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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:30.0 nTPM
HPA Brain:96.3 nTPM
GTEx:30.0 nTPM
FANTOM5:3.6 Scaled Tags Per Million
Pig:44.6 nTPM
Mouse:85.5 nTPM
Allen mouse:5.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018517
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 79.0
2481 Female, age 94, left hemisphere 100.4
1854 Male, age 80, left hemisphere 80.8
2290 Female, age 72, unknown 79.3
1857 Female, age 85, left hemisphere 77.1
1781 Male, age 74, unknown 76.8
2846 Female, age 79, unknown 73.5
2288 Male, age 75, left hemisphere 73.3
2289 Male, age 61, right hemisphere 70.7
Globus pallidus, externus
nTPM: 96.3
1996 Male, age 80, right hemisphere 107.1
2772 Female, age 79, unknown 101.6
2646 Male, age 61, right hemisphere 94.5
2395 Male, age 75, both hemispheres 92.3
2567 Female, age 72, unknown 86.1
Globus pallidus, internus
nTPM: 93.3
2483 Female, age 94, right hemisphere 105.6
2778 Female, age 91, both hemispheres 103.7
2287 Male, age 75, right hemisphere 98.0
2037 Male, age 80, right hemisphere 90.4
1818 Male, age 74, unknown 88.4
2111 Female, age 85, right hemisphere 85.3
2566 Female, age 72, unknown 81.5
Nucleus accumbens
nTPM: 77.9
1856 Female, age 91, right hemisphere 84.1
2286 Male, age 75, left hemisphere 82.0
2824 Male, age 61, right hemisphere 80.0
1783 Male, age 74, unknown 79.8
1806 Female, age 85, left hemisphere 77.0
2391 Female, age 94, left hemisphere 75.9
2732 Male, age 80, right hemisphere 75.0
2698 Female, age 72, unknown 69.8
Nucleus basalis of Meynert
nTPM: 77.9
2569 Male, age 61, both hemispheres 94.8
2393 Male, age 80, right hemisphere 75.3
2484 Female, age 94, left hemisphere 73.5
2821 Male, age 75, both hemispheres 68.0
Nucleus of the diagonal band
nTPM: 69.4
2775 Male, age 80, right hemisphere 77.1
1812 Female, age 91, both hemispheres 75.2
1979 Male, age 74, unknown 65.4
2029 Male, age 61, right hemisphere 65.1
2195 Female, age 85, both hemispheres 64.0
Putamen
nTPM: 81.0
2466 Female, age 79, unknown 91.2
2482 Female, age 94, left hemisphere 82.0
2489 Female, age 72, unknown 80.6
1829 Male, age 74, unknown 80.2
2647 Male, age 75, left hemisphere 79.0
1937 Female, age 91, right hemisphere 78.0
1838 Male, age 80, right hemisphere 76.2
Septal nuclei
nTPM: 68.6
1960 Male, age 74, unknown 80.7
2059 Female, age 85, both hemispheres 74.4
2009 Female, age 91, both hemispheres 69.3
2031 Female, age 72, unknown 68.4
2394 Male, age 61, left hemisphere 66.7
2199 Male, age 80, right hemisphere 65.3
2629 Female, age 94, right hemisphere 55.6
Stria terminalis, bed nucleus
nTPM: 65.5
1974 Female, age 91, both hemispheres 71.3
2201 Male, age 74, unknown 63.9
2486 Female, age 94, both hemispheres 61.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 26.8
Samples: 246

