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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:32.7 nTPM
HPA Brain:49.9 nTPM
GTEx:32.7 nTPM
FANTOM5:42.7 Scaled Tags Per Million
Pig:24.4 nTPM
Mouse:13.5 nTPM
Allen mouse:2.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA048063Antibody HPA054491
Glial cells LowNot detected
Neuronal cells Not detectedMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 46.1
2481 Female, age 94, left hemisphere 56.3
2290 Female, age 72, unknown 51.9
1857 Female, age 85, left hemisphere 48.6
1781 Male, age 74, unknown 44.6
2846 Female, age 79, unknown 44.0
2288 Male, age 75, left hemisphere 42.0
1854 Male, age 80, left hemisphere 41.3
2289 Male, age 61, right hemisphere 40.4
Globus pallidus, externus
nTPM: 49.9
2567 Female, age 72, unknown 57.9
2646 Male, age 61, right hemisphere 57.1
2772 Female, age 79, unknown 45.9
1996 Male, age 80, right hemisphere 45.4
2395 Male, age 75, both hemispheres 43.3
Globus pallidus, internus
nTPM: 48.6
2483 Female, age 94, right hemisphere 60.1
2566 Female, age 72, unknown 49.5
1818 Male, age 74, unknown 48.4
2111 Female, age 85, right hemisphere 47.7
2287 Male, age 75, right hemisphere 46.2
2778 Female, age 91, both hemispheres 44.1
2037 Male, age 80, right hemisphere 43.9
Nucleus accumbens
nTPM: 46.3
1783 Male, age 74, unknown 50.1
2391 Female, age 94, left hemisphere 49.3
1806 Female, age 85, left hemisphere 48.6
2824 Male, age 61, right hemisphere 46.6
1856 Female, age 91, right hemisphere 46.0
2732 Male, age 80, right hemisphere 44.6
2286 Male, age 75, left hemisphere 42.5
2698 Female, age 72, unknown 42.4
Nucleus basalis of Meynert
nTPM: 47.3
2569 Male, age 61, both hemispheres 62.8
2484 Female, age 94, left hemisphere 49.6
2821 Male, age 75, both hemispheres 39.3
2393 Male, age 80, right hemisphere 37.6
Nucleus of the diagonal band
nTPM: 41.5
1979 Male, age 74, unknown 45.0
2775 Male, age 80, right hemisphere 43.2
1812 Female, age 91, both hemispheres 40.9
2195 Female, age 85, both hemispheres 40.0
2029 Male, age 61, right hemisphere 38.4
Putamen
nTPM: 47.8
2647 Male, age 75, left hemisphere 60.8
2489 Female, age 72, unknown 51.0
2466 Female, age 79, unknown 48.3
2482 Female, age 94, left hemisphere 46.9
1829 Male, age 74, unknown 46.7
1937 Female, age 91, right hemisphere 43.9
1838 Male, age 80, right hemisphere 37.1
Septal nuclei
nTPM: 41.5
2031 Female, age 72, unknown 47.9
1960 Male, age 74, unknown 47.1
2059 Female, age 85, both hemispheres 43.7
2394 Male, age 61, left hemisphere 41.6
2009 Female, age 91, both hemispheres 38.2
2199 Male, age 80, right hemisphere 38.1
2629 Female, age 94, right hemisphere 34.2
Stria terminalis, bed nucleus
nTPM: 43.9
2201 Male, age 74, unknown 47.6
1974 Female, age 91, both hemispheres 44.7
2486 Female, age 94, both hemispheres 39.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 29.2
Samples: 246

