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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Cells in glomeruli:
Not detected
Cells in tubules:
Not detected
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
139.1
nTPM
HPA:
139.1
nTPM
GTEx:
57.7
nTPM
FANTOM5:
461.4
Scaled Tags Per Million
KIDNEY - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA017380
Antibody HPA058557
Antibody CAB047320
Cells in glomeruli
Not detected
Low
Not detected
Cells in tubules
Low
Not detected
Not detected
KIDNEY - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
139.1
Female, age 58
Kidney sample 55 nTPM: 154
Cell types%
Cells in tubules:
60
Cells in glomeruli:
20
Fibroblasts:
5
Other cell types:
15
Female, age 67
Kidney sample 56 nTPM: 145.2
Cell types%
Cells in tubules:
70
Cells in glomeruli:
15
Fibroblasts:
10
Other cell types:
5
Female, age 55
Kidney sample 57 nTPM: 124.4
Cell types%
Cells in tubules:
80
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
5
Male, age 46
Kidney sample 58 nTPM: 102.2
Cell types%
Cells in tubules:
60
Cells in glomeruli:
25
Fibroblasts:
5
Other cell types:
10
Female, age 57
Kidney sample 358 nTPM: 129.1
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Male, age 78
Kidney sample 377 nTPM: 164.7
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
20
Male, age 73
Kidney sample 380 nTPM: 191
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Female, age 59
Kidney sample 394 nTPM: 119.4
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
15
Female, age 48
Kidney sample 414 nTPM: 121.6
Cell types%
Cells in tubules:
60
Cells in glomeruli:
5
Fibroblasts:
10
Other cell types:
25
KIDNEY - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
57.7
GTEx sample id
Sample description
nTPM
Kidney - Cortex Average nTPM: 57.7
Samples: 85
Max nTPM: 104.9
Min nTPM: 25.4
Std nTPM: 15.7
Median nTPM: 56.6
GTEX-NPJ8-2226-SM-3TW8D
40-49 years, male
104.9
GTEX-1JMQK-1926-SM-CJI3B
60-69 years, male
100.5
GTEX-QDVN-1626-SM-48TZC
50-59 years, male
97.1
GTEX-1JMPZ-1226-SM-ARU8Y
30-39 years, male
92.5
GTEX-14E6D-2526-SM-5YYA9
50-59 years, male
84.5
GTEX-1PWST-2226-SM-EVR3G
70-79 years, male
82.0
GTEX-1497J-0826-SM-5NQAJ
60-69 years, male
81.9
GTEX-T6MN-1826-SM-EXOHN
50-59 years, male
81.0
GTEX-1CB4J-1926-SM-7MGX8
60-69 years, male
78.1
GTEX-11TTK-1926-SM-5PNW8
60-69 years, female
77.1
GTEX-13RTJ-2226-SM-5S2Q1
60-69 years, male
76.3
GTEX-17F96-1926-SM-7MGWY
70-79 years, male
75.0
GTEX-1GTWX-1826-SM-9QEHG
60-69 years, male
71.9
GTEX-17F97-1926-SM-7IGM4
50-59 years, male
71.8
GTEX-O5YV-1226-SM-EV795
60-69 years, female
71.7
GTEX-13NYB-1726-SM-5N9G2
40-49 years, male
70.8
GTEX-16MT8-1926-SM-7EPGL
60-69 years, female
69.4
GTEX-13O1R-2526-SM-5N9FW
60-69 years, male
69.1
GTEX-15CHQ-2126-SM-6871M
60-69 years, male
69.0
GTEX-XPVG-0526-SM-4B65N
50-59 years, male
67.0
GTEX-1OJC4-2326-SM-DTXA5
50-59 years, female
67.0
GTEX-1J1OQ-1426-SM-AHZ3P
40-49 years, female
66.2
GTEX-REY6-1826-SM-EAZAT
60-69 years, male
65.9
GTEX-11OF3-1326-SM-5N9FJ
60-69 years, male
65.1
GTEX-1HCU7-1826-SM-A9G2A
50-59 years, male
65.1
GTEX-145MN-0326-SM-5QGQI
30-39 years, male
64.9
GTEX-ZC5H-1726-SM-5HL7X
40-49 years, female
64.3
