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

441.0

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	2967.9
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	1217.2
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	1198.7
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	1099.9
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	1049.2
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	1022.7
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	991.4
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	990.2
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	978.4
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	946.4
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	931.2
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	930.4
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	844.9
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	844.7
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	817.9
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	806.2
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	802.5
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	800.8
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	794.3
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	792.7
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	779.7
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	755.2
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	738.1
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	733.8
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	725.7
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	717.5
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	714.1
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	712.9
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	712.7
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	700.2
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	696.8
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	686.4
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	677.8
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	667.2
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	652.2
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	647.3
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	644.7
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	641.1
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	639.6
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	634.9
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	633.9
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	631.8
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	629.4
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	624.0
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	618.9
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	618.5
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	618.1
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	616.7
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	615.7
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	614.2
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	612.7
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	612.0
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	607.8
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	607.4
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	607.3
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	607.3
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	606.5
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	602.8
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	600.3
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	594.9
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	590.4
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	589.3
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	587.2
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	584.1
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	582.5
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	575.5
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	572.2
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	570.2
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	568.2
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	567.6
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	560.7
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	556.5
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	556.1
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	552.6
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	550.8
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	543.9
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	540.3
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	537.5
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	537.4
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	535.3
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	534.8
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	534.2
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	531.8
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	531.2
