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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:54.2 nTPM
HPA Brain:63.7 nTPM
GTEx:54.2 nTPM
FANTOM5:284.4 Scaled Tags Per Million
Pig:101.5 nTPM
Mouse:97.2 nTPM
Allen mouse:0.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA017380Antibody HPA058557Antibody CAB047320
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedLow







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 63.4
2481 Female, age 94, left hemisphere 82.0
1857 Female, age 85, left hemisphere 76.0
1854 Male, age 80, left hemisphere 70.3
2290 Female, age 72, unknown 63.7
2846 Female, age 79, unknown 62.1
2288 Male, age 75, left hemisphere 52.8
1781 Male, age 74, unknown 50.8
2289 Male, age 61, right hemisphere 49.4
Globus pallidus, externus
nTPM: 59.5
1996 Male, age 80, right hemisphere 79.1
2772 Female, age 79, unknown 73.3
2395 Male, age 75, both hemispheres 59.1
2646 Male, age 61, right hemisphere 49.0
2567 Female, age 72, unknown 37.1
Globus pallidus, internus
nTPM: 56.3
2037 Male, age 80, right hemisphere 71.7
2483 Female, age 94, right hemisphere 66.7
1818 Male, age 74, unknown 62.8
2778 Female, age 91, both hemispheres 54.2
2287 Male, age 75, right hemisphere 51.8
2566 Female, age 72, unknown 44.8
2111 Female, age 85, right hemisphere 41.9
Nucleus accumbens
nTPM: 63.7
2698 Female, age 72, unknown 76.9
1856 Female, age 91, right hemisphere 68.7
2286 Male, age 75, left hemisphere 66.6
1806 Female, age 85, left hemisphere 64.7
2391 Female, age 94, left hemisphere 64.1
1783 Male, age 74, unknown 57.2
2824 Male, age 61, right hemisphere 56.1
2732 Male, age 80, right hemisphere 55.4
Nucleus basalis of Meynert
nTPM: 58.5
2821 Male, age 75, both hemispheres 64.7
2393 Male, age 80, right hemisphere 61.9
2484 Female, age 94, left hemisphere 55.0
2569 Male, age 61, both hemispheres 52.3
Nucleus of the diagonal band
nTPM: 55.9
1812 Female, age 91, both hemispheres 62.0
2775 Male, age 80, right hemisphere 60.9
2195 Female, age 85, both hemispheres 55.9
1979 Male, age 74, unknown 55.0
2029 Male, age 61, right hemisphere 45.8
Putamen
nTPM: 54.6
2482 Female, age 94, left hemisphere 79.6
1937 Female, age 91, right hemisphere 58.9
2466 Female, age 79, unknown 56.0
1838 Male, age 80, right hemisphere 51.3
2489 Female, age 72, unknown 49.6
1829 Male, age 74, unknown 49.0
2647 Male, age 75, left hemisphere 37.5
Septal nuclei
nTPM: 57.3
2031 Female, age 72, unknown 64.1
1960 Male, age 74, unknown 63.1
2059 Female, age 85, both hemispheres 57.7
2199 Male, age 80, right hemisphere 57.4
2009 Female, age 91, both hemispheres 55.9
2629 Female, age 94, right hemisphere 54.9
2394 Male, age 61, left hemisphere 48.2
Stria terminalis, bed nucleus
nTPM: 47.5
1974 Female, age 91, both hemispheres 56.9
2201 Male, age 74, unknown 43.5
2486 Female, age 94, both hemispheres 42.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 51.5
Samples: 246