Max nTPM: 44.5
Min nTPM: 14.9
Std nTPM: 5.3
Median nTPM: 29.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 44.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 44.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 44.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 43.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 42.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 41.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 41.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 40.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 40.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 39.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 39.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 39.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 38.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 38.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 38.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 38.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 38.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 37.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 37.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 37.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 37.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 37.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 37.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 36.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 36.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 36.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 36.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 36.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 36.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 36.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 36.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 35.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 35.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 34.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 34.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 34.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 34.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 34.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 34.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 33.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 33.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 33.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 33.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 33.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 33.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 33.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 33.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 33.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 32.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 32.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 32.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 32.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 32.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 32.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 32.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 32.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 32.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 32.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 32.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 32.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 32.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 32.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 32.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 31.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 31.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 31.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 31.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 31.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 31.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 31.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 31.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 31.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 31.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 31.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 31.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 31.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 31.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 31.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 31.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 31.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 31.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 30.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 30.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 30.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 30.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 30.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 30.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 30.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 30.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 30.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 30.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 30.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 30.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 30.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 30.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 30.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 30.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 30.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 30.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 30.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 29.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 29.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 29.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 29.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 29.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 29.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 29.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 29.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 29.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 29.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 29.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 29.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 29.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 29.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 29.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 29.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 29.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 29.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 29.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 29.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 29.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 29.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 29.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 28.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 28.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 28.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 28.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 28.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 28.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 28.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 28.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 28.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 28.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 28.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 28.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 28.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 28.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 28.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 28.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 28.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 28.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 28.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 28.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 28.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 27.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 27.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 27.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 27.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 27.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 27.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 27.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 27.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 27.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 27.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 27.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 27.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 27.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 27.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 27.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 27.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 27.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 27.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 27.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 27.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 26.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 26.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 26.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 26.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 26.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 26.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 26.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 26.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 26.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 26.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 26.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 26.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 26.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 25.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 25.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 25.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 25.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 25.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 25.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 25.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 25.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 25.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 25.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 25.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 25.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 25.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 25.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 25.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 25.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 25.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 24.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 24.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 24.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 24.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 24.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 24.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 24.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 24.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 24.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 24.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 24.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 24.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 24.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 24.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 23.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 23.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 23.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 23.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 23.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 23.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 23.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 23.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 22.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 22.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 22.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 22.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 22.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 22.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 22.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 22.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 22.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 22.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 22.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 22.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 21.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 21.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 21.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 21.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 20.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 20.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 19.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 19.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 19.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 19.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 19.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 19.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 18.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 18.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 18.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 18.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 17.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 14.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 32.7
Samples: 246

Max nTPM: 60.9
Min nTPM: 5.4
Std nTPM: 8.1
Median nTPM: 33.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 60.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 52.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 51.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 50.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 50.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 49.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 47.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 47.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 46.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 46.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 46.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 45.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 45.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 45.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 45.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 45.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 44.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 44.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 44.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 44.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 44.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 43.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 43.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 43.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 43.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 43.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 43.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 43.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 42.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 42.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 41.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 41.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 41.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 41.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 41.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 41.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 41.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 40.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 40.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 40.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 40.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 40.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 40.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 40.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 40.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 39.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 39.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 39.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 39.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 39.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 38.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 38.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 38.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 38.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 38.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 38.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 38.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 38.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 38.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 38.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 37.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 37.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 37.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 37.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 37.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 37.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 37.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 37.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 37.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 37.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 37.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 37.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 37.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 36.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 36.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 36.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 36.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 36.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 36.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 36.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 36.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 36.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 36.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 36.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 36.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 36.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 35.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 35.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 35.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 35.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 35.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 35.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 35.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 35.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 34.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 34.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 34.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 34.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 34.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 34.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 34.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 34.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 34.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 34.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 34.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 34.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 33.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 33.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 33.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 33.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 33.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 33.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 33.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 33.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 33.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 33.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 33.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 33.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 33.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 33.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 33.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 33.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 33.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 33.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 33.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 32.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 32.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 32.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 32.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 32.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 32.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 32.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 32.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 32.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 31.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 31.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 31.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 31.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 31.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 31.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 31.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 31.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 31.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 31.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 31.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 31.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 30.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 30.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 30.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 30.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 30.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 30.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 30.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 30.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 30.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 29.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 29.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 29.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 29.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 29.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 29.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 29.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 29.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 29.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 29.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 28.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 28.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 28.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 28.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 28.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 28.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 28.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 28.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 28.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 28.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 28.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 28.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 28.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 27.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 27.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 27.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 27.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 27.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 27.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 27.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 27.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 27.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 26.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 26.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 26.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 26.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 26.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 26.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 26.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 25.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 25.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 25.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 25.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 25.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 25.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 25.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 25.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 25.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 25.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 24.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 24.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 24.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 24.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 23.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 23.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 23.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 23.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 23.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 23.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 23.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 23.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 23.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 22.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 22.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 22.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 22.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 21.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 21.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 21.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 21.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 21.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 20.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 20.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 20.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 20.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 20.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 20.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 19.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 19.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 19.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 19.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 18.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 18.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 18.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 18.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 18.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 17.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 17.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 16.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 9.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 5.4
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Brain - Putamen (basal ganglia)
Average nTPM: 28.1
Samples: 205

