HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:69.3 nTPM
HPA Brain:118.3 nTPM
GTEx:69.3 nTPM
FANTOM5:66.7 Scaled Tags Per Million
Pig:105.1 nTPM
Mouse:87.3 nTPM
Allen mouse:10.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006292
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 118.3
Sample id Sample description nTPM
Hippocampus
nTPM: 96.8
2621 Female, age 67, right hemisphere 133.9
2148 Female, age 91, left hemisphere 107.1
2529 Female, age 94, left hemisphere 92.5
1911 Female, age 85, right hemisphere 88.7
1855 Male, age 76, left hemisphere 83.4
1898 Male, age 80, left hemisphere 74.9
Dentate gyrus
nTPM: 95.0
2531 Female, age 67, both hemispheres 161.1
1927 Female, age 91, both hemispheres 99.7
2246 Female, age 85, both hemispheres 89.9
2528 Male, age 74, both hemispheres 79.5
2530 Female, age 94, left hemisphere 73.1
2010 Male, age 76, both hemispheres 66.6
Entorhinal gyrus
nTPM: 102.4
2613 Female, age 94, left hemisphere 166.1
2686 Male, age 75, right hemisphere 110.6
1787 Male, age 76, left hemisphere 97.1
2764 Male, age 80, right hemisphere 92.8
1938 Female, age 85, left hemisphere 92.5
2117 Female, age 91, right hemisphere 55.3
Hippocampus, CA1
nTPM: 100.8
2749 Male, age 80, left hemisphere 129.1
2045 Male, age 76, both hemispheres 111.8
2527 Male, age 74, both hemispheres 110.5
1873 Female, age 85, both hemispheres 79.4
2082 Female, age 91, right hemisphere 73.5
Hippocampus, CA2
nTPM: 77.5
2437 Female, age 94, left hemisphere 91.1
1892 Male, age 76, both hemispheres 84.3
2113 Female, age 91, right hemisphere 81.2
1963 Male, age 80, left hemisphere 73.0
2249 Male, age 74, both hemispheres 68.7
1940 Female, age 85, left hemisphere 67.0
Hippocampus, CA3
nTPM: 118.3
2861 Female, age 67, both hemispheres 180.3
2137 Male, age 80, left hemisphere 153.5
2620 Female, age 94, left hemisphere 151.5
1867 Male, age 76, both hemispheres 81.0
2436 Male, age 74, both hemispheres 79.1
1891 Female, age 85, both hemispheres 64.5
Parahippocampal cortex
nTPM: 100.0
2245 Female, age 91, both hemispheres 158.5
2693 Female, age 94, both hemispheres 119.2
2622 Female, age 67, right hemisphere 115.1
2250 Female, age 67, right hemisphere 108.3
1933 Female, age 85, both hemispheres 95.4
2692 Male, age 74, both hemispheres 95.3
2532 Female, age 72, left hemisphere 80.8
1850 Male, age 80, both hemispheres 77.5
2018 Male, age 76, both hemispheres 75.7
1990 Female, age 91, right hemisphere 74.6
Perirhinal gyrus
nTPM: 107.6
2521 Female, age 94, right hemisphere 155.5
1847 Female, age 91, left hemisphere 122.5
1794 Male, age 80, right hemisphere 88.9
2848 Male, age 76, right hemisphere 87.7
1841 Female, age 85, right hemisphere 83.3
Subiculum
nTPM: 80.2
2619 Male, age 74, both hemispheres 98.5
2438 Female, age 94, left hemisphere 87.5
1901 Male, age 80, both hemispheres 82.9
1977 Female, age 85, both hemispheres 77.0
2729 Female, age 91, right hemisphere 73.0
2042 Male, age 76, both hemispheres 62.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 69.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.3
Samples: 197

Max nTPM: 208.9
Min nTPM: 1.6
Std nTPM: 39.9
Median nTPM: 67.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 208.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 190.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 177.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 168.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 168.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 158.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 156.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 153.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 151.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 150.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 143.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 66.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.7
FF:10153-102I9 76 years, female 69.1
FF:10169-103B7 60 years, female 64.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 105.1
Pig sample Sample description nTPM
Subiculum
nTPM: 105.1
Samples: 4

Max nTPM: 140.7
Min nTPM: 82.7
Sample A Female 140.7
Sample B Female 95.3
Sample C Male 101.8
Sample D Male 82.7
Dorsal hippocampus
nTPM: 90.6
Samples: 4

Max nTPM: 99.9
Min nTPM: 70.9
Sample A Female 99.5
Sample B Female 99.9
Sample C Male 70.9
Sample D Male 92.2
Entorhinal cortex
nTPM: 103.0
Samples: 4

Max nTPM: 123.6
Min nTPM: 84.6
Sample A Female 110.8
Sample B Female 84.6
Sample C Male 123.6
Sample D Male 93.0
Ventral hippocampus
nTPM: 94.4
Samples: 4

Max nTPM: 117.1
Min nTPM: 72.3
Sample A Female 72.3
Sample B Female 73.8
Sample C Male 117.1
Sample D Male 114.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 87.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 85.4
Samples: 4

Max nTPM: 91.9
Min nTPM: 79.1
Sample A Male 91.9
Sample B Male 79.1
Sample C Female 91.0
Sample D Female 79.6
Hippocampal formation
nTPM: 87.3
Samples: 4

Max nTPM: 116.4
Min nTPM: 65.6
Sample A Male 116.4
Sample B Male 89.7
Sample C Female 65.6
Sample D Female 77.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.9
74641324 Antisense, RP_060220_02_F01, Mouse strain C57BL/6J (56 days, male) 11.2
69837860 Antisense, RP_050222_02_D10, Mouse strain C57BL/6J (56 days, male) 10.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org