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	528.1
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	527.1
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	525.2
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	524.8
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	524.1
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	520.7
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	520.5
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	520.4
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	516.3
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	515.6
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	510.5
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	510.0
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	507.4
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	506.4
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	505.4
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	504.9
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	504.4
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	501.7
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	500.3
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	497.4
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	496.5
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	495.4
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	493.7
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	493.0
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	492.8
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	492.5
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	486.5
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	486.2
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	480.8
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	480.5
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	477.7
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	477.3
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	476.2
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	476.2
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	474.5
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	473.6
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	471.5
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	469.0
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	466.3
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	465.2
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	465.1
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	463.4
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	463.1
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	462.8
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	462.7
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	462.3
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	461.7
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	460.9
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	457.6
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	456.6
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	451.7
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	450.7
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	450.3
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	450.2
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	449.5
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	448.2
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	447.7
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	446.0
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	443.5
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	442.9
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	441.8
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	441.4
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	440.9
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	437.7
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	436.6
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	436.1
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	435.3
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	435.1
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	433.2
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	431.8
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	430.0
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	430.0
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	429.8
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	429.7
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	429.4
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	428.0
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	427.8
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	426.2
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	423.3
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	422.8
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	420.2
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	420.1
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	419.9
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	417.8
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	416.8
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	416.6
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	416.6
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	416.1
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	415.8
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	415.6
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	413.0
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	412.6
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	411.7
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	411.5
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	410.9
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	409.9
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	409.8
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	409.4
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	408.6
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	408.6
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	408.2
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	407.1
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	407.0
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	406.8
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	406.4
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	405.9
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	404.4
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	403.3
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	401.8
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	400.9
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	399.6
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	399.4
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	399.1
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	395.7
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	394.0
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	393.6
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	389.4
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	389.2
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	388.0
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	386.3
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	383.3
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	381.5
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	380.0
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	378.2
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	378.1
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	375.7
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	375.0
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	373.9
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	373.8
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	369.1
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	369.0
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	366.3
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	364.5
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	363.5
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	363.5
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	363.4
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	363.3
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	361.5
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	360.3
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	359.5
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	359.3
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	358.5
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	358.4
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	356.1
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	353.3
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	352.9
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	351.9
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	350.3
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	347.8
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	343.4
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	342.7
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	341.6
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	340.9
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	340.6
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	339.7
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	338.9
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	338.5
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	335.2
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	333.6
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	332.2
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	331.3
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	330.7
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	330.4
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	328.3
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	327.2
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	326.8
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	326.1
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	325.5
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	325.2
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	324.8
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	319.8
