We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CHRNB2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • CHRNB2
PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CHRNB2
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Cholinergic receptor nicotinic beta 2 subunit
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
FDA approved drug targets
Human disease related genes
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband q21.3
Chromosome location (bp) 154567778 - 154580013
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

2
Ensembl ENSG00000160716 (version 109)
Entrez gene 1141
HGNC HGNC:1962
UniProt P17787 (UniProt - Evidence at protein level)
neXtProt NX_P17787
GeneCards CHRNB2
Antibodypedia CHRNB2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane permeable to sodiun ions.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ion channel, Ligand-gated ion channel, Receptor
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Ion transport, Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

Neuronal acetylcholine receptors are homo- or heteropentameric complexes composed of homologous alpha and beta subunits. They belong to a superfamily of ligand-gated ion channels which allow the flow of sodium and potassium across the plasma membrane in response to ligands such as acetylcholine and nicotine. This gene encodes one of several beta subunits. Mutations in this gene are associated with autosomal dominant nocturnal frontal lobe epilepsy. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CHRNB2-201
ENSP00000357461
ENST00000368476
P17787
[Direct mapping] Neuronal acetylcholine receptor subunit beta-2
Show all
Q5SXY3
[Target identity:100%; Query identity:100%] Cholinergic receptor, nicotinic, beta 2 (Neuronal); cDNA, FLJ94017, Homo sapiens cholinergic receptor, nicotinic, beta polypeptide 2(neuronal) (CHRNB2), mRNA
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
FDA approved drug targets
   Small molecule drugs
Human disease related genes
   Nervous system diseases
   Epilepsy
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0001666 [response to hypoxia]
GO:0004888 [transmembrane signaling receptor activity]
GO:0005216 [ion channel activity]
GO:0005230 [extracellular ligand-gated ion channel activity]
GO:0005231 [excitatory extracellular ligand-gated ion channel activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0005892 [acetylcholine-gated channel complex]
GO:0006811 [ion transport]
GO:0006816 [calcium ion transport]
GO:0006939 [smooth muscle contraction]
GO:0007165 [signal transduction]
GO:0007268 [chemical synaptic transmission]
GO:0007271 [synaptic transmission, cholinergic]
GO:0007601 [visual perception]
GO:0007605 [sensory perception of sound]
GO:0007612 [learning]
GO:0007613 [memory]
GO:0007626 [locomotory behavior]
GO:0008306 [associative learning]
GO:0008542 [visual learning]
GO:0009897 [external side of plasma membrane]
GO:0014059 [regulation of dopamine secretion]
GO:0015276 [ligand-gated ion channel activity]
GO:0015464 [acetylcholine receptor activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0019233 [sensory perception of pain]
GO:0021562 [vestibulocochlear nerve development]
GO:0021631 [optic nerve morphogenesis]
GO:0021771 [lateral geniculate nucleus development]
GO:0021952 [central nervous system projection neuron axonogenesis]
GO:0022848 [acetylcholine-gated cation-selective channel activity]
GO:0030594 [neurotransmitter receptor activity]
GO:0030890 [positive regulation of B cell proliferation]
GO:0032225 [regulation of synaptic transmission, dopaminergic]
GO:0032991 [protein-containing complex]
GO:0033603 [positive regulation of dopamine secretion]
GO:0034220 [ion transmembrane transport]
GO:0035094 [response to nicotine]
GO:0035095 [behavioral response to nicotine]
GO:0035176 [social behavior]
GO:0042053 [regulation of dopamine metabolic process]
GO:0042113 [B cell activation]
GO:0042166 [acetylcholine binding]
GO:0042220 [response to cocaine]
GO:0042320 [regulation of circadian sleep/wake cycle, REM sleep]
GO:0042391 [regulation of membrane potential]
GO:0042734 [presynaptic membrane]
GO:0043005 [neuron projection]
GO:0044853 [plasma membrane raft]
GO:0044877 [protein-containing complex binding]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0045471 [response to ethanol]
GO:0045759 [negative regulation of action potential]
GO:0048814 [regulation of dendrite morphogenesis]
GO:0050877 [nervous system process]
GO:0050890 [cognition]
GO:0050997 [quaternary ammonium group binding]
GO:0051899 [membrane depolarization]
GO:0051963 [regulation of synapse assembly]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0060079 [excitatory postsynaptic potential]
GO:0060084 [synaptic transmission involved in micturition]
GO:0095500 [acetylcholine receptor signaling pathway]
GO:0097060 [synaptic membrane]
GO:0098981 [cholinergic synapse]
GO:0099634 [postsynaptic specialization membrane]
GO:0110165 [cellular anatomical entity]
GO:1901363 [heterocyclic compound binding]
GO:1904315 [transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential]
GO:1905144 [response to acetylcholine]
Show all
502 aa
57 kDa
Yes 4
CHRNB2-205
ENSP00000490474
ENST00000637900
A0A1B0GVD7
[Direct mapping] Neuronal acetylcholine receptor subunit beta-2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Human disease related genes
   Nervous system diseases
   Epilepsy
   DeepTMHMM predicted membrane proteins
Show all
GO:0004888 [transmembrane signaling receptor activity]
GO:0005216 [ion channel activity]
GO:0005230 [extracellular ligand-gated ion channel activity]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0022848 [acetylcholine-gated cation-selective channel activity]
GO:0034220 [ion transmembrane transport]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0060079 [excitatory postsynaptic potential]
GO:0097060 [synaptic membrane]
GO:0110165 [cellular anatomical entity]
Show all
504 aa
57.2 kDa
Yes 4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org