GTEX-1H3VY-1926-SM-9JGHJ
50-59 years, male
64.1
GTEX-QLQW-1626-SM-CMKFE
30-39 years, male
62.9
GTEX-1K9T9-1826-SM-CXZK2
50-59 years, female
61.1
GTEX-1R9PO-1626-SM-E6CPT
60-69 years, female
60.9
GTEX-P4QS-1126-SM-3NMD5
60-69 years, male
60.7
GTEX-1A3MW-2226-SM-73KUX
60-69 years, female
59.9
GTEX-1N2DW-1826-SM-EAZ54
50-59 years, male
59.8
GTEX-1NV8Z-2226-SM-EXOJ2
60-69 years, male
59.8
GTEX-ZDXO-0226-SM-4WKH7
60-69 years, male
59.6
GTEX-ZYT6-2226-SM-5GIC9
30-39 years, male
59.1
GTEX-1F48J-2226-SM-7MXTN
50-59 years, female
58.8
GTEX-1LG7Y-2726-SM-D5OVW
50-59 years, male
58.4
GTEX-QDT8-1726-SM-EYYV6
30-39 years, female
57.2
GTEX-1C6VQ-2326-SM-7IGN1
50-59 years, male
56.9
GTEX-1GN1U-2126-SM-AHZ4J
50-59 years, female
56.8
GTEX-ZVZP-0926-SM-5GIDB
50-59 years, male
56.6
GTEX-1HB9E-1826-SM-D4P33
50-59 years, male
55.7
GTEX-15DYW-2026-SM-6AJBD
60-69 years, female
55.6
GTEX-ZE9C-1426-SM-4WKGM
60-69 years, male
54.6
GTEX-1399S-0526-SM-5IJG8
30-39 years, female
54.0
GTEX-1IKK5-0926-SM-A9G2U
60-69 years, male
53.4
GTEX-1GMR3-2426-SM-7MXV2
40-49 years, male
52.4
GTEX-14C39-2126-SM-664OH
40-49 years, male
52.0
GTEX-14C5O-2026-SM-5YYB1
60-69 years, male
52.0
GTEX-12696-0926-SM-5FQTV
60-69 years, male
51.6
GTEX-Y5V6-2026-SM-5IFHO
60-69 years, male
51.5
GTEX-1E2YA-1626-SM-7MGXS
50-59 years, male
51.2
GTEX-17HHY-2326-SM-7KFSR
50-59 years, male
50.9
GTEX-1GF9V-1926-SM-9JGHE
60-69 years, male
50.6
GTEX-1A8FM-2026-SM-7P8RN
50-59 years, female
49.4
GTEX-S33H-1426-SM-EZ6L7
30-39 years, male
49.1
GTEX-13112-2126-SM-5GCO4
50-59 years, male
48.5
GTEX-1QP6S-1526-SM-EXUSG
40-49 years, male
48.1
GTEX-1EKGG-2226-SM-7IGOA
60-69 years, male
47.9
GTEX-Y5V5-1226-SM-EYYVP
60-69 years, female
47.9
GTEX-13OVL-1826-SM-5KLZR
50-59 years, male
46.5
GTEX-11GS4-2326-SM-5A5KS
60-69 years, male
46.1
GTEX-1AX8Z-2326-SM-731CR
60-69 years, male
45.9
GTEX-ZLFU-0926-SM-5P9F8
40-49 years, male
45.9
GTEX-1IL2V-1826-SM-ARU7R
70-79 years, male
45.8
GTEX-1H3NZ-2126-SM-9WPQ6
60-69 years, male
45.4
GTEX-147F4-2626-SM-5Q5CS
50-59 years, male
44.4
GTEX-1JMQJ-1726-SM-E9U4V
50-59 years, male
43.9
GTEX-ZYFG-1626-SM-5GZYY
60-69 years, female
42.6
GTEX-1N2EF-1426-SM-EXUSH
60-69 years, male
42.3
GTEX-1GF9W-1326-SM-7P8PX
60-69 years, male
41.7
GTEX-1MUQO-2526-SM-E9TJN
60-69 years, male
40.9
GTEX-12WSG-0826-SM-5EQ5A
50-59 years, female
40.5
GTEX-1JMLX-1526-SM-AHZ3N
50-59 years, male
40.2
GTEX-T5JC-1526-SM-4DM68
20-29 years, male
39.7
GTEX-13OW6-1826-SM-5N9F9
50-59 years, male
39.1
GTEX-1I1GP-1926-SM-CNNQU
50-59 years, male
38.9
GTEX-13OVI-1126-SM-5KLZF
60-69 years, female
38.0
GTEX-RN64-1626-SM-48FD7
50-59 years, male
36.7
GTEX-1BAJH-1826-SM-731DA
70-79 years, male
35.0
GTEX-1JJ6O-2526-SM-AHZ3J
60-69 years, male
31.7
GTEX-1KWVE-0826-SM-CXZKO
30-39 years, male
31.3
GTEX-1HBPI-2026-SM-CE6RZ
50-59 years, male
25.4
Show allShow less
Kidney - Medulla Average nTPM: 50.7
Samples: 4
Max nTPM: 59.2
Min nTPM: 39.3
Std nTPM: 8.6
Median nTPM: 52.0
GTEX-T5JC-1626-SM-EZ6KW
20-29 years, male
59.2
GTEX-RU72-1926-SM-EAZ3F
50-59 years, female
58.8
GTEX-R55E-2026-SM-EZ6L1
20-29 years, male
45.2
GTEX-TKQ2-0626-SM-EZ6LB
50-59 years, male
39.3
KIDNEY - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
