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PCSK7
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

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  • BLOOD

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  • PCSK7
PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PCSK7
Synonyms LPC, PC7, PC8, SPC7
Gene descriptioni

Full gene name according to HGNC.

Proprotein convertase subtilisin/kexin type 7
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 11
Cytoband q23.3
Chromosome location (bp) 117204337 - 117232525
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000160613 (version 109)
Entrez gene 9159
HGNC HGNC:8748
UniProt Q16549 (UniProt - Evidence at protein level)
neXtProt NX_Q16549
GeneCards PCSK7
Antibodypedia PCSK7 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Serine endoprotease that processes various proproteins by cleavage at paired basic amino acids, recognizing the RXXX[KR]R consensus motif. Likely functions in the constitutive secretory pathway.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Hydrolase, Protease, Serine protease
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the subtilisin-like proprotein convertase family, which includes proteases that process protein and peptide precursors trafficking through regulated or constitutive branches of the secretory pathway. It encodes a type 1 membrane bound protease that is expressed in many tissues, including neuroendocrine, liver, gut, and brain. The encoded protein undergoes an initial autocatalytic processing event in the ER and then sorts to the trans-Golgi network through endosomes where a second autocatalytic event takes place and the catalytic activity is acquired. This gene encodes one of the seven basic amino acid-specific members which cleave their substrates at single or paired basic residues. It can process proalbumin and is thought to be responsible for the activation of HIV envelope glycoproteins gp160 and gp140. This gene has been implicated in the transcriptional regulation of housekeeping genes and plays a role in the regulation of iron metabolism. A t(11;14)(q23;q32) chromosome translocation associated with B-cell lymphoma occurs between this gene and its inverted counterpart. [provided by RefSeq, Feb 2014]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PCSK7-201
ENSP00000325917
ENST00000320934
Q16549
[Direct mapping] Proprotein convertase subtilisin/kexin type 7
Show all
Enzymes
   Peptidases
   Serine-type peptidases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0004252 [serine-type endopeptidase activity]
GO:0005515 [protein binding]
GO:0005794 [Golgi apparatus]
GO:0005802 [trans-Golgi network]
GO:0006508 [proteolysis]
GO:0008233 [peptidase activity]
GO:0008236 [serine-type peptidase activity]
GO:0016020 [membrane]
GO:0016485 [protein processing]
GO:0016486 [peptide hormone processing]
GO:0016787 [hydrolase activity]
Show all
785 aa
86.2 kDa
No 1
PCSK7-202
ENSP00000433841
ENST00000524507
Q16549
[Direct mapping] Proprotein convertase subtilisin/kexin type 7
Show all
E9PIW7
[Direct mapping] Proprotein convertase subtilisin/kexin type 7
Show all
Enzymes
   Peptidases
   Serine-type peptidases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0004252 [serine-type endopeptidase activity]
GO:0005515 [protein binding]
GO:0005794 [Golgi apparatus]
GO:0005802 [trans-Golgi network]
GO:0006508 [proteolysis]
GO:0008233 [peptidase activity]
GO:0008236 [serine-type peptidase activity]
GO:0016020 [membrane]
GO:0016485 [protein processing]
GO:0016486 [peptide hormone processing]
GO:0016787 [hydrolase activity]
Show all
785 aa
86.2 kDa
No 1
PCSK7-203
ENSP00000431181
ENST00000525027
E9PMC0
[Direct mapping] Proprotein convertase subtilisin/kexin type 7
Show all
   MEMSAT3 predicted membrane proteins
   Phobius predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   DeepTMHMM predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004252 [serine-type endopeptidase activity]
GO:0006508 [proteolysis]
GO:0008233 [peptidase activity]
GO:0008236 [serine-type peptidase activity]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
Show all
305 aa
33 kDa
No 0
PCSK7-209
ENSP00000433252
ENST00000530269
E9PLM0
[Direct mapping] Proprotein convertase subtilisin/kexin type 7
Show all
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   DeepTMHMM predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016020 [membrane]
Show all
91 aa
9.4 kDa
No 0
PCSK7-211
ENSP00000436459
ENST00000532301
A0A1B0GX40
[Direct mapping] Proprotein convertase subtilisin/kexin type 7
Show all
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   DeepTMHMM predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0016020 [membrane]
Show all
92 aa
9.5 kDa
No 0
PCSK7-215
ENSP00000501995
ENST00000676339
Q16549
[Direct mapping] Proprotein convertase subtilisin/kexin type 7
Show all
Enzymes
   Peptidases
   Serine-type peptidases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000139 [Golgi membrane]
GO:0004252 [serine-type endopeptidase activity]
GO:0005515 [protein binding]
GO:0005794 [Golgi apparatus]
GO:0005802 [trans-Golgi network]
GO:0006508 [proteolysis]
GO:0008233 [peptidase activity]
GO:0008236 [serine-type peptidase activity]
GO:0016020 [membrane]
GO:0016485 [protein processing]
GO:0016486 [peptide hormone processing]
GO:0016787 [hydrolase activity]
Show all
785 aa
86.2 kDa
No 1

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