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ST6GALNAC6
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  • ST6GALNAC6
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:135.6 nTPM
FANTOM5:145.6 Scaled Tags Per Million
Pig:52.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018890
Glial cells Low
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 135.6
Samples: 246

Max nTPM: 236.4
Min nTPM: 47.5
Std nTPM: 31.1
Median nTPM: 133.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 236.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 232.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 219.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 216.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 208.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 205.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 204.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 199.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 198.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 192.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 190.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 190.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 189.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 188.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 188.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 187.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 187.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 186.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 186.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 185.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 182.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 181.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 181.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 180.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 176.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 174.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 173.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 173.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 172.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 172.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 172.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 170.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 169.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 169.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 167.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 167.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 166.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 166.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 166.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 165.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 165.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 165.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 165.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 165.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 165.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 164.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 163.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 162.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 162.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 159.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 158.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 158.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 158.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 158.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 158.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 157.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 157.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 156.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 156.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 155.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 155.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 155.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 154.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 154.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 153.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 153.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 152.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 152.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 152.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 151.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 151.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 151.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 150.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 149.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 149.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 149.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 148.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 148.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 147.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 147.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 144.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 144.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 143.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 143.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 142.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 142.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 142.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 142.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 141.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 141.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 141.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 141.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 141.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 140.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 140.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 140.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 140.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 140.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 140.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 140.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 139.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 139.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 138.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 138.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 138.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 138.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 138.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 137.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 137.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 137.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 136.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 136.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 136.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 135.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 134.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 134.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 134.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 134.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 133.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 133.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 133.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 133.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 133.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 133.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 132.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 132.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 132.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 132.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 132.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 132.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 131.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 131.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 131.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 131.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 131.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 131.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 131.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 130.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 130.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 130.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 130.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 129.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 127.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 127.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 127.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 127.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 126.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 126.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 125.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 125.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 124.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 124.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 124.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 124.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 124.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 123.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 123.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 123.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 123.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 123.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 122.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 122.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 122.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 122.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 121.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 121.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 121.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 121.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 120.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 120.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 119.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 119.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 118.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 118.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 117.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 117.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 117.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 116.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 114.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 113.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 113.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 112.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 112.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 112.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 111.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 111.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 111.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 110.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 110.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 110.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 110.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 110.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 110.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 109.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 109.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 109.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 108.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 108.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 108.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 107.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 107.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 107.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 107.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 107.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 107.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 107.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 106.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 106.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 106.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 105.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 104.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 103.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 103.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 103.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 101.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 101.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 101.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 101.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 101.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 100.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 100.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 98.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 97.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 97.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 96.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 95.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 95.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 94.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 94.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 93.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 93.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 92.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 91.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 90.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 90.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 86.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 86.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 86.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 85.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 84.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 83.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 80.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 79.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 64.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 62.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 47.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

145.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 145.6
FF:10164-103B2 76 years, female 145.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.4
Pig sample Sample description nTPM
Caudate
nTPM: 52.4
Samples: 4

Max nTPM: 64.0
Min nTPM: 37.5
Sample A Female 37.5
Sample B Female 56.3
Sample C Male 64.0
Sample D Male 51.6

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