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	317.5
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	317.2
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	315.9
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	315.6
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	315.1
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	314.6
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	313.1
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	312.1
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	310.1
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	308.5
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	308.1
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	308.1
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	307.6
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	307.4
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	306.2
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	306.1
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	305.7
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	305.5
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	305.4
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	303.8
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	303.0
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	302.7
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	302.4
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	302.0
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	300.7
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	299.9
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	299.3
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	298.0
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	298.0
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	296.4
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	296.3
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	296.2
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	296.1
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	293.2
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	292.3
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	292.3
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	292.0
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	291.9
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	287.4
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	285.9
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	283.0
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	282.7
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	281.5
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	279.4
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	275.2
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	270.8
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	270.5
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	269.2
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	267.8
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	266.3
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	265.5
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	265.0
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	264.1
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	262.9
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	261.9
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	260.1
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	258.4
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	255.6
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	253.6
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	251.2
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	250.0
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	249.7
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	246.8
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	246.1
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	243.7
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	241.5
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	240.0
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	239.5
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	239.2
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	238.5
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	236.8
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	235.6
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	235.5
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	232.4
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	231.4
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	229.6
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	228.8
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	226.8
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	226.2
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	224.8
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	220.4
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	219.9
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	219.6
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	216.4
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	215.6
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	210.7
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	209.3
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	207.0
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	202.7
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	202.1
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	197.2
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	195.3
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	195.1
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	194.4
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	194.3
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	191.3
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	189.0
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	188.0
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	187.4
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	186.8
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	184.2
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	179.1
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	171.3
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	170.8
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	170.2
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	166.4
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	159.9
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

PSMB4 is not prognostic in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 375.71

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

488.2

Number of samples

231

Samples

Sample	Description	pTPM
DO50791	79 years, female, NA, stage:1, dead, 480 days	1572.2
DO45275	65 years, male, NA, stage:3, dead, 10 days	1338.2
DO45277	64 years, male, NA, stage:3, alive, 600 days	1237.6
DO48747	62 years, male, NA, stage:3, alive, 540 days	1169.5
DO45209	70 years, male, NA, stage:4, alive, 1350 days	1166.8
DO50783	62 years, male, NA, stage:3, alive, 480 days	1050.2
DO48732	73 years, male, NA, stage:3, alive, 630 days	1043.0
DO50829	78 years, male, NA, stage:3, alive, 570 days	1032.7
DO23521	63 years, male, NA, stage:3, alive, 1110 days	994.2
DO45251	57 years, female, NA, stage:2, alive, 900 days	955.7
DO23526	66 years, male, NA, stage:3, alive, 1050 days	925.0
DO45185	89 years, male, NA, stage:2, alive, 600 days	905.7
DO23508	79 years, female, NA, stage:2, alive, 390 days	870.9
DO45287	74 years, male, NA, stage:1, alive, 390 days	856.2
DO48737	52 years, male, NA, stage:1, alive, 720 days	851.9
DO45301	56 years, male, NA, stage:2, dead, 1440 days	846.4
DO45205	67 years, female, NA, stage:2, dead, 90 days	841.1
DO23525	71 years, male, NA, stage:4, alive, 1050 days	802.8
DO45253	50 years, male, NA, stage:2, alive, 870 days	793.6
DO48704	68 years, female, NA, stage:3, alive, 750 days	785.8
DO23537	79 years, male, NA, stage:2, dead, 900 days	783.0
DO23529	72 years, male, NA, stage:4, alive, 930 days	777.2
DO48741	64 years, male, NA, stage:3, alive, 240 days	766.7
DO45249	57 years, male, NA, stage:1, alive, 630 days	755.4
DO50839	47 years, female, NA, stage:3, alive, 330 days	752.2
DO23541	65 years, male, NA, stage:2, alive, 930 days	749.4
DO50799	66 years, female, NA, stage:2, alive, 540 days	749.2
DO45145	78 years, male, NA, stage:3, dead, 60 days	746.1
DO45092	62 years, male, NA, stage:4, dead, 1200 days	738.0
DO23514	64 years, male, NA, stage:2, alive, 1290 days	731.4
DO50811	62 years, male, NA, stage:1, alive, 450 days	725.9
DO45267	73 years, male, NA, stage:3, dead, 570 days	711.7
DO45261	74 years, male, NA, stage:3, alive, 990 days	691.0
DO45307	54 years, female, NA, stage:4, dead, 240 days	690.2
DO45171	56 years, male, NA, stage:3, alive, 600 days	689.5
DO45095	66 years, male, NA, stage:2, alive, 1620 days	688.3
DO45257	46 years, male, NA, stage:3, alive, 810 days	686.1
DO45159	65 years, male, NA, stage:3, alive, 1470 days	684.5
DO50850	74 years, male, NA, stage:3, alive, 720 days	681.8
DO23513	76 years, male, NA, stage:3, alive, 1200 days	673.7
DO45119	74 years, male, NA, stage:3, dead, 510 days	662.5
DO45115	81 years, male, NA, stage:2, alive, 840 days	662.3
DO48697	64 years, female, NA, stage:2, dead, 810 days	655.9
DO48672	81 years, male, NA, stage:2, alive, 450 days	655.4
DO23516	69 years, male, NA, stage:3, dead, 20 days	651.5
DO45279	67 years, male, NA, stage:3, alive, 1290 days	646.1
DO45163	76 years, male, NA, stage:2, alive, 960 days	645.7
DO48746	76 years, male, NA, stage:3, alive, 570 days	636.8
DO48723	73 years, male, NA, stage:1, alive, 600 days	627.5
DO48717	54 years, male, NA, stage:4, dead, 180 days	622.0
DO45299	70 years, female, NA, stage:1, alive, 1440 days	621.5
DO45097	69 years, male, NA, stage:3, alive, 1620 days	618.6
DO23539	77 years, male, NA, stage:1, alive, 1110 days	618.1
DO45139	63 years, male, NA, stage:3, alive, 1320 days	614.6
DO50800	74 years, male, NA, stage:2, alive, 510 days	611.3
DO45225	69 years, male, NA, stage:1, alive, 1050 days	602.8
DO45273	62 years, male, NA, stage:2, alive, 480 days	600.6
DO45259	65 years, male, NA, stage:3, alive, 330 days	600.5
DO48706	72 years, male, NA, stage:2, alive, 870 days	598.2
