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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:60.8 nTPM
HPA Brain:141.5 nTPM
GTEx:60.8 nTPM
FANTOM5:160.1 Scaled Tags Per Million
Pig:35.7 nTPM
Mouse:63.4 nTPM
Allen mouse:8.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA025961Antibody CAB032582
Glial cells MediumMedium
Neuronal cells Not detectedNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

141.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 91.6
1781 Male, age 74, unknown 105.3
2289 Male, age 61, right hemisphere 102.6
1854 Male, age 80, left hemisphere 98.6
2290 Female, age 72, unknown 95.8
2481 Female, age 94, left hemisphere 95.6
2846 Female, age 79, unknown 82.8
1857 Female, age 85, left hemisphere 81.9
2288 Male, age 75, left hemisphere 69.8
Globus pallidus, externus
nTPM: 132.5
2567 Female, age 72, unknown 164.4
1996 Male, age 80, right hemisphere 150.9
2646 Male, age 61, right hemisphere 138.8
2772 Female, age 79, unknown 120.9
2395 Male, age 75, both hemispheres 87.7
Globus pallidus, internus
nTPM: 141.5
2111 Female, age 85, right hemisphere 192.2
2566 Female, age 72, unknown 171.6
2778 Female, age 91, both hemispheres 142.4
2037 Male, age 80, right hemisphere 137.2
1818 Male, age 74, unknown 122.6
2287 Male, age 75, right hemisphere 119.6
2483 Female, age 94, right hemisphere 105.2
Nucleus accumbens
nTPM: 94.7
2732 Male, age 80, right hemisphere 123.9
2391 Female, age 94, left hemisphere 120.0
1806 Female, age 85, left hemisphere 100.8
2698 Female, age 72, unknown 99.1
1783 Male, age 74, unknown 97.9
2824 Male, age 61, right hemisphere 76.2
2286 Male, age 75, left hemisphere 70.1
1856 Female, age 91, right hemisphere 69.7
Nucleus basalis of Meynert
nTPM: 91.3
2569 Male, age 61, both hemispheres 121.3
2484 Female, age 94, left hemisphere 94.1
2393 Male, age 80, right hemisphere 84.2
2821 Male, age 75, both hemispheres 65.7
Nucleus of the diagonal band
nTPM: 67.6
2029 Male, age 61, right hemisphere 78.5
1979 Male, age 74, unknown 71.7
2195 Female, age 85, both hemispheres 68.2
2775 Male, age 80, right hemisphere 60.4
1812 Female, age 91, both hemispheres 59.3
Putamen
nTPM: 92.0
2489 Female, age 72, unknown 115.8
2482 Female, age 94, left hemisphere 107.4
1829 Male, age 74, unknown 95.6
2647 Male, age 75, left hemisphere 89.4
2466 Female, age 79, unknown 82.4
1937 Female, age 91, right hemisphere 81.9
1838 Male, age 80, right hemisphere 71.8
Septal nuclei
nTPM: 81.0
2394 Male, age 61, left hemisphere 114.9
2059 Female, age 85, both hemispheres 94.9
2199 Male, age 80, right hemisphere 93.5
1960 Male, age 74, unknown 67.8
2629 Female, age 94, right hemisphere 67.7
2031 Female, age 72, unknown 66.3
2009 Female, age 91, both hemispheres 61.8
Stria terminalis, bed nucleus
nTPM: 76.3
2201 Male, age 74, unknown 83.9
1974 Female, age 91, both hemispheres 75.1
2486 Female, age 94, both hemispheres 69.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 59.4
Samples: 246