Max nTPM: 137.8
Min nTPM: 2.7
Std nTPM: 26.4
Median nTPM: 10.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 137.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 121.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 108.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 102.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 101.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 93.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 87.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 79.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 76.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 76.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 74.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 74.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 73.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 68.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 68.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 68.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 67.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 67.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 67.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 66.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 66.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 65.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 64.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 64.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 63.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 62.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 62.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 61.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 60.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 60.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 59.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 59.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 59.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 59.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 59.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 59.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 58.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 57.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 56.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 56.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 55.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 55.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 55.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 55.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 54.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 53.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 53.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 53.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 53.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 53.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 52.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 52.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 52.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 52.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 52.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 51.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 51.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 51.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 51.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 50.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 49.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 49.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 49.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 48.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 48.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 47.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 47.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 46.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 46.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 46.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 46.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 45.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 45.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 44.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 43.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 42.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 42.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 42.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 42.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 41.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 40.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 40.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 39.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 38.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 37.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 36.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 34.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 31.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 30.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 27.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 25.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 22.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 22.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 21.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 21.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 18.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 16.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 16.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 16.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 16.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 16.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 15.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 13.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 13.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 13.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 12.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 12.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 12.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 11.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 11.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 11.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 11.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 11.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 11.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 11.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 11.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 11.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 11.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 10.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 10.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 10.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 10.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 10.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 10.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 10.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 10.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 10.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 10.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 9.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 9.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 9.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 9.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 9.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 9.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 9.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 9.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 9.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 9.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 9.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 9.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 9.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 9.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 9.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 8.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 8.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 8.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 8.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 8.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 8.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 8.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 8.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 8.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 8.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 8.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 8.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 8.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 8.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 8.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 8.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 8.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 8.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 8.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 8.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 8.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 8.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 8.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 8.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 8.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 8.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 7.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 7.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 7.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 7.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 7.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 7.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 7.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 7.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 7.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 7.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 7.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 7.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 7.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 7.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 7.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 7.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 7.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 7.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 7.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 7.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 7.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 7.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 7.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 7.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 7.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 7.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 7.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 6.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 6.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 6.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 6.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 6.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 6.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 6.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 6.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 6.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 6.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 6.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 6.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 6.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 6.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 6.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 6.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 6.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 6.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 6.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 6.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 6.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 5.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 5.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 5.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 5.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 5.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 5.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 5.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 5.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 5.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 5.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 4.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 4.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 4.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 4.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 4.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 4.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 4.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 4.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 4.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 4.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 4.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 4.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 4.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 4.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 4.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 4.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 3.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 3.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 2.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 26.4
Samples: 246

Max nTPM: 127.1
Min nTPM: 2.2
Std nTPM: 24.7
Median nTPM: 10.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 127.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 106.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 95.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 93.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 87.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 84.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 82.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 81.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 76.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 70.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 70.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 68.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 65.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 64.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 64.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 63.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 62.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 60.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 59.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 59.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 58.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 57.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 57.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 57.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 57.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 57.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 56.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 56.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 56.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 56.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 56.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 56.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 56.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 56.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 55.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 55.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 55.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 54.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 54.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 54.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 54.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 53.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 53.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 53.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 52.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 52.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 52.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 52.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 52.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 52.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 52.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 51.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 51.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 51.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 51.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 51.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 51.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 51.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 50.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 50.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 50.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 50.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 50.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 50.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 49.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 49.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 49.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 49.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 48.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 47.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 47.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 47.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 47.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 47.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 44.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 44.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 43.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 43.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 43.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 43.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 42.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 40.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 40.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 40.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 40.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 38.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 38.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 38.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 37.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 36.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 34.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 31.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 31.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 30.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 28.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 27.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 25.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 23.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 21.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 20.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 17.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 17.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 17.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 15.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 15.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 13.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 13.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 12.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 12.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 12.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 12.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 12.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 11.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 11.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 11.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 11.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 11.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 11.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 11.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 11.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 10.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 10.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 10.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 10.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 10.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 10.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 10.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 10.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 10.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 9.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 9.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 9.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 9.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 9.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 9.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 9.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 9.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 9.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 9.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 9.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 9.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 9.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 8.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 8.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 8.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 8.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 8.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 8.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 8.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 8.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 8.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 8.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 8.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 8.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 8.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 8.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 8.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 8.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 8.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 8.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 8.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 8.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 8.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 8.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 8.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 8.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 8.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 8.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 7.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 7.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 7.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 7.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 7.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 7.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 7.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 7.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 7.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 7.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 7.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 7.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 7.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 7.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 7.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 7.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 7.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 7.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 7.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 7.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 7.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 6.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 6.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 6.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 6.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 6.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 6.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 6.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 6.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 6.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 6.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 6.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 6.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 6.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 6.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 6.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 6.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 6.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 6.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 6.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 6.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 6.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 6.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 6.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 6.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 6.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 5.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 5.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 5.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 5.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 5.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 5.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 5.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 5.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 5.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 5.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 5.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 5.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 5.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 5.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 5.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 4.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 4.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 4.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 4.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 4.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 4.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 4.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 4.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 4.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 4.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 4.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 4.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 4.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 3.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 3.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 3.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 2.2
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Brain - Putamen (basal ganglia)
Average nTPM: 30.0
Samples: 205