DO45263	67 years, male, NA, stage:3, dead, 270 days	587.0
DO45199	86 years, female, NA, stage:2, alive, 1350 days	585.6
DO45237	58 years, male, NA, stage:2, alive, 900 days	585.0
DO48700	78 years, female, NA, stage:2, alive, 810 days	564.4
DO45155	69 years, male, NA, stage:2, alive, 2160 days	561.9
DO23548	78 years, female, NA, stage:1, alive, 840 days	561.5
DO48695	77 years, male, NA, stage:2, alive, 720 days	560.8
DO50798	77 years, male, NA, stage:3, dead, 30 days	550.4
DO45235	68 years, female, NA, stage:1, alive, 900 days	549.2
DO23524	71 years, female, NA, stage:2, alive, 1050 days	542.9
DO45213	58 years, male, NA, stage:1, alive, 1200 days	542.1
DO50844	75 years, male, NA, stage:4, alive, 300 days	540.6
DO50814	83 years, male, NA, stage:3, alive, 420 days	538.4
DO48701	78 years, male, NA, stage:2, alive, 780 days	537.9
DO50805	72 years, male, NA, stage:2, alive, 690 days	537.7
DO23533	61 years, male, NA, stage:2, alive, 900 days	534.3
DO23518	67 years, male, NA, stage:2, alive, 1320 days	534.2
DO45281	83 years, male, NA, stage:4, alive, 750 days	532.2
DO45283	60 years, male, NA, stage:3, alive, 510 days	530.2
DO23515	71 years, male, NA, stage:2, alive, 1230 days	527.6
DO45219	78 years, male, NA, stage:2, alive, 1080 days	527.3
DO45121	61 years, male, NA, stage:3, alive, 1530 days	525.3
DO23542	66 years, male, NA, stage:3, alive, 960 days	525.2
DO23543	63 years, male, NA, stage:2, alive, 1020 days	518.6
DO50815	62 years, male, NA, stage:3, alive, 150 days	516.7
DO23509	60 years, male, NA, stage:3, dead, 780 days	515.1
DO227801	77 years, female, NA, stage:1, alive, 660 days	512.0
DO45099	46 years, male, NA, stage:3, alive, 1590 days	508.8
DO50806	70 years, male, NA, stage:4, alive, 540 days	503.7
DO23519	65 years, male, NA, stage:3, alive, 630 days	500.6
DO48736	76 years, female, NA, stage:1, alive, 600 days	496.1
DO23528	45 years, female, NA, stage:2, alive, 1020 days	492.5
DO45187	32 years, female, NA, stage:1, alive, 1260 days	491.1
DO45153	77 years, female, NA, stage:2, alive, 1380 days	489.1
DO45103	47 years, male, NA, stage:3, alive, 450 days	487.4
DO45117	73 years, female, NA, stage:2, dead, 1110 days	485.2
DO50809	56 years, male, NA, stage:3, dead, 720 days	483.4
DO45131	53 years, male, NA, stage:4, dead, 360 days	482.0
DO23549	74 years, male, NA, stage:3, alive, 990 days	477.9
DO45193	68 years, female, NA, stage:4, dead, 120 days	474.3
DO50855	47 years, male, NA, stage:2, alive, 570 days	470.5
DO23545	67 years, male, NA, stage:2, dead, 570 days	469.0
DO48733	72 years, male, NA, stage:2, alive, 600 days	468.2
DO45243	74 years, female, NA, stage:3, alive, 930 days	459.3
DO45127	73 years, male, NA, stage:3, dead, 420 days	458.8
DO45241	49 years, male, NA, stage:1, alive, 1080 days	455.1
DO45149	70 years, female, NA, stage:2, alive, 1260 days	454.3
DO45211	76 years, male, NA, stage:3, alive, 240 days	452.6
DO48759	73 years, male, NA, stage:3, alive, 720 days	452.4
DO23510	80 years, female, NA, stage:2, alive, 870 days	451.2
DO50818	65 years, male, NA, stage:2, alive, 510 days	449.8
DO50825	70 years, male, NA, stage:2, alive, 390 days	439.7
DO48751	68 years, male, NA, stage:2, dead, 480 days	438.1
DO50817	75 years, male, NA, stage:2, alive, 390 days	437.1
DO45123	78 years, female, NA, stage:2, dead, 570 days	436.3
DO50845	72 years, male, NA, stage:3, alive, 210 days	434.9
DO23552	80 years, female, NA, stage:1, alive, 810 days	434.7
DO23527	72 years, male, NA, stage:1, alive, 1050 days	434.0
DO50776	75 years, male, NA, stage:1, alive, 690 days	429.8
DO45227	57 years, female, NA, stage:2, alive, 1020 days	428.5
DO45165	75 years, male, NA, stage:2, alive, 690 days	425.2
DO45173	63 years, male, NA, stage:3, alive, 1170 days	424.6
DO45189	85 years, female, NA, stage:2, alive, 1200 days	423.7
DO45133	64 years, male, NA, stage:3, dead, 660 days	423.7
DO48679	72 years, male, NA, stage:2, alive, 1200 days	421.7
DO45179	78 years, female, NA, stage:2, alive, 600 days	421.2
DO50802	49 years, male, NA, stage:2, alive, 930 days	416.8
DO48677	58 years, male, NA, stage:3, alive, 1140 days	415.2
DO45183	72 years, female, NA, stage:2, dead, 570 days	411.5
DO50832	73 years, male, NA, stage:3, alive, 90 days	411.3
DO23546	63 years, male, NA, stage:2, alive, 1050 days	411.2
DO50840	49 years, male, NA, stage:2, alive, 330 days	409.8
DO50857	72 years, male, NA, stage:2, alive, 210 days	409.3
DO23534	60 years, male, NA, stage:2, alive, 840 days	408.1
DO45305	66 years, male, NA, stage:4, alive, 300 days	407.4
DO45285	59 years, male, NA, stage:3, alive, 480 days	405.2
DO50785	37 years, male, NA, stage:4, dead, 90 days	400.7
DO45297	61 years, female, NA, stage:4, dead, 1260 days	399.8
DO45231	84 years, male, NA, stage:2, alive, 930 days	398.3
DO45141	73 years, male, NA, stage:2, alive, 1320 days	395.5
DO50822	66 years, male, NA, stage:2, alive, 510 days	392.8
DO45203	71 years, female, NA, stage:2, alive, 1170 days	392.1
DO45137	38 years, male, NA, stage:1, alive, 1320 days	389.3
DO45125	58 years, male, NA, stage:3, alive, 1680 days	385.5
DO23536	56 years, male, NA, stage:2, alive, 930 days	383.2
DO45217	69 years, female, NA, stage:3, dead, 270 days	383.1
