HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:8.0 nTPM
HPA Brain:17.7 nTPM
GTEx:8.0 nTPM
FANTOM5:23.3 Scaled Tags Per Million
Pig:12.6 nTPM
Mouse:16.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003729
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 17.7
Sample id Sample description nTPM
Hippocampus
nTPM: 17.7
1855 Male, age 76, left hemisphere 20.3
2529 Female, age 94, left hemisphere 20.1
1898 Male, age 80, left hemisphere 17.5
2148 Female, age 91, left hemisphere 16.6
2621 Female, age 67, right hemisphere 16.0
1911 Female, age 85, right hemisphere 15.8
Dentate gyrus
nTPM: 16.6
2010 Male, age 76, both hemispheres 18.9
2528 Male, age 74, both hemispheres 18.3
2530 Female, age 94, left hemisphere 16.9
2246 Female, age 85, both hemispheres 16.4
2531 Female, age 67, both hemispheres 15.3
1927 Female, age 91, both hemispheres 13.5
Entorhinal gyrus
nTPM: 16.3
1787 Male, age 76, left hemisphere 17.1
2686 Male, age 75, right hemisphere 16.9
1938 Female, age 85, left hemisphere 16.8
2117 Female, age 91, right hemisphere 16.6
2764 Male, age 80, right hemisphere 15.8
2613 Female, age 94, left hemisphere 14.4
Hippocampus, CA1
nTPM: 15.6
1873 Female, age 85, both hemispheres 18.5
2527 Male, age 74, both hemispheres 17.8
2082 Female, age 91, right hemisphere 15.9
2749 Male, age 80, left hemisphere 13.9
2045 Male, age 76, both hemispheres 12.1
Hippocampus, CA2
nTPM: 16.1
1963 Male, age 80, left hemisphere 18.5
2437 Female, age 94, left hemisphere 18.0
2249 Male, age 74, both hemispheres 16.6
1940 Female, age 85, left hemisphere 15.8
2113 Female, age 91, right hemisphere 13.8
1892 Male, age 76, both hemispheres 13.6
Hippocampus, CA3
nTPM: 16.4
2436 Male, age 74, both hemispheres 24.0
2137 Male, age 80, left hemisphere 17.4
1891 Female, age 85, both hemispheres 16.1
2620 Female, age 94, left hemisphere 14.4
1867 Male, age 76, both hemispheres 13.4
2861 Female, age 67, both hemispheres 12.8
Parahippocampal cortex
nTPM: 17.4
2532 Female, age 72, left hemisphere 19.0
2692 Male, age 74, both hemispheres 18.8
2622 Female, age 67, right hemisphere 18.0
1850 Male, age 80, both hemispheres 17.5
2693 Female, age 94, both hemispheres 17.4
1990 Female, age 91, right hemisphere 17.3
2250 Female, age 67, right hemisphere 17.0
2245 Female, age 91, both hemispheres 16.4
1933 Female, age 85, both hemispheres 16.3
2018 Male, age 76, both hemispheres 16.3
Perirhinal gyrus
nTPM: 15.0
1847 Female, age 91, left hemisphere 17.1
1841 Female, age 85, right hemisphere 14.8
2521 Female, age 94, right hemisphere 14.8
1794 Male, age 80, right hemisphere 14.1
2848 Male, age 76, right hemisphere 14.1
Subiculum
nTPM: 17.0
1977 Female, age 85, both hemispheres 18.4
2619 Male, age 74, both hemispheres 17.4
2438 Female, age 94, left hemisphere 17.0
2729 Female, age 91, right hemisphere 17.0
1901 Male, age 80, both hemispheres 16.8
2042 Male, age 76, both hemispheres 15.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 8.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.0
Samples: 197

Max nTPM: 14.7
Min nTPM: 4.1
Std nTPM: 1.4
Median nTPM: 7.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 14.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 13.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 12.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 12.1
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 11.6
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 11.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 11.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 10.9
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 10.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 10.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 10.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 23.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.3
FF:10169-103B7 60 years, female 27.0
FF:10153-102I9 76 years, female 19.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 12.6
Pig sample Sample description nTPM
Subiculum
nTPM: 12.7
Samples: 4

Max nTPM: 15.5
Min nTPM: 10.5
Sample A Female 15.5
Sample B Female 12.7
Sample C Male 11.9
Sample D Male 10.5
Dorsal hippocampus
nTPM: 12.0
Samples: 4

Max nTPM: 13.3
Min nTPM: 9.7
Sample A Female 13.0
Sample B Female 13.3
Sample C Male 11.8
Sample D Male 9.7
Entorhinal cortex
nTPM: 11.4
Samples: 4

Max nTPM: 12.5
Min nTPM: 10.7
Sample A Female 11.3
Sample B Female 12.5
Sample C Male 11.2
Sample D Male 10.7
Ventral hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 13.1
Min nTPM: 12.1
Sample A Female 13.1
Sample B Female 12.1
Sample C Male 12.6
Sample D Male 12.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 16.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.1
Samples: 4

Max nTPM: 16.3
Min nTPM: 15.8
Sample A Male 16.3
Sample B Male 16.1
Sample C Female 15.8
Sample D Female 16.3
Hippocampal formation
nTPM: 15.7
Samples: 4

Max nTPM: 17.4
Min nTPM: 14.1
Sample A Male 17.4
Sample B Male 15.9
Sample C Female 15.4
Sample D Female 14.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
70528029 Antisense, RP_050623_01_F09, Mouse strain C57BL/6J (56 days, male) 0.3

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