Max nTPM: 84.2
Min nTPM: 21.2
Std nTPM: 11.7
Median nTPM: 50.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 84.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 83.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 83.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 81.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 78.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 78.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 77.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 77.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 76.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 75.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 75.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 75.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 73.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 73.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 72.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 71.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 70.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 70.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 69.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 68.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 68.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 67.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 67.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 67.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 67.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 66.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 66.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 65.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 65.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 65.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 65.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 65.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 65.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 64.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 64.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 64.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 64.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 63.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 63.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 63.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 62.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 62.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 62.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 62.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 62.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 62.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 62.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 62.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 61.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 61.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 61.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 60.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 60.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 60.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 59.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 59.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 59.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 59.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 58.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 58.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 58.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 58.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 57.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 57.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 57.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 57.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 57.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 57.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 57.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 57.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 56.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 56.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 56.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 56.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 56.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 56.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 56.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 56.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 55.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 55.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 55.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 55.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 55.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 55.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 54.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 54.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 54.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 54.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 54.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 53.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 53.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 53.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 53.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 53.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 53.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 53.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 53.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 53.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 53.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 53.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 52.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 52.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 52.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 52.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 52.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 52.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 52.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 52.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 52.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 52.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 52.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 51.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 51.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 51.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 51.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 51.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 51.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 51.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 51.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 50.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 50.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 50.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 50.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 50.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 50.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 50.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 49.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 49.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 49.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 49.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 49.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 49.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 49.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 49.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 49.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 49.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 48.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 48.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 48.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 48.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 48.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 48.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 48.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 48.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 48.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 48.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 48.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 48.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 48.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 47.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 47.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 47.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 47.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 47.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 47.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 47.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 46.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 46.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 46.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 46.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 46.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 46.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 46.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 46.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 46.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 45.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 45.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 45.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 45.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 45.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 45.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 44.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 44.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 44.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 44.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 44.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 44.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 44.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 43.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 43.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 43.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 43.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 43.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 43.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 43.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 43.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 43.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 43.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 43.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 43.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 43.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 43.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 42.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 42.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 42.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 42.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 42.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 42.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 42.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 41.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 41.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 41.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 41.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 41.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 41.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 40.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 40.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 40.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 40.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 40.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 40.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 39.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 39.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 39.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 39.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 39.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 39.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 39.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 39.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 38.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 38.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 38.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 37.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 37.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 37.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 36.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 36.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 36.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 36.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 36.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 35.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 34.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 34.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 33.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 33.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 31.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 30.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 30.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 30.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 29.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 29.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 28.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 27.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 27.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 23.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 21.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 54.2
Samples: 246

Max nTPM: 127.6
Min nTPM: 22.5
Std nTPM: 14.3
Median nTPM: 52.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 127.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 104.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 97.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 95.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 93.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 92.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 86.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 84.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 82.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 82.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 82.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 81.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 81.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 81.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 79.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 79.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 78.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 75.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 73.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 73.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 73.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 72.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 71.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 71.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 70.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 70.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 70.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 69.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 69.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 69.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 69.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 68.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 68.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 68.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 68.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 68.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 67.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 67.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 67.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 67.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 67.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 67.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 66.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 66.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 66.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 65.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 65.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 65.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 65.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 64.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 64.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 63.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 62.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 62.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 62.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 62.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 62.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 62.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 62.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 62.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 61.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 61.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 61.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 61.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 60.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 60.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 60.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 60.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 59.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 59.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 59.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 59.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 59.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 59.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 58.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 58.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 58.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 58.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 58.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 58.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 58.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 57.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 57.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 57.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 57.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 57.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 57.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 57.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 57.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 57.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 56.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 56.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 56.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 56.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 56.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 56.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 56.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 55.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 55.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 55.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 55.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 55.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 55.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 55.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 55.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 54.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 54.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 54.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 54.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 54.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 54.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 53.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 53.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 53.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 53.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 53.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 53.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 53.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 53.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 52.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 52.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 52.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 52.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 52.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 52.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 52.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 52.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 52.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 51.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 51.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 51.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 51.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 51.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 51.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 51.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 51.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 50.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 50.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 50.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 50.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 50.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 50.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 50.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 50.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 50.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 49.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 49.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 49.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 49.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 49.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 48.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 48.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 48.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 48.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 48.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 48.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 48.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 48.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 48.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 48.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 48.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 48.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 48.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 47.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 47.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 47.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 47.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 47.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 47.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 47.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 46.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 46.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 46.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 45.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 45.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 45.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 45.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 45.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 45.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 45.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 45.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 44.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 44.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 44.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 44.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 44.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 44.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 43.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 43.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 43.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 43.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 43.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 43.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 43.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 43.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 42.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 42.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 42.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 42.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 42.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 42.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 42.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 41.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 41.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 41.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 41.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 41.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 40.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 40.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 40.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 40.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 40.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 39.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 39.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 39.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 39.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 39.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 38.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 38.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 37.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 37.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 37.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 37.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 36.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 36.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 36.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 36.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 36.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 35.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 35.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 35.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 35.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 35.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 35.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 35.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 34.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 33.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 33.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 33.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 32.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 32.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 31.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 31.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 28.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 23.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 22.5
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Brain - Putamen (basal ganglia)
Average nTPM: 52.7
Samples: 205

