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ST6GALNAC6
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  • ST6GALNAC6
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:142.0 nTPM
HPA Brain:113.0 nTPM
GTEx:142.0 nTPM
FANTOM5:145.6 Scaled Tags Per Million
Pig:52.4 nTPM
Mouse:102.7 nTPM
Allen mouse:0.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018890
Glial cells Low
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 111.0
2290 Female, age 72, unknown 139.2
2846 Female, age 79, unknown 138.5
1857 Female, age 85, left hemisphere 125.0
1854 Male, age 80, left hemisphere 109.1
2481 Female, age 94, left hemisphere 101.6
1781 Male, age 74, unknown 99.4
2289 Male, age 61, right hemisphere 98.0
2288 Male, age 75, left hemisphere 77.2
Globus pallidus, externus
nTPM: 61.5
2646 Male, age 61, right hemisphere 96.4
2567 Female, age 72, unknown 57.1
1996 Male, age 80, right hemisphere 54.2
2772 Female, age 79, unknown 51.7
2395 Male, age 75, both hemispheres 47.9
Globus pallidus, internus
nTPM: 53.0
2483 Female, age 94, right hemisphere 110.6
2566 Female, age 72, unknown 48.3
2287 Male, age 75, right hemisphere 46.1
2037 Male, age 80, right hemisphere 46.0
1818 Male, age 74, unknown 45.2
2778 Female, age 91, both hemispheres 40.4
2111 Female, age 85, right hemisphere 33.9
Nucleus accumbens
nTPM: 94.1
1783 Male, age 74, unknown 135.6
1806 Female, age 85, left hemisphere 119.5
1856 Female, age 91, right hemisphere 103.3
2824 Male, age 61, right hemisphere 98.0
2698 Female, age 72, unknown 92.8
2286 Male, age 75, left hemisphere 77.9
2391 Female, age 94, left hemisphere 67.9
2732 Male, age 80, right hemisphere 57.9
Nucleus basalis of Meynert
nTPM: 94.8
2569 Male, age 61, both hemispheres 114.1
2393 Male, age 80, right hemisphere 94.8
2484 Female, age 94, left hemisphere 93.9
2821 Male, age 75, both hemispheres 76.6
Nucleus of the diagonal band
nTPM: 89.7
2775 Male, age 80, right hemisphere 98.6
2195 Female, age 85, both hemispheres 95.0
1812 Female, age 91, both hemispheres 87.8
2029 Male, age 61, right hemisphere 84.0
1979 Male, age 74, unknown 83.3
Putamen
nTPM: 113.0
2489 Female, age 72, unknown 138.0
2466 Female, age 79, unknown 133.7
2647 Male, age 75, left hemisphere 126.2
1829 Male, age 74, unknown 109.8
1838 Male, age 80, right hemisphere 100.9
1937 Female, age 91, right hemisphere 93.4
2482 Female, age 94, left hemisphere 88.9
Septal nuclei
nTPM: 89.2
1960 Male, age 74, unknown 117.6
2059 Female, age 85, both hemispheres 102.4
2031 Female, age 72, unknown 96.1
2199 Male, age 80, right hemisphere 86.2
2629 Female, age 94, right hemisphere 79.1
2009 Female, age 91, both hemispheres 71.8
2394 Male, age 61, left hemisphere 71.5
Stria terminalis, bed nucleus
nTPM: 76.1
1974 Female, age 91, both hemispheres 86.4
2486 Female, age 94, both hemispheres 80.4
2201 Male, age 74, unknown 61.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