Max nTPM: 121.6
Min nTPM: 3.2
Std nTPM: 29.1
Median nTPM: 10.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 121.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 115.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 113.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 105.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 93.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 93.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 93.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 92.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 91.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 85.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 84.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 79.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 78.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 75.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 74.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 73.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 73.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 72.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 72.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 70.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 70.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 70.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 69.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 69.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 68.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 68.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 68.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 67.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 67.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 65.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 64.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 63.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 63.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 63.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 62.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 62.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 61.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 61.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 61.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 60.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 60.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 60.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 60.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 60.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 60.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 59.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 59.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 58.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 57.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 56.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 55.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 54.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 54.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 53.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 53.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 53.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 53.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 53.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 52.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 52.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 51.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 50.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 50.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 49.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 49.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 48.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 48.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 48.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 46.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 45.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 45.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 44.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 40.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 40.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 38.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 38.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 37.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 34.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 25.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 24.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 22.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 17.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 17.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 14.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 14.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 14.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 13.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 13.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 13.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 13.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 12.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 12.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 12.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 11.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 11.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 11.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 11.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 11.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 11.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 11.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 11.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 10.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 10.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 10.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 10.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 10.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 10.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 10.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 10.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 10.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 10.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 9.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 9.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 9.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 9.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 9.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 9.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 9.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 9.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 9.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 9.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 9.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 9.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 9.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 9.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 9.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 9.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 9.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 8.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 8.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 8.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 8.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 8.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 8.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 8.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 8.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 8.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 8.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 8.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 8.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 8.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 8.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 8.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 8.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 8.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 8.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 8.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 7.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 7.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 7.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 7.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 7.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 7.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 7.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 7.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 7.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 7.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 7.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 7.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 7.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 7.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 7.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 7.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 7.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 7.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 7.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 7.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 7.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 7.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 7.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 6.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 6.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 6.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 6.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 6.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 6.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 6.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 6.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 6.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 6.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 6.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 6.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 6.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 6.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 6.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 6.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 6.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 6.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 6.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 6.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 5.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 5.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 5.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 5.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 5.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 5.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 5.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 5.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 5.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 5.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 4.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 4.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 3.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 3.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 3.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 2.0
FF:10164-103B2 76 years, female 2.0
Nucleus accumbens
Scaled Tags Per Million: 3.6
FF:10037-101F1 23-56 years, mixed 3.6
Putamen
Scaled Tags Per Million: 1.8
FF:10176-103C5 60 years, female 1.8
Globus pallidus
Scaled Tags Per Million: 2.8
FF:10175-103C4 60 years, female 4.7
FF:10161-103A8 76 years, female 0.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.6
Pig sample Sample description nTPM
Caudate
nTPM: 41.3
Samples: 4

Max nTPM: 49.2
Min nTPM: 35.0
Sample A Female 35.7
Sample B Female 49.2
Sample C Male 45.1
Sample D Male 35.0
Putamen
nTPM: 44.6
Samples: 4

Max nTPM: 50.7
Min nTPM: 35.7
Sample A Female 44.3
Sample B Female 35.7
Sample C Male 50.7
Sample D Male 47.6
Septum
nTPM: 41.5
Samples: 4

Max nTPM: 48.3
Min nTPM: 38.6
Sample A Female 48.3
Sample B Female 38.6
Sample C Male 40.1
Sample D Male 38.9
Ventral pallidum
nTPM: 41.3
Samples: 4

Max nTPM: 47.2
Min nTPM: 36.4
Sample A Female 36.5
Sample B Female 45.2
Sample C Male 47.2
Sample D Male 36.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 75.1
Samples: 4

Max nTPM: 89.5
Min nTPM: 64.6
Sample A Male 77.3
Sample B Male 89.5
Sample C Female 69.0
Sample D Female 64.6
Septum
nTPM: 82.6
Samples: 4

Max nTPM: 87.9
Min nTPM: 77.4
Sample A Male 85.3
Sample B Male 77.4
Sample C Female 87.9
Sample D Female 79.7
Ventral forebrain
nTPM: 85.5
Samples: 4

Max nTPM: 89.6
Min nTPM: 78.3
Sample A Male 89.6
Sample B Male 78.3
Sample C Female 89.0
Sample D Female 85.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.0
68341412 Antisense, RP_041207_01_E06, Mouse strain C57BL/6J (56 days, male) 5.4
556 Antisense, RP_Baylor_102839, Mouse strain C57BL/6J (56 days, male) 2.5
Pallidum
Expression energy: 5.8
68341412 Antisense, RP_041207_01_E06, Mouse strain C57BL/6J (56 days, male) 7.5
556 Antisense, RP_Baylor_102839, Mouse strain C57BL/6J (56 days, male) 4.0

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