Max nTPM: 92.9
Min nTPM: 23.2
Std nTPM: 12.5
Median nTPM: 50.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 92.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 90.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 89.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 88.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 82.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 80.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 80.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 79.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 78.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 78.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 76.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 75.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 75.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 74.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 74.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 73.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 71.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 71.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 71.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 70.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 70.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 70.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 69.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 69.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 68.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 68.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 68.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 68.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 68.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 67.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 66.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 66.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 65.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 65.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 65.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 64.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 63.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 63.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 63.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 63.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 63.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 62.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 62.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 61.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 61.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 60.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 60.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 60.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 60.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 60.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 59.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 59.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 59.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 59.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 59.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 58.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 58.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 58.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 57.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 57.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 57.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 57.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 57.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 57.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 56.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 56.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 56.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 56.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 56.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 56.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 55.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 55.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 55.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 54.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 54.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 54.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 54.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 53.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 53.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 53.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 52.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 52.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 52.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 52.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 52.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 52.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 52.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 52.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 52.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 52.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 51.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 51.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 51.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 51.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 51.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 51.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 51.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 51.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 50.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 50.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 50.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 50.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 50.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 50.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 49.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 49.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 49.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 49.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 49.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 49.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 49.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 49.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 49.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 49.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 48.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 48.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 48.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 48.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 48.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 48.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 48.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 48.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 48.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 47.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 47.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 47.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 47.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 47.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 47.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 47.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 47.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 47.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 47.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 46.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 46.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 46.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 46.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 46.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 45.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 45.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 45.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 45.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 45.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 45.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 45.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 44.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 44.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 44.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 44.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 43.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 43.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 43.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 43.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 43.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 43.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 43.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 43.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 42.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 42.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 42.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 42.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 42.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 42.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 42.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 42.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 42.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 42.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 42.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 41.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 41.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 41.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 41.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 41.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 40.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 40.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 40.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 40.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 40.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 40.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 40.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 40.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 39.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 39.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 39.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 39.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 39.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 38.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 38.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 38.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 37.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 37.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 37.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 37.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 37.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 36.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 36.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 36.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 34.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 34.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 32.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 31.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 31.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 29.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 27.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 23.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

284.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 284.4
FF:10164-103B2 76 years, female 284.4
Nucleus accumbens
Scaled Tags Per Million: 213.3
FF:10037-101F1 23-56 years, mixed 213.3
Putamen
Scaled Tags Per Million: 248.4
FF:10176-103C5 60 years, female 248.4
Globus pallidus
Scaled Tags Per Million: 276.7
FF:10175-103C4 60 years, female 356.2
FF:10161-103A8 76 years, female 197.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

101.5
Pig sample Sample description nTPM
Caudate
nTPM: 97.4
Samples: 4

Max nTPM: 112.8
Min nTPM: 85.9
Sample A Female 91.6
Sample B Female 99.4
Sample C Male 112.8
Sample D Male 85.9
Putamen
nTPM: 91.6
Samples: 4

Max nTPM: 111.6
Min nTPM: 74.4
Sample A Female 90.4
Sample B Female 74.4
Sample C Male 111.6
Sample D Male 89.8
Septum
nTPM: 101.5
Samples: 4

Max nTPM: 119.2
Min nTPM: 88.2
Sample A Female 119.2
Sample B Female 88.2
Sample C Male 109.4
Sample D Male 89.1
Ventral pallidum
nTPM: 91.8
Samples: 4

Max nTPM: 105.0
Min nTPM: 83.0
Sample A Female 105.0
Sample B Female 93.8
Sample C Male 83.0
Sample D Male 85.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 89.6
Samples: 4

Max nTPM: 97.4
Min nTPM: 80.2
Sample A Male 97.4
Sample B Male 92.6
Sample C Female 88.1
Sample D Female 80.2
Septum
nTPM: 97.2
Samples: 4

Max nTPM: 114.9
Min nTPM: 84.1
Sample A Male 84.1
Sample B Male 99.7
Sample C Female 114.9
Sample D Female 90.0
Ventral forebrain
nTPM: 83.5
Samples: 4

Max nTPM: 97.6
Min nTPM: 73.9
Sample A Male 73.9
Sample B Male 81.6
Sample C Female 97.6
Sample D Female 80.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
1343 Antisense, RP_Baylor_102713, Mouse strain C57BL/6J (56 days, male) 0.1
1344 Antisense, RP_Baylor_102713, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.2
1343 Antisense, RP_Baylor_102713, Mouse strain C57BL/6J (56 days, male) 0.2
1344 Antisense, RP_Baylor_102713, Mouse strain C57BL/6J (56 days, male) 0.2

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