Max nTPM: 163.1
Min nTPM: 21.1
Std nTPM: 22.2
Median nTPM: 53.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 163.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 149.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 148.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 140.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 127.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 125.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 122.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 117.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 114.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 112.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 110.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 110.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 110.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 107.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 106.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 106.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 99.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 99.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 96.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 94.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 93.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 93.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 92.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 90.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 87.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 87.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 86.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 85.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 84.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 83.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 82.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 81.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 80.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 79.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 78.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 78.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 76.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 76.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 75.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 74.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 74.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 74.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 73.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 72.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 72.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 71.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 71.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 71.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 71.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 70.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 70.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 70.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 69.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 68.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 68.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 68.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 68.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 67.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 66.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 66.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 66.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 66.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 65.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 64.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 64.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 64.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 63.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 63.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 63.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 63.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 62.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 62.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 62.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 62.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 62.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 61.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 61.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 61.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 60.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 60.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 60.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 60.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 60.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 59.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 59.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 59.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 59.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 58.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 58.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 58.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 58.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 58.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 58.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 58.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 58.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 58.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 57.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 57.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 57.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 57.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 56.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 56.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 56.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 55.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 55.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 55.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 55.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 55.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 54.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 54.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 54.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 54.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 54.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 54.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 54.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 54.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 54.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 54.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 54.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 53.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 53.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 53.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 53.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 53.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 52.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 52.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 52.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 52.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 52.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 52.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 52.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 52.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 52.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 51.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 51.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 51.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 51.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 50.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 50.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 50.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 50.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 50.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 50.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 50.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 49.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 49.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 49.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 49.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 49.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 49.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 49.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 49.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 49.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 48.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 48.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 48.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 48.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 48.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 48.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 48.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 48.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 48.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 47.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 47.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 47.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 47.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 47.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 46.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 46.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 46.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 46.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 46.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 46.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 46.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 46.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 46.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 46.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 46.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 46.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 46.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 46.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 45.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 45.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 45.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 45.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 45.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 45.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 45.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 45.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 45.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 45.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 44.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 44.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 44.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 44.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 44.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 44.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 44.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 44.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 44.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 44.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 43.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 43.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 43.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 43.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 42.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 42.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 42.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 42.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 42.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 42.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 42.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 42.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 41.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 41.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 41.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 41.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 41.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 41.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 40.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 40.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 40.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 40.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 40.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 40.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 39.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 39.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 39.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 39.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 39.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 38.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 38.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 38.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 38.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 37.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 37.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 36.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 35.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 34.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 34.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 34.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 32.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 30.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 30.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 21.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 21.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 53.7
Samples: 246

Max nTPM: 175.9
Min nTPM: 27.5
Std nTPM: 20.0
Median nTPM: 48.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 175.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 167.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 128.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 120.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 115.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 110.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 110.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 109.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 102.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 96.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 93.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 92.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 92.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 88.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 87.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 86.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 82.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 81.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 81.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 81.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 80.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 79.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 78.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 77.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 77.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 75.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 75.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 75.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 75.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 74.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 72.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 70.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 70.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 69.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 68.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 68.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 68.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 67.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 67.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 67.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 67.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 66.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 66.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 66.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 65.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 64.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 63.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 63.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 62.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 62.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 62.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 62.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 61.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 61.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 61.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 60.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 59.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 59.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 59.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 59.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 59.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 59.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 59.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 58.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 57.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 57.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 57.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 57.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 57.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 56.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 56.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 56.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 56.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 56.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 55.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 55.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 55.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 55.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 55.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 54.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 54.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 54.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 54.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 54.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 54.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 53.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 53.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 52.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 52.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 52.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 52.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 52.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 52.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 52.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 52.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 51.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 51.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 51.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 51.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 51.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 51.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 51.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 50.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 50.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 50.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 50.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 49.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 49.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 49.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 49.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 49.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 49.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 49.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 49.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 48.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 48.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 48.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 48.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 48.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 48.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 48.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 48.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 48.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 48.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 48.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 47.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 47.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 47.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 47.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 47.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 47.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 46.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 46.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 46.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 46.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 46.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 46.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 46.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 46.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 45.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 45.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 45.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 45.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 45.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 45.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 45.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 45.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 45.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 45.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 44.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 44.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 44.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 44.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 44.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 44.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 44.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 44.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 44.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 44.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 44.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 44.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 43.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 43.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 43.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 43.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 43.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 43.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 43.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 43.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 43.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 43.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 43.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 43.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 43.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 42.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 42.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 42.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 42.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 42.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 42.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 42.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 42.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 42.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 42.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 42.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 41.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 41.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 41.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 41.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 41.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 41.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 41.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 41.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 41.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 41.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 40.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 40.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 40.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 40.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 40.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 40.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 40.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 40.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 40.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 40.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 39.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 39.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 39.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 39.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 39.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 39.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 39.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 38.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 38.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 38.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 38.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 38.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 38.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 37.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 37.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 37.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 37.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 37.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 37.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 37.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 37.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 36.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 36.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 36.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 36.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 36.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 36.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 35.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 34.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 34.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 33.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 33.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 33.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 32.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 32.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 31.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 31.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 31.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 30.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 28.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 27.5
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Brain - Putamen (basal ganglia)
Average nTPM: 60.8
Samples: 205