Max nTPM: 44.1
Min nTPM: 16.5
Std nTPM: 5.4
Median nTPM: 27.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 44.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 43.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 40.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 40.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 40.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 39.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 37.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 37.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 37.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 37.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 37.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 37.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 36.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 36.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 36.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 36.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 36.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 35.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 35.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 35.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 35.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 35.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 35.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 34.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 34.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 34.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 34.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 34.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 34.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 34.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 34.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 34.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 33.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 33.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 33.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 33.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 33.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 33.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 32.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 32.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 32.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 32.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 32.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 32.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 32.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 32.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 32.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 31.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 31.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 31.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 31.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 31.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 31.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 31.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 31.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 31.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 31.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 31.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 31.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 31.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 31.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 31.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 31.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 30.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 30.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 30.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 30.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 30.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 30.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 30.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 30.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 30.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 30.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 30.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 30.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 29.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 29.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 29.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 29.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 29.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 29.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 29.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 29.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 29.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 29.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 29.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 29.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 29.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 29.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 28.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 28.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 28.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 28.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 28.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 28.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 28.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 28.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 28.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 28.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 28.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 27.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 27.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 27.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 27.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 27.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 27.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 27.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 27.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 27.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 27.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 27.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 27.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 27.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 27.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 27.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 27.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 27.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 26.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 26.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 26.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 26.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 26.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 26.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 26.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 26.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 26.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 26.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 26.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 26.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 26.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 26.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 26.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 25.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 25.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 25.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 25.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 25.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 25.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 25.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 25.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 25.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 25.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 25.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 25.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 25.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 24.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 24.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 24.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 24.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 24.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 24.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 24.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 24.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 24.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 24.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 24.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 24.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 23.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 23.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 23.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 23.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 23.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 23.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 23.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 23.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 23.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 23.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 23.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 23.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 23.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 23.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 22.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 22.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 22.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 22.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 22.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 22.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 22.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 21.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 21.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 21.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 20.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 20.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 20.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 20.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 20.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 20.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 20.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 20.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 19.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 19.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 19.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 19.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 19.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 19.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 18.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 18.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 18.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 18.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 17.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 17.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 17.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 16.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 16.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 16.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

42.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 28.4
FF:10164-103B2 76 years, female 28.4
Nucleus accumbens
Scaled Tags Per Million: 31.3
FF:10037-101F1 23-56 years, mixed 31.3
Putamen
Scaled Tags Per Million: 42.7
FF:10176-103C5 60 years, female 42.7
Globus pallidus
Scaled Tags Per Million: 25.9
FF:10161-103A8 76 years, female 34.6
FF:10175-103C4 60 years, female 17.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.4
Pig sample Sample description nTPM
Caudate
nTPM: 24.4
Samples: 4

Max nTPM: 26.3
Min nTPM: 21.9
Sample A Female 21.9
Sample B Female 26.3
Sample C Male 25.4
Sample D Male 24.1
Putamen
nTPM: 23.9
Samples: 4

Max nTPM: 26.4
Min nTPM: 21.9
Sample A Female 21.9
Sample B Female 22.4
Sample C Male 26.4
Sample D Male 24.7
Septum
nTPM: 23.9
Samples: 4

Max nTPM: 25.7
Min nTPM: 22.2
Sample A Female 25.7
Sample B Female 24.3
Sample C Male 23.3
Sample D Male 22.2
Ventral pallidum
nTPM: 22.7
Samples: 4

Max nTPM: 23.0
Min nTPM: 22.1
Sample A Female 22.1
Sample B Female 22.9
Sample C Male 22.8
Sample D Male 23.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 11.3
Samples: 4

Max nTPM: 12.7
Min nTPM: 9.7
Sample A Male 12.1
Sample B Male 12.7
Sample C Female 9.7
Sample D Female 10.8
Septum
nTPM: 13.5
Samples: 4

Max nTPM: 15.4
Min nTPM: 12.3
Sample A Male 15.4
Sample B Male 13.1
Sample C Female 12.3
Sample D Female 13.3
Ventral forebrain
nTPM: 12.7
Samples: 4

Max nTPM: 13.8
Min nTPM: 11.8
Sample A Male 13.8
Sample B Male 11.8
Sample C Female 12.8
Sample D Female 12.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.5
70300150 Antisense, RP_050602_04_G12, Mouse strain C57BL/6J (56 days, male) 3.6
69169923 Antisense, RP_050321_04_E01, Mouse strain C57BL/6J (56 days, male) 1.3
Pallidum
Expression energy: 1.9
70300150 Antisense, RP_050602_04_G12, Mouse strain C57BL/6J (56 days, male) 2.1
69169923 Antisense, RP_050321_04_E01, Mouse strain C57BL/6J (56 days, male) 1.7

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