DO23530	53 years, male, NA, stage:4, dead, 180 days	382.9
DO48716	71 years, male, NA, stage:2, alive, 720 days	382.8
DO48743	69 years, female, NA, stage:2, alive, 570 days	381.5
DO50859	77 years, male, NA, stage:2, alive, 180 days	378.9
DO45113	58 years, male, NA, stage:3, alive, 1560 days	378.9
DO48682	72 years, female, NA, stage:3, dead, 120 days	378.5
DO45129	61 years, male, NA, stage:3, alive, 1470 days	377.9
DO45221	75 years, female, NA, stage:4, dead, 390 days	376.8
DO45245	75 years, female, NA, stage:2, dead, 240 days	375.7
DO48725	66 years, male, NA, stage:1, alive, 780 days	369.4
DO45289	78 years, female, NA, stage:3, alive, 360 days	367.7
DO50778	60 years, male, NA, stage:4, alive, 630 days	367.0
DO45255	81 years, male, NA, stage:3, alive, 720 days	366.5
DO48712	50 years, male, NA, stage:2, alive, 810 days	366.3
DO45303	62 years, female, NA, stage:3, alive, 990 days	365.5
DO50793	76 years, male, NA, stage:4, alive, 540 days	363.7
DO45105	61 years, male, NA, stage:1, alive, 1680 days	363.7
DO45265	73 years, male, NA, stage:3, alive, 1020 days	362.5
DO45207	68 years, male, NA, stage:1, alive, 1050 days	362.1
DO23512	60 years, male, NA, stage:1, alive, 1260 days	361.1
DO45269	59 years, male, NA, stage:3, alive, 750 days	358.8
DO48681	57 years, male, NA, stage:2, alive, 900 days	357.6
DO48720	62 years, female, NA, stage:2, alive, 570 days	357.5
DO48719	80 years, male, NA, stage:2, alive, 690 days	357.5
DO50808	68 years, male, NA, stage:2, alive, 570 days	356.6
DO23540	73 years, male, NA, stage:1, alive, 750 days	355.7
DO45157	62 years, male, NA, stage:2, alive, 1980 days	352.7
DO45135	77 years, male, NA, stage:1, alive, 1410 days	350.2
DO45239	42 years, male, NA, stage:2, alive, 870 days	348.2
DO50803	62 years, female, NA, stage:1, alive, 540 days	343.6
DO50820	77 years, female, NA, stage:3, alive, 510 days	343.6
DO23535	67 years, male, NA, stage:1, alive, 960 days	342.4
DO50813	56 years, male, NA, stage:2, alive, 420 days	340.3
DO23547	74 years, male, NA, stage:1, alive, 1020 days	337.6
DO50787	63 years, male, NA, stage:3, alive, 480 days	337.1
DO48728	74 years, female, NA, stage:2, alive, 150 days	337.1
DO23511	83 years, female, NA, stage:3, dead, 180 days	335.6
DO23523	52 years, male, NA, stage:3, alive, 1080 days	335.0
DO45096	69 years, male, NA, stage:2, dead, 1290 days	334.1
DO50816	63 years, male, NA, stage:2, alive, 390 days	328.0
DO45143	69 years, male, NA, stage:3, alive, 1290 days	322.3
DO45161	74 years, male, NA, stage:2, dead, 540 days	321.3
DO50804	81 years, male, NA, stage:2, alive, 720 days	318.5
DO50789	73 years, female, NA, stage:2, alive, 570 days	316.3
DO45169	74 years, male, NA, stage:3, alive, 1350 days	316.1
DO50819	72 years, female, NA, stage:2, alive, 510 days	314.4
DO45175	74 years, male, NA, stage:2, alive, 1140 days	312.1
DO45177	81 years, female, NA, stage:3, alive, 1260 days	310.4
DO45107	63 years, female, NA, stage:2, alive, 1710 days	310.0
DO45197	51 years, male, NA, stage:2, alive, 1170 days	309.8
DO50774	68 years, female, NA, stage:2, alive, 720 days	309.8
DO227643	79 years, male, NA, stage:2, alive, 1260 days	308.2
DO45201	49 years, male, NA, stage:1, alive, 900 days	305.8
DO48715	58 years, female, NA, stage:2, dead, 690 days	305.0
DO48693	71 years, male, NA, stage:2, alive, 900 days	298.9
DO45091	56 years, male, NA, stage:2, dead, 1320 days	296.7
DO50807	67 years, male, NA, stage:1, alive, 540 days	283.5
DO45094	76 years, male, NA, stage:3, alive, 1650 days	282.5
DO48757	68 years, female, NA, stage:3, alive, 480 days	280.8
DO48730	73 years, female, NA, stage:2, alive, 630 days	279.3
DO48721	58 years, female, NA, stage:1, alive, 900 days	278.5
DO45247	31 years, female, NA, stage:2, alive, 210 days	269.1
DO23532	71 years, female, NA, stage:1, alive, 960 days	267.5
DO45093	71 years, male, NA, stage:2, dead, 720 days	244.3
DO45109	63 years, male, NA, stage:2, alive, 1590 days	237.9
DO45229	74 years, male, NA, stage:1, alive, 990 days	234.7
DO45223	67 years, male, NA, stage:4, alive, 1020 days	230.7
DO45191	61 years, female, NA, stage:2, alive, 1200 days	220.4
DO48761	55 years, male, NA, stage:2, alive, 870 days	216.4
DO48727	81 years, female, NA, stage:2, dead, 390 days	211.5
DO45215	65 years, male, NA, stage:2, alive, 1170 days	207.8
DO48742	76 years, male, NA, stage:2, alive, 600 days	202.0
DO45181	84 years, female, NA, stage:2, alive, 1200 days	201.7
DO45101	63 years, male, NA, stage:2, alive, 1680 days	198.0
DO45167	67 years, male, NA, stage:2, dead, 1440 days	194.5
DO45233	83 years, male, NA, stage:3, alive, 900 days	193.9
DO23544	67 years, male, NA, stage:2, alive, 960 days	193.2
DO23538	67 years, male, NA, stage:2, alive, 450 days	191.0
DO45111	74 years, male, NA, stage:2, alive, 1590 days	188.1
DO23550	69 years, male, NA, stage:1, alive, 990 days	181.6
DO48760	70 years, female, NA, stage:2, alive, 690 days	180.2
DO45195	62 years, male, NA, stage:1, alive, 390 days	179.8
DO48674	80 years, male, NA, stage:2, alive, 1260 days	164.9
DO23551	73 years, male, NA, stage:3, dead, 150 days	161.2
DO23531	78 years, female, NA, stage:3, alive, 900 days	156.6
DO23517	62 years, male, NA, stage:2, alive, 1200 days	131.7