142.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 135.6
Samples: 246

Max nTPM: 236.4
Min nTPM: 47.5
Std nTPM: 31.1
Median nTPM: 133.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 236.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 232.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 219.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 216.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 208.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 205.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 204.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 199.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 198.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 192.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 190.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 190.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 189.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 188.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 188.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 187.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 187.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 186.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 186.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 185.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 182.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 181.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 181.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 180.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 176.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 174.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 173.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 173.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 172.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 172.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 172.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 170.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 169.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 169.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 167.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 167.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 166.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 166.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 166.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 165.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 165.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 165.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 165.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 165.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 165.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 164.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 163.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 162.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 162.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 159.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 158.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 158.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 158.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 158.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 158.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 157.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 157.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 156.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 156.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 155.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 155.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 155.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 154.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 154.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 153.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 153.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 152.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 152.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 152.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 151.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 151.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 151.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 150.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 149.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 149.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 149.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 148.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 148.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 147.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 147.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 144.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 144.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 143.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 143.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 142.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 142.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 142.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 142.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 141.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 141.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 141.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 141.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 141.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 140.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 140.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 140.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 140.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 140.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 140.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 140.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 139.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 139.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 138.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 138.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 138.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 138.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 138.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 137.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 137.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 137.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 136.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 136.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 136.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 135.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 134.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 134.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 134.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 134.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 133.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 133.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 133.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 133.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 133.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 133.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 132.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 132.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 132.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 132.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 132.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 132.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 131.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 131.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 131.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 131.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 131.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 131.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 131.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 130.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 130.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 130.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 130.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 129.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 127.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 127.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 127.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 127.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 126.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 126.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 125.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 125.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 124.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 124.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 124.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 124.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 124.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 123.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 123.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 123.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 123.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 123.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 122.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 122.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 122.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 122.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 121.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 121.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 121.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 121.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 120.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 120.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 119.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 119.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 118.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 118.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 117.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 117.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 117.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 116.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 114.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 113.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 113.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 112.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 112.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 112.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 111.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 111.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 111.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 110.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 110.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 110.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 110.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 110.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 110.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 109.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 109.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 109.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 108.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 108.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 108.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 107.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 107.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 107.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 107.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 107.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 107.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 107.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 106.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 106.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 106.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 105.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 104.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 103.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 103.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 103.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 101.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 101.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 101.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 101.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 101.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 100.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 100.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 98.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 97.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 97.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 96.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 95.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 95.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 94.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 94.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 93.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 93.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 92.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 91.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 90.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 90.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 86.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 86.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 86.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 85.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 84.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 83.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 80.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 79.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 64.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 62.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 47.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 142.0
Samples: 246

Max nTPM: 309.1
Min nTPM: 23.1
Std nTPM: 41.0
Median nTPM: 140.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 309.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 286.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 243.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 236.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 235.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 227.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 226.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 224.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 216.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 212.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 210.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 209.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 205.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 204.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 203.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 202.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 202.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 202.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 200.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 200.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 199.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 199.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 198.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 195.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 194.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 194.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 192.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 192.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 189.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 188.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 188.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 187.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 187.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 187.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 185.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 184.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 182.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 180.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 179.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 179.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 177.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 177.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 176.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 175.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 175.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 174.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 174.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 174.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 174.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 172.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 172.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 171.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 169.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 169.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 168.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 168.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 166.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 166.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 166.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 166.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 166.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 166.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 165.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 165.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 164.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 164.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 163.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 163.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 163.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 163.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 163.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 162.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 162.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 160.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 160.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 159.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 159.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 159.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 159.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 159.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 157.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 156.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 155.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 155.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 155.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 154.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 153.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 153.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 153.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 153.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 153.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 152.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 151.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 150.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 150.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 149.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 149.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 149.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 148.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 147.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 147.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 147.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 146.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 146.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 145.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 145.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 145.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 145.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 144.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 144.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 144.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 143.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 143.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 143.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 143.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 142.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 142.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 142.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 142.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 142.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 141.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 141.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 140.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 139.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 139.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 139.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 139.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 139.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 138.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 138.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 138.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 137.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 137.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 136.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 136.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 136.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 135.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 135.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 134.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 134.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 133.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 133.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 133.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 132.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 132.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 131.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 131.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 131.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 130.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 130.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 130.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 129.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 129.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 127.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 127.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 126.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 126.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 126.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 126.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 126.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 125.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 125.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 125.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 125.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 125.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 124.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 124.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 124.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 124.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 123.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 123.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 122.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 121.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 121.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 121.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 120.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 119.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 119.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 119.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 118.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 117.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 116.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 116.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 116.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 116.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 116.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 115.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 114.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 113.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 113.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 113.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 112.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 112.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 112.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 111.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 110.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 110.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 109.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 109.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 109.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 109.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 109.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 109.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 108.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 108.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 107.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 107.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 107.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 107.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 106.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 105.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 104.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 104.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 102.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 102.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 102.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 101.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 100.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 98.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 97.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 97.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 96.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 95.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 94.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 93.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 91.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 88.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 87.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 86.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 85.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 85.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 81.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 80.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 72.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 72.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 70.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 65.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 64.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 62.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 61.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 50.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 49.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 48.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 47.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 29.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 23.1
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Brain - Putamen (basal ganglia)
Average nTPM: 139.4
Samples: 205