Max nTPM: 157.8
Min nTPM: 30.3
Std nTPM: 20.7
Median nTPM: 55.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 157.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 142.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 129.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 124.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 124.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 120.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 114.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 113.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 111.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 107.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 104.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 103.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 102.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 97.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 94.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 93.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 93.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 93.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 92.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 92.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 88.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 88.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 86.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 84.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 83.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 83.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 80.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 79.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 79.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 78.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 78.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 76.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 76.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 76.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 75.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 74.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 74.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 72.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 72.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 71.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 71.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 71.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 71.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 70.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 69.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 69.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 68.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 68.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 67.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 67.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 66.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 66.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 66.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 65.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 65.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 65.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 65.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 65.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 64.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 64.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 64.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 64.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 63.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 63.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 63.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 63.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 62.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 62.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 62.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 62.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 61.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 61.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 61.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 61.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 61.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 60.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 60.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 60.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 60.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 60.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 60.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 59.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 59.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 59.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 58.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 58.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 58.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 58.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 57.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 57.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 57.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 57.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 57.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 57.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 57.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 56.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 56.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 56.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 56.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 55.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 55.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 55.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 55.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 55.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 55.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 55.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 55.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 54.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 54.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 53.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 53.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 53.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 53.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 52.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 52.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 52.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 52.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 51.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 51.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 51.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 51.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 51.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 51.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 51.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 51.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 51.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 51.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 51.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 50.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 50.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 50.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 50.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 49.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 49.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 49.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 49.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 49.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 49.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 49.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 49.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 49.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 49.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 48.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 48.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 48.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 48.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 48.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 48.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 47.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 47.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 47.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 47.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 47.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 47.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 47.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 46.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 46.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 46.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 46.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 46.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 46.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 46.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 46.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 46.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 46.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 46.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 46.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 45.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 45.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 45.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 45.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 44.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 44.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 44.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 44.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 44.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 44.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 44.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 44.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 43.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 43.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 42.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 42.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 42.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 42.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 42.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 41.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 41.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 41.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 40.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 40.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 40.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 39.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 39.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 39.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 39.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 38.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 36.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 36.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 35.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 35.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 34.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 34.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 34.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 30.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

160.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 91.5
FF:10164-103B2 76 years, female 91.5
Nucleus accumbens
Scaled Tags Per Million: 65.6
FF:10037-101F1 23-56 years, mixed 65.6
Putamen
Scaled Tags Per Million: 65.8
FF:10176-103C5 60 years, female 65.8
Globus pallidus
Scaled Tags Per Million: 160.1
FF:10161-103A8 76 years, female 172.8
FF:10175-103C4 60 years, female 147.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.7
Pig sample Sample description nTPM
Caudate
nTPM: 22.6
Samples: 4

Max nTPM: 25.1
Min nTPM: 20.7
Sample A Female 20.7
Sample B Female 21.4
Sample C Male 25.1
Sample D Male 23.1
Putamen
nTPM: 35.7
Samples: 4

Max nTPM: 48.8
Min nTPM: 21.4
Sample A Female 48.8
Sample B Female 21.4
Sample C Male 30.0
Sample D Male 42.6
Septum
nTPM: 28.5
Samples: 4

Max nTPM: 30.9
Min nTPM: 24.3
Sample A Female 27.9
Sample B Female 24.3
Sample C Male 30.9
Sample D Male 30.8
Ventral pallidum
nTPM: 35.1
Samples: 4

Max nTPM: 49.0
Min nTPM: 20.5
Sample A Female 20.5
Sample B Female 27.0
Sample C Male 49.0
Sample D Male 44.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 63.4
Samples: 4

Max nTPM: 66.2
Min nTPM: 58.6
Sample A Male 66.2
Sample B Male 65.7
Sample C Female 58.6
Sample D Female 63.1
Septum
nTPM: 46.6
Samples: 4

Max nTPM: 54.4
Min nTPM: 39.5
Sample A Male 42.4
Sample B Male 39.5
Sample C Female 50.1
Sample D Female 54.4
Ventral forebrain
nTPM: 45.1
Samples: 4

Max nTPM: 49.0
Min nTPM: 41.4
Sample A Male 45.2
Sample B Male 41.4
Sample C Female 44.8
Sample D Female 49.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.0
75214940 Antisense, RP_060427_01_A06, Mouse strain C57BL/6J (56 days, male) 8.0
Pallidum
Expression energy: 8.0
75214940 Antisense, RP_060427_01_A06, Mouse strain C57BL/6J (56 days, male) 8.0

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