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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Not detected
Cells in molecular layer: Not detected
Purkinje cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:6.4 nTPM
HPA Brain:3.6 nTPM
GTEx:6.4 nTPM
FANTOM5:2.0 Scaled Tags Per Million
Pig:63.6 nTPM

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047919
Purkinje cells Not detected
Cells in granular layer Not detected
Cells in molecular layer Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3.6
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 3.6
1788 Male, age 55, unknown 6.4
1774 Male, age 80, left hemisphere 5.8
1769 Male, age 76, right hemisphere 3.4
1768 Female, age 72, unknown 3.3
2055 Female, age 91, right hemisphere 3.0
2003 Female, age 85, right hemisphere 2.7
2101 Male, age 74, right hemisphere 2.2
2006 Male, age 61, right hemisphere 2.0
Cerebellar nuclei
nTPM: 0.7
2177 Female, age 85, both hemispheres 1.6
2318 Male, age 74, left hemisphere 0.8
2783 Female, age 72, unknown 0.8
2175 Male, age 61, right hemisphere 0.7
2882 Male, age 76, left hemisphere 0.7
1879 Male, age 55, unknown 0.5
1966 Female, age 91, left hemisphere 0.5
2005 Male, age 80, left hemisphere 0.5
1871 Male, age 74, unknown 0.4
Flocculonodular lobe
nTPM: 3.4
1835 Female, age 85, right hemisphere 5.4
1771 Male, age 80, left hemisphere 4.7
2176 Female, age 91, right hemisphere 4.5
1765 Male, age 55, unknown 3.0
1792 Male, age 74, unknown 2.8
1767 Male, age 76, left hemisphere 2.2
2004 Male, age 61, right hemisphere 1.4
Vermis
nTPM: 3.4
2834 Male, age 80, left hemisphere 6.3
1988 Female, age 85, left hemisphere 5.7
1770 Male, age 76, left hemisphere 4.0
1928 Female, age 72, unknown 3.9
1825 Male, age 74, unknown 3.8
1766 Male, age 55, unknown 2.4
1778 Female, age 91, left hemisphere 2.3
1751 Male, age 74, right hemisphere 1.5
2460 Male, age 61, both hemispheres 0.3

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6.4
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 6.4
Samples: 215

Max nTPM: 38.4
Min nTPM: 0.3
Std nTPM: 4.7
Median nTPM: 5.4
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 38.4
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 23.6
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 23.0
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 22.5
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 22.3
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 21.2
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 19.4
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 18.9
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 18.4
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 17.7
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 16.7
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 14.1
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 14.0
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 13.9
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 13.4
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 13.2
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 12.9
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 12.6
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 12.1
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 11.6
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 11.5
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 11.3
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 11.2
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 10.9
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 10.9
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 10.0
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 10.0
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 10.0
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 9.9
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 9.9
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 9.8
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 9.7
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 9.5
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 9.5
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 9.4
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 9.4
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 9.4
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 9.2
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 9.1
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 9.0
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 8.9
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 8.9
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 8.8
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 8.6
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 8.5
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 8.4
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 8.2
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 8.1
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 7.9
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 7.8
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 7.8
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 7.6
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 7.6
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 7.6
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 7.5
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 7.5
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 7.4
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 7.3
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 7.3
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 7.2
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 7.1
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 7.1
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 7.1
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 7.1
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 7.0
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 7.0
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 7.0
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 6.9
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 6.9
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 6.8
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 6.8
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 6.8
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 6.7
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 6.7
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 6.7
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 6.7
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 6.6
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 6.6
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 6.6
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 6.6
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 6.6
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 6.5
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 6.4
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 6.4
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 6.4
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 6.4
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 6.2
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 6.1
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 6.1
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 6.0
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 6.0
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 6.0
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 5.9
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 5.9
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 5.9
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 5.8
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 5.7
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 5.6
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 5.6
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 5.6
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 5.5
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 5.5
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 5.5
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 5.5
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 5.5
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 5.5
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 5.4
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 5.4
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 5.4
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 5.3
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 5.3
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 5.3
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 5.2
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 5.2
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 5.1
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 5.0
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 5.0
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 5.0
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 5.0
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 4.9
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 4.9
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 4.9
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 4.9
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 4.9
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 4.8
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 4.8
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 4.8
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 4.8
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 4.8
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 4.8
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 4.7
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 4.6
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 4.6
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 4.5
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 4.4
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 4.4
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 4.4
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 4.4
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 4.3
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 4.3
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 4.3
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 4.3
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 4.2
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 4.2
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 4.2
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 4.1
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 4.0
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 4.0
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 4.0
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 3.9
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 3.9
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 3.9
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 3.9
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 3.8
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 3.8
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 3.8
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 3.8
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 3.8
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 3.6
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 3.6
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 3.6
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 3.5
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 3.5
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 3.5
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 3.4
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 3.4
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 3.4
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 3.3
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 3.3
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 3.2
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 3.2
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 3.2
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 3.1
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 3.1
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 3.1
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 3.1
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 3.0
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 3.0
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 3.0
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 2.8
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 2.8
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 2.8
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 2.7
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 2.7
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 2.6
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 2.5
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 2.5
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 2.4
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 2.4
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 2.4
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 2.3
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 2.3
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 2.3
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 2.3
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 2.2
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 2.1
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 2.1
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 2.0
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 2.0
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 1.9
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 1.8
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 1.8
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 1.6
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 1.6
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 1.5
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 1.5
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 1.4
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 1.4
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 1.4
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 1.2
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 1.2
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 1.1
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 1.1
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 1.0
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 0.3
Show allShow less
Brain - Cerebellum
Average nTPM: 5.4
Samples: 241