Max nTPM: 255.2
Min nTPM: 46.4
Std nTPM: 34.4
Median nTPM: 138.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 255.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 252.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 234.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 227.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 227.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 224.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 218.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 211.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 207.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 205.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 195.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 194.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 193.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 193.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 192.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 188.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 186.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 183.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 183.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 181.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 181.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 181.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 179.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 179.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 178.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 176.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 175.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 175.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 174.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 174.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 173.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 173.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 172.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 172.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 172.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 169.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 168.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 167.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 167.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 166.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 165.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 165.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 165.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 165.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 162.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 161.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 161.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 160.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 159.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 159.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 159.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 159.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 158.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 157.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 157.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 156.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 155.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 154.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 154.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 154.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 153.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 153.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 153.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 153.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 152.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 150.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 150.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 150.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 149.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 149.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 148.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 147.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 147.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 147.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 146.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 146.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 146.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 146.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 145.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 145.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 145.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 144.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 144.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 143.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 142.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 142.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 141.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 141.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 141.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 141.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 141.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 140.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 140.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 140.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 139.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 139.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 139.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 139.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 139.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 138.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 138.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 138.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 138.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 137.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 137.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 137.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 137.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 136.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 135.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 135.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 134.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 133.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 133.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 133.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 132.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 131.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 131.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 131.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 130.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 130.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 130.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 130.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 129.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 128.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 128.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 128.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 128.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 127.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 127.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 126.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 126.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 126.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 125.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 125.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 124.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 124.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 123.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 123.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 123.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 121.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 121.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 121.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 121.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 120.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 119.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 119.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 119.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 118.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 118.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 118.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 117.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 115.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 115.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 115.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 115.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 114.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 114.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 114.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 114.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 113.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 113.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 113.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 113.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 112.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 112.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 111.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 111.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 110.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 109.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 109.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 109.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 109.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 109.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 108.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 107.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 106.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 105.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 103.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 102.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 102.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 100.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 99.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 99.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 99.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 99.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 98.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 97.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 97.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 96.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 95.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 95.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 93.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 92.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 91.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 90.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 88.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 88.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 86.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 81.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 80.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 75.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 70.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 63.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 63.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 46.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

145.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 145.6
FF:10164-103B2 76 years, female 145.6
Nucleus accumbens
Scaled Tags Per Million: 106.6
FF:10037-101F1 23-56 years, mixed 106.6
Putamen
Scaled Tags Per Million: 129.3
FF:10176-103C5 60 years, female 129.3
Globus pallidus
Scaled Tags Per Million: 75.3
FF:10175-103C4 60 years, female 85.5
FF:10161-103A8 76 years, female 65.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.4
Pig sample Sample description nTPM
Caudate
nTPM: 52.4
Samples: 4

Max nTPM: 64.0
Min nTPM: 37.5
Sample A Female 37.5
Sample B Female 56.3
Sample C Male 64.0
Sample D Male 51.6
Putamen
nTPM: 52.0
Samples: 4

Max nTPM: 71.7
Min nTPM: 24.3
Sample A Female 24.3
Sample B Female 54.7
Sample C Male 71.7
Sample D Male 57.2
Septum
nTPM: 36.9
Samples: 4

Max nTPM: 41.5
Min nTPM: 24.8
Sample A Female 40.5
Sample B Female 40.7
Sample C Male 24.8
Sample D Male 41.5
Ventral pallidum
nTPM: 40.1
Samples: 4

Max nTPM: 52.5
Min nTPM: 35.4
Sample A Female 36.5
Sample B Female 52.5
Sample C Male 35.4
Sample D Male 36.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 102.6
Samples: 4

Max nTPM: 108.3
Min nTPM: 96.3
Sample A Male 96.3
Sample B Male 104.6
Sample C Female 101.2
Sample D Female 108.3
Septum
nTPM: 80.2
Samples: 4

Max nTPM: 90.7
Min nTPM: 67.3
Sample A Male 87.8
Sample B Male 90.7
Sample C Female 74.9
Sample D Female 67.3
Ventral forebrain
nTPM: 102.7
Samples: 4

Max nTPM: 113.8
Min nTPM: 94.0
Sample A Male 98.9
Sample B Male 94.0
Sample C Female 113.8
Sample D Female 104.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.5
385995 Antisense, RP_040625_01_G03, Mouse strain C57BL/6J (56 days, male) 0.8
74047902 Antisense, RP_051214_02_B12, Mouse strain C57BL/6J (56 days, male) 0.4
74822602 Antisense, RP_060321_02_H01, Mouse strain C57BL/6J (56 days, male) 0.4
Pallidum
Expression energy: 0.3
385995 Antisense, RP_040625_01_G03, Mouse strain C57BL/6J (56 days, male) 0.4
74047902 Antisense, RP_051214_02_B12, Mouse strain C57BL/6J (56 days, male) 0.3
74822602 Antisense, RP_060321_02_H01, Mouse strain C57BL/6J (56 days, male) 0.3

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