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VPS28
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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Medium
Ovarian stroma cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:154.6 nTPM
HPA:0.0 nTPM
GTEx:154.6 nTPM
FANTOM5:73.7 Scaled Tags Per Million

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA024688Antibody HPA024745
Follicle cells HighMedium
Ovarian stroma cells LowNot detected





OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
overview
Female, age 64
Ovary sample 192
nTPM: 0
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 0
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 0.2
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 0
N/A
Female, age 16
Ovary sample 3663
nTPM: 0
N/A
Female, age 20
Ovary sample 3664
nTPM: 0
N/A
Female, age 32
Ovary sample 3665
nTPM: 0.1

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

154.6
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 154.6
Samples: 180

Max nTPM: 255.4
Min nTPM: 76.4
Std nTPM: 32.6
Median nTPM: 148.5
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 255.4
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 250.4
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 245.0
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 240.8
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 237.3
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 230.8
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 226.1
GTEX-13SLX-2426-SM-664OM 50-59 years, female 224.1
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 221.5
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 215.4
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 213.0
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 208.4
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 205.9
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 200.9
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 198.7
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 198.3
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 197.1
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 197.1
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 196.1
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 195.5
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 193.2
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 190.5
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 190.5
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 190.4
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 189.8
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 189.5
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 189.2
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 188.2
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 188.0
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 187.1
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 186.4
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 185.9
GTEX-14PKV-1226-SM-6871T 20-29 years, female 185.6
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 184.2
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 182.8
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 181.5
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 180.6
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 180.1
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 178.2
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 177.5
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 177.3
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 177.0
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 176.9
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 175.4
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 174.9
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 174.9
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 174.7
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 173.9
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 173.3
GTEX-QVJO-3126-SM-COH22 60-69 years, female 172.8
GTEX-183WM-1926-SM-72D5F 70-79 years, female 170.4
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 168.3
GTEX-RU72-2226-SM-46MUE 50-59 years, female 167.9
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 167.5
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 167.3
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 166.1
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 165.8
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 165.7
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 165.6
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 165.0
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 164.4
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 163.9
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 163.0
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 162.9
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 162.9
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 162.6
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 162.1
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 162.1
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 161.7
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 161.4
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 160.2
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 158.9
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 158.7
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 157.4
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 156.6
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 156.1
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 155.6
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 154.5
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 154.2
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 154.2
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 154.1
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 153.7
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 153.5
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 150.4
GTEX-P78B-1926-SM-3P616 40-49 years, female 149.9
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 149.2
GTEX-S341-0726-SM-4AD5R 40-49 years, female 149.0
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 148.8
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 148.8
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 148.8
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 148.3
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 147.5
GTEX-145ME-1226-SM-5SIB6 40-49 years, female 147.3
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 145.9
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 145.9
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 145.7
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 145.0
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 144.9
GTEX-18D9A-0826-SM-718C1 30-39 years, female 144.7
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 144.4
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 144.1
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 144.0
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 143.6
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 143.3
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 143.1
GTEX-14BIN-1426-SM-664NI 50-59 years, female 142.9
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 142.9
GTEX-WI4N-2526-SM-4OOSE 40-49 years, female 142.9
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 142.4
GTEX-Q734-0726-SM-48TZP 40-49 years, female 141.9
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 141.6
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 141.5
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 141.3
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 141.3
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 141.3
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 141.2
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 140.9
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 140.2
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 139.8
GTEX-11I78-1926-SM-59878 50-59 years, female 139.7
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 139.7
GTEX-15EOM-1526-SM-68723 20-29 years, female 138.8
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 138.4
GTEX-13X6H-1026-SM-5SIBE 50-59 years, female 137.5
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 136.8
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 136.7
GTEX-R55G-1526-SM-48FER 40-49 years, female 136.3
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 135.8
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 134.5
GTEX-QCQG-1426-SM-48U22 50-59 years, female 133.2
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 132.6
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 131.7
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 131.3
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 129.6
GTEX-ZV6S-1426-SM-59HKX 40-49 years, female 129.3
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 129.2
GTEX-14JG6-0626-SM-68716 30-39 years, female 128.9
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 128.7
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 128.5
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 128.3
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 128.3
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 128.2
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 128.2
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 127.8
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 127.4
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 127.3
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 126.4
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 125.5
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 125.0
GTEX-1399S-2126-SM-5J2MH 30-39 years, female 124.7
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 124.5
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 124.5
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 124.3
GTEX-S32W-1226-SM-4AD67 50-59 years, female 124.2
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 123.8
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 123.3
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 122.1
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 121.8
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 121.8
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 121.7
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 121.2
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 121.1
GTEX-1F88F-2126-SM-9KNUK 60-69 years, female 121.0
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 119.3
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 117.9
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 117.4
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 116.1
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 114.8
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 113.4
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 112.6
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 108.4
GTEX-1LVAN-2726-SM-CNPQG 50-59 years, female 107.9
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 106.2
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 105.8
GTEX-1GN1U-2326-SM-9MQK4 50-59 years, female 104.5
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 102.8
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 100.4
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 96.9
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 78.7
GTEX-1GF9X-2426-SM-7SB7W 40-49 years, female 76.4
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

73.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 73.7
FF:10020-101D2 47,75,84 years, female 73.7

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