Max nTPM: 17.6
Min nTPM: 0.7
Std nTPM: 3.1
Median nTPM: 4.6
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 17.6
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 16.9
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 16.2
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 14.5
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 14.2
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 13.3
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 13.3
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 13.3
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 12.7
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 12.7
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 12.3
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 12.1
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 12.1
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 11.9
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 11.8
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 11.7
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 11.7
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 11.5
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 11.3
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 11.0
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 10.7
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 10.5
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 10.1
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 9.6
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 9.5
GTEX-WL46-2826-SM-3LK81 50-59 years, male 9.2
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 9.0
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 8.9
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 8.9
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 8.9
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 8.8
GTEX-15G19-2826-SM-6M48K 60-69 years, male 8.7
GTEX-11EI6-2926-SM-5985U 60-69 years, male 8.6
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 8.6
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 8.5
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 8.4
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 8.4
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 8.1
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 8.0
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 8.0
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 8.0
GTEX-145LS-3026-SM-5O99S 60-69 years, female 7.8
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 7.7
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 7.6
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 7.6
GTEX-14E6D-2926-SM-664OP 50-59 years, male 7.5
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 7.5
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 7.4
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 7.4
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 7.3
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 7.2
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 7.1
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 7.1
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 6.8
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 6.8
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 6.8
GTEX-11ONC-3026-SM-5985W 60-69 years, male 6.7
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 6.7
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 6.7
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 6.7
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 6.6
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 6.6
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 6.6
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 6.6
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 6.6
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 6.5
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 6.4
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 6.4
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 6.3
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 6.3
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 6.2
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 6.2
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 6.1
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 6.1
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 6.1
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 6.0
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 5.9
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 5.8
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 5.8
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 5.7
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 5.7
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 5.7
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 5.6
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 5.6
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 5.6
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 5.5
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 5.5
GTEX-X261-3126-SM-4PQZC 50-59 years, male 5.5
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 5.5
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 5.4
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 5.4
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 5.4
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 5.4
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 5.3
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 5.2
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 5.2
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 5.2
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 5.2
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 5.1
GTEX-1192X-3226-SM-5987D 50-59 years, male 5.1
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 5.1
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 5.0
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 5.0
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 5.0
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 5.0
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 4.8
GTEX-144GL-2926-SM-5O99F 50-59 years, male 4.8
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 4.8
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 4.8
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 4.8
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 4.8
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 4.8
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 4.7
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 4.7
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 4.7
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 4.7
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 4.7
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 4.6
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 4.6
GTEX-1B933-3026-SM-731DB 50-59 years, female 4.6
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 4.6
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 4.6
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 4.5
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 4.5
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 4.5
GTEX-RU72-2926-SM-2TF66 50-59 years, female 4.5
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 4.5
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 4.5
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 4.4
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 4.4
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 4.4
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 4.3
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 4.3
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 4.3
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 4.3
GTEX-17EVP-2926-SM-793BU 40-49 years, male 4.3
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 4.3
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 4.3
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 4.3
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 4.2
GTEX-13112-2926-SM-5DUWT 50-59 years, male 4.2
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 4.2
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 4.1
GTEX-11DYG-2926-SM-5H132 60-69 years, male 4.0
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 4.0
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 4.0
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 4.0
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 4.0
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 4.0
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 4.0
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 3.9
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 3.9
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 3.9
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 3.8
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 3.8
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 3.8
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 3.8
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 3.8
GTEX-11NUK-3026-SM-5986K 50-59 years, male 3.7
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 3.7
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 3.7
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 3.7
GTEX-18465-2926-SM-7KFSE 50-59 years, male 3.7
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 3.7
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 3.7
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 3.7
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 3.6
GTEX-14ABY-3026-SM-664NE 50-59 years, male 3.6
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 3.6
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 3.5
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 3.5
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 3.5
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 3.4
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 3.4
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 3.4
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 3.3
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 3.3
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 3.3
GTEX-14PN4-3026-SM-664O4 50-59 years, male 3.2
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 3.2
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 3.2
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 3.2
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 3.1
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 3.1
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 3.1
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 3.0
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 3.0
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 3.0
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 2.9
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 2.9
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 2.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 2.9
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 2.9
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 2.8
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 2.8
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 2.8
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 2.8
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 2.8
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 2.7
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 2.7
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 2.7
GTEX-17HII-2926-SM-79OMK 50-59 years, male 2.7
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 2.7
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 2.6
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 2.6
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 2.6
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 2.6
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 2.5
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 2.5
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 2.5
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 2.4
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 2.4
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 2.4
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 2.4
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 2.4
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 2.4
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 2.4
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 2.2
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 2.2
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 2.2
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 2.2
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 2.2
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 2.1
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 2.1
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 2.1
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 2.0
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 2.0
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 2.0
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 1.9
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 1.9
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 1.8
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 1.7
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 1.7
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 1.6
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 1.4
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 1.4
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 1.3
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 1.1
GTEX-12126-0926-SM-5FQTW 20-29 years, male 0.9
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 0.8
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 0.7
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 2.0
FF:10166-103B4 76 years, female 3.2
FF:10083-102B2 22-68 years, mixed 0.8

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.6
Pig sample Sample description nTPM
Cerebellum
nTPM: 63.6
Samples: 4

Max nTPM: 76.3
Min nTPM: 49.5
Sample A Female 76.3
Sample B Female 71.4
Sample C Male 57.3
Sample D Male 49.5

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