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PIERCE1
HPA
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PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PIERCE1
Synonyms C9orf116, MGC29761, RbEST47
Gene descriptioni

Full gene name according to HGNC.

Piercer of microtubule wall 1
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 9
Cytoband q34.3
Chromosome location (bp) 135495181 - 135501734
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000160345 (version 109)
Entrez gene 138162
HGNC HGNC:28435
UniProt Q5BN46 (UniProt - Evidence at protein level)
neXtProt NX_Q5BN46
GeneCards PIERCE1
Antibodypedia PIERCE1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Microtubule inner protein involved in the attachment of outer dynein arms (ODAs) to dynein-decorated doublet microtubules (DMTs) in cilia axoneme, which is required for motile cilia beating 1. Functions at the initial step of left-right asymmetry specification of the visceral organs.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to act upstream of or within several processes, including cellular response to DNA damage stimulus; cellular response to UV-C; and determination of left/right symmetry. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PIERCE1-202
ENSP00000360854
ENST00000371789
Q5BN46
[Direct mapping] Piercer of microtubule wall 1 protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0003341 [cilium movement]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005879 [axonemal microtubule]
GO:0007368 [determination of left/right symmetry]
GO:0035082 [axoneme assembly]
GO:0042995 [cell projection]
GO:0061966 [establishment of left/right asymmetry]
Show all
92 aa
10.3 kDa
No 0
PIERCE1-203
ENSP00000360856
ENST00000371791
Q5BN46
[Direct mapping] Piercer of microtubule wall 1 protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0003341 [cilium movement]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005879 [axonemal microtubule]
GO:0007368 [determination of left/right symmetry]
GO:0035082 [axoneme assembly]
GO:0042995 [cell projection]
GO:0061966 [establishment of left/right asymmetry]
Show all
92 aa
10.3 kDa
No 0
PIERCE1-204
ENSP00000396392
ENST00000419770
H0Y549
[Direct mapping] Piercer of microtubule wall 1 protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005737 [cytoplasm]
GO:0005879 [axonemal microtubule]
GO:0035082 [axoneme assembly]
Show all
70 aa
7.3 kDa
No 0
PIERCE1-205
ENSP00000395281
ENST00000429260
Q5BN46
[Direct mapping] Piercer of microtubule wall 1 protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0003341 [cilium movement]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005879 [axonemal microtubule]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0007368 [determination of left/right symmetry]
GO:0010468 [regulation of gene expression]
GO:0035082 [axoneme assembly]
GO:0042995 [cell projection]
GO:0061966 [establishment of left/right asymmetry]
GO:0071494 [cellular response to UV-C]
Show all
136 aa
15.3 kDa
No 0

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