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PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

GATD3
Synonyms C21orf33, D21S2048E, ES1, GATD3A, GT335, HES1, KNP-I, KNP-Ia, KNPH, KNPI
Gene descriptioni

Full gene name according to HGNC.

Glutamine amidotransferase class 1 domain containing 3
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 21
Cytoband q22.3
Chromosome location (bp) 44133610 - 44210114
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000160221 (version 109)
Entrez gene 8209
HGNC HGNC:1273
UniProt P0DPI2 (UniProt - Evidence at protein level)
neXtProt NX_P0DPI2
GeneCards GATD3
Antibodypedia GATD3 antibodies


PROTEIN FUNCTION
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a potential mitochondrial protein that is a member of the DJ-1/PfpI gene family. This protein is overexpressed in fetal Down syndrome brain. Alternate splicing results in multiple transcript variants. [provided by RefSeq, May 2010]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
GATD3-201
ENSP00000291577
ENST00000291577
P0DPI2
[Direct mapping] Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial
Show all
A0A140VKB0
[Target identity:100%; Query identity:100%] Testis secretory sperm-binding protein Li 237E
Show all
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
Show all
268 aa
28.2 kDa
No 0
GATD3-202
ENSP00000344901
ENST00000348499
P0DPI2
[Direct mapping] Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial
Show all
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
Show all
237 aa
24.8 kDa
No 0
GATD3-203
ENSP00000374340
ENST00000389690
A0A096LP12
[Direct mapping] Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial; Putative glutamine amidotransferase-like class 1 domain-containing protein 3B, mitochondrial
Show all
   SignalP predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
224 aa
23.9 kDa
No 0
GATD3-204
ENSP00000405713
ENST00000419699
H7C2G3
[Direct mapping] Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
191 aa
20.2 kDa
No 0
GATD3-205
ENSP00000396655
ENST00000427803
F2Z2Q0
[Direct mapping] Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial
Show all
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
217 aa
22.8 kDa
No 0
GATD3-206
ENSP00000400044
ENST00000449622
H7C1F6
[Direct mapping] Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
184 aa
19.6 kDa
No 0
GATD3-213
ENSP00000495305
ENST00000644251
A0A2R8Y6K9
[Direct mapping] Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial
Show all
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
163 aa
17.1 kDa
No 0
GATD3-215
ENSP00000494853
ENST00000646873
A0A2R8YDR7
[Direct mapping] Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
190 aa
19.7 kDa
No 0

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