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
436	Normal	0.6
432	Normal	0.6
723	Tumor	0.5
456	Normal	0.5
824	Normal	0.5
414	Normal	0.5
314	Normal	0.5
698	Normal	0.4
298	Normal	0.4
738	Normal	0.4
818	Normal	0.4
742	Normal	0.4
327	Tumor	0.4
278	Normal	0.4
514	Normal	0.4
666	Normal	0.4
1026	Normal	0.4
714	Normal	0.4
428	Normal	0.3
128	Normal	0.3
148	Normal	0.3
618	Normal	0.3
616	Normal	0.3
416	Normal	0.3
534	Normal	0.3
858	Normal	0.3
424	Normal	0.3
926	Normal	0.3
482	Normal	0.3
756	Normal	0.3
426	Normal	0.3
353	Tumor	0.3
564	Normal	0.3
914	Normal	0.3
777	Tumor	0.3
114	Normal	0.3
132	Normal	0.3
728	Normal	0.3
952	Normal	0.3
912	Normal	0.3
944	Normal	0.3
864	Normal	0.3
422	Normal	0.3
186	Normal	0.3
978	Normal	0.3
513	Tumor	0.3
232	Normal	0.3
196	Normal	0.3
354	Normal	0.3
332	Normal	0.3
188	Normal	0.3
1022	Normal	0.3
111	Normal	0.3
955	Tumor	0.3
964	Normal	0.3
222	Normal	0.3
126	Normal	0.3
218	Normal	0.3
648	Normal	0.3
272	Normal	0.3
258	Normal	0.3
362	Normal	0.3
568	Normal	0.3
262	Normal	0.3
662	Normal	0.3
172	Normal	0.3
574	Normal	0.3
446	Normal	0.3
466	Normal	0.3
286	Normal	0.3
342	Normal	0.3
388	Normal	0.3
356	Normal	0.3
452	Normal	0.3
376	Normal	0.3
615	Tumor	0.3
1046	Normal	0.3
394	Normal	0.3
786	Normal	0.2
434	Normal	0.2
868	Normal	0.2
862	Normal	0.2
866	Normal	0.2
716	Normal	0.2
1042	Normal	0.2
423	Tumor	0.2
162	Normal	0.2
464	Normal	0.2
364	Normal	0.2
966	Normal	0.2
882	Normal	0.2
412	Normal	0.2
546	Normal	0.2
628	Normal	0.2
386	Normal	0.2
228	Normal	0.2
136	Normal	0.2
448	Normal	0.2
642	Normal	0.2
663	Tumor	0.2
1044	Normal	0.2
472	Normal	0.2
1016	Normal	0.2
664	Normal	0.2
468	Normal	0.2
884	Normal	0.2
558	Normal	0.2
328	Normal	0.2
918	Normal	0.2
313	Tumor	0.2
554	Normal	0.2
528	Normal	0.2
462	Normal	0.2
358	Normal	0.2
627	Tumor	0.2
982	Normal	0.2
366	Normal	0.2
312	Normal	0.2
722	Normal	0.2
746	Normal	0.2
214	Normal	0.2
958	Normal	0.2
478	Normal	0.1
956	Normal	0.1
411	Tumor	0.1
938	Normal	0.1
1014	Normal	0.1
635	Tumor	0.1
392	Normal	0.1
526	Normal	0.1
396	Normal	0.1
284	Normal	0.1
744	Normal	0.1
146	Normal	0.1
516	Normal	0.1
976	Normal	0.1
778	Normal	0.1
922	Normal	0.1
852	Normal	0.1
484	Normal	0.1
113	Tumor	0.1
878	Normal	0.1
617	Tumor	0.1
741	Tumor	0.1
572	Normal	0.1
636	Normal	0.1
444	Normal	0.1
138	Normal	0.1
217	Tumor	0.1
724	Normal	0.1
863	Tumor	0.1
147	Tumor	0.1
142	Normal	0.1
124	Normal	0.1
874	Normal	0.1
1032	Normal	0.1
755	Tumor	0.1
867	Tumor	0.1
968	Normal	0.1
344	Normal	0.1
488	Normal	0.1
494	Normal	0.1
573	Tumor	0.1
727	Tumor	0.1
212	Normal	0.1
924	Normal	0.1
224	Normal	0.1
1015	Tumor	0.0
431	Tumor	0.0
352	Normal	0.0
957	Tumor	0.0
223	Tumor	0.0
981	Tumor	0.0
954	Normal	0.0
672	Normal	0.0
696	Normal	0.0
518	Normal	0.0
953	Tumor	0.0
127	Tumor	0.0
816	Normal	0.0
461	Tumor	0.0
384	Normal	0.0
445	Tumor	0.0
1028	Normal	0.0
268	Normal	0.0
686	Normal	0.0
415	Tumor	0.0
745	Tumor	0.0
192	Normal	0.0
515	Tumor	0.0
368	Normal	0.0
474	Normal	0.0
721	Tumor	0.0
277	Tumor	0.0
984	Normal	0.0
1013	Tumor	0.0
538	Normal	0.0
451	Tumor	0.0
925	Tumor	0.0
261	Tumor	0.0
873	Tumor	0.0
311	Tumor	-0.1
524	Normal	-0.1
481	Tumor	-0.1
1045	Tumor	-0.1
195	Tumor	-0.1
1027	Tumor	-0.1
861	Tumor	-0.1
467	Tumor	-0.1
387	Tumor	-0.1
435	Tumor	-0.1
365	Tumor	-0.1
477	Tumor	-0.1
533	Tumor	-0.1
857	Tumor	-0.1
563	Tumor	-0.1
695	Tumor	-0.1
665	Tumor	-0.1
161	Tumor	-0.1
413	Tumor	-0.1
227	Tumor	-0.1
737	Tumor	-0.1
145	Tumor	-0.1
443	Tumor	-0.1
112	Tumor	-0.1
851	Tumor	-0.1
361	Tumor	-0.1
187	Tumor	-0.1
355	Tumor	-0.1
525	Tumor	-0.1
913	Tumor	-0.1
455	Tumor	-0.2
185	Tumor	-0.2
536	Normal	-0.2
141	Tumor	-0.2
661	Tumor	-0.2
433	Tumor	-0.2
1043	Tumor	-0.2
257	Tumor	-0.2
363	Tumor	-0.2
131	Tumor	-0.2
1021	Tumor	-0.2
393	Tumor	-0.2
814	Normal	-0.2
715	Tumor	-0.2
647	Tumor	-0.2
553	Tumor	-0.2
123	Tumor	-0.2
498	Normal	-0.2
213	Tumor	-0.2
191	Tumor	-0.2
865	Tumor	-0.2
911	Tumor	-0.2
977	Tumor	-0.2
785	Tumor	-0.2
427	Tumor	-0.2
492	Normal	-0.2
916	Normal	-0.2
557	Tumor	-0.2
1031	Tumor	-0.2
135	Tumor	-0.2
567	Tumor	-0.2
421	Tumor	-0.2
341	Tumor	-0.2
383	Tumor	-0.2
271	Tumor	-0.2
125	Tumor	-0.3
465	Tumor	-0.3
523	Tumor	-0.3
1025	Tumor	-0.3
137	Tumor	-0.3
537	Tumor	-0.3
823	Tumor	-0.3
571	Tumor	-0.3
915	Tumor	-0.3
267	Tumor	-0.3
221	Tumor	-0.3
385	Tumor	-0.3
951	Tumor	-0.3
917	Tumor	-0.3
923	Tumor	-0.3
351	Tumor	-0.3
357	Tumor	-0.3
447	Tumor	-0.3
713	Tumor	-0.3
493	Tumor	-0.3
425	Tumor	-0.3
487	Tumor	-0.3
527	Tumor	-0.3
391	Tumor	-0.3
517	Tumor	-0.3
963	Tumor	-0.3
375	Tumor	-0.3
641	Tumor	-0.4
171	Tumor	-0.4
813	Tumor	-0.4
471	Tumor	-0.4
483	Tumor	-0.4
671	Tumor	-0.4
211	Tumor	-0.4
395	Tumor	-0.4
881	Tumor	-0.4
883	Tumor	-0.4
817	Tumor	-0.4
943	Tumor	-0.4
967	Tumor	-0.4
975	Tumor	-0.4
815	Tumor	-0.4
343	Tumor	-0.4
535	Tumor	-0.4
685	Tumor	-0.4
697	Tumor	-0.4
463	Tumor	-0.4
1041	Tumor	-0.4
743	Tumor	-0.4
983	Tumor	-0.5
231	Tumor	-0.5
297	Tumor	-0.5
285	Tumor	-0.5
491	Tumor	-0.5
497	Tumor	-0.5
331	Tumor	-0.5
937	Tumor	-0.5
283	Tumor	-0.5
877	Tumor	-0.5
367	Tumor	-0.5
921	Tumor	-0.5
473	Tumor	-0.5
965	Tumor	-0.6
545	Tumor	-0.7
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA006700
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS