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AGPAT3
HPA
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  • AGPAT3
PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

AGPAT3
Synonyms LPAAT-gamma, LPAAT3, LPLAT3
Gene descriptioni

Full gene name according to HGNC.

1-acylglycerol-3-phosphate O-acyltransferase 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 21
Cytoband q22.3
Chromosome location (bp) 43865223 - 43987592
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

11
Ensembl ENSG00000160216 (version 109)
Entrez gene 56894
HGNC HGNC:326
UniProt Q9NRZ7 (UniProt - Evidence at protein level)
neXtProt NX_Q9NRZ7
GeneCards AGPAT3
Antibodypedia AGPAT3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Converts 1-acyl-sn-glycerol-3-phosphate (lysophosphatidic acid or LPA) into 1,2-diacyl-sn-glycerol-3-phosphate (phosphatidic acid or PA) by incorporating an acyl moiety at the sn-2 position of the glycerol backbone 1. Acts on LPA containing saturated or unsaturated fatty acids C16:0-C20:4 at the sn-1 position using C18:1, C20:4 or C18:2-CoA as the acyl donor 2. Also acts on lysophosphatidylcholine, lysophosphatidylinositol and lysophosphatidylserine using C18:1 or C20:4-CoA 3. Has a preference for arachidonoyl-CoA as a donor (By similarity). Has also a modest lysophosphatidylinositol acyltransferase (LPIAT) activity, converts lysophosphatidylinositol (LPI) into phosphatidylinositol (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Acyltransferase, Transferase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Lipid biosynthesis, Lipid metabolism, Phospholipid biosynthesis, Phospholipid metabolism
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is an acyltransferase that converts lysophosphatidic acid into phosphatidic acid, which is the second step in the de novo phospholipid biosynthetic pathway. The encoded protein may be an integral membrane protein. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
AGPAT3-201
ENSP00000291572
ENST00000291572
Q9NRZ7
[Direct mapping] 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0003841 [1-acylglycerol-3-phosphate O-acyltransferase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005635 [nuclear envelope]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006629 [lipid metabolic process]
GO:0006654 [phosphatidic acid biosynthetic process]
GO:0008654 [phospholipid biosynthetic process]
GO:0012505 [endomembrane system]
GO:0016020 [membrane]
GO:0016024 [CDP-diacylglycerol biosynthetic process]
GO:0016740 [transferase activity]
GO:0016746 [acyltransferase activity]
GO:0042171 [lysophosphatidic acid acyltransferase activity]
Show all
376 aa
43.4 kDa
No 4
AGPAT3-202
ENSP00000332989
ENST00000327505
Q9NRZ7
[Direct mapping] 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0003841 [1-acylglycerol-3-phosphate O-acyltransferase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005635 [nuclear envelope]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006629 [lipid metabolic process]
GO:0006654 [phosphatidic acid biosynthetic process]
GO:0008654 [phospholipid biosynthetic process]
GO:0012505 [endomembrane system]
GO:0016020 [membrane]
GO:0016024 [CDP-diacylglycerol biosynthetic process]
GO:0016740 [transferase activity]
GO:0016746 [acyltransferase activity]
Show all
376 aa
43.4 kDa
No 4
AGPAT3-203
ENSP00000381135
ENST00000398058
Q9NRZ7
[Direct mapping] 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0003841 [1-acylglycerol-3-phosphate O-acyltransferase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005635 [nuclear envelope]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006629 [lipid metabolic process]
GO:0006654 [phosphatidic acid biosynthetic process]
GO:0008654 [phospholipid biosynthetic process]
GO:0012505 [endomembrane system]
GO:0016020 [membrane]
GO:0016024 [CDP-diacylglycerol biosynthetic process]
GO:0016740 [transferase activity]
GO:0016746 [acyltransferase activity]
Show all
376 aa
43.4 kDa
No 4
AGPAT3-204
ENSP00000381138
ENST00000398061
Q9NRZ7
[Direct mapping] 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0003841 [1-acylglycerol-3-phosphate O-acyltransferase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005635 [nuclear envelope]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006629 [lipid metabolic process]
GO:0006654 [phosphatidic acid biosynthetic process]
GO:0008654 [phospholipid biosynthetic process]
GO:0012505 [endomembrane system]
GO:0016020 [membrane]
GO:0016024 [CDP-diacylglycerol biosynthetic process]
GO:0016740 [transferase activity]
GO:0016746 [acyltransferase activity]
Show all
376 aa
43.4 kDa
No 4
AGPAT3-205
ENSP00000381140
ENST00000398063
Q9NRZ7
[Direct mapping] 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0003841 [1-acylglycerol-3-phosphate O-acyltransferase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005635 [nuclear envelope]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006629 [lipid metabolic process]
GO:0006654 [phosphatidic acid biosynthetic process]
GO:0008654 [phospholipid biosynthetic process]
GO:0012505 [endomembrane system]
GO:0016020 [membrane]
GO:0016024 [CDP-diacylglycerol biosynthetic process]
GO:0016740 [transferase activity]
GO:0016746 [acyltransferase activity]
Show all
376 aa
43.4 kDa
No 4
AGPAT3-206
ENSP00000414440
ENST00000422850
C9JL26
[Direct mapping] 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
GO:0016746 [acyltransferase activity]
Show all
255 aa
29.6 kDa
No 2
AGPAT3-207
ENSP00000412079
ENST00000445582
C9J184
[Direct mapping] 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
Show all
128 aa
14.8 kDa
No 2
AGPAT3-208
ENSP00000389318
ENST00000448287
C9JQX8
[Direct mapping] 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016020 [membrane]
Show all
79 aa
9.2 kDa
No 2
AGPAT3-209
ENSP00000394102
ENST00000448845
C9JK35
[Direct mapping] 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   DeepTMHMM predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016020 [membrane]
Show all
38 aa
4.2 kDa
No 0
AGPAT3-210
ENSP00000413906
ENST00000457068
C9JL26
[Direct mapping] 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
GO:0016746 [acyltransferase activity]
Show all
255 aa
29.6 kDa
No 2
AGPAT3-218
ENSP00000443510
ENST00000546158
Q9NRZ7
[Direct mapping] 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0003841 [1-acylglycerol-3-phosphate O-acyltransferase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005635 [nuclear envelope]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006629 [lipid metabolic process]
GO:0006654 [phosphatidic acid biosynthetic process]
GO:0008654 [phospholipid biosynthetic process]
GO:0012505 [endomembrane system]
GO:0016020 [membrane]
GO:0016024 [CDP-diacylglycerol biosynthetic process]
GO:0016740 [transferase activity]
GO:0016746 [acyltransferase activity]
Show all
376 aa
43.4 kDa
No 4

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