HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:12.4 nTPM
HPA Brain:33.8 nTPM
GTEx:12.4 nTPM
FANTOM5:6.9 Scaled Tags Per Million
Pig:10.9 nTPM
Mouse:9.4 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021047
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 33.8
Sample id Sample description nTPM
Hippocampus
nTPM: 33.8
2621 Female, age 67, right hemisphere 36.7
2148 Female, age 91, left hemisphere 36.6
1898 Male, age 80, left hemisphere 33.5
2529 Female, age 94, left hemisphere 33.2
1855 Male, age 76, left hemisphere 32.8
1911 Female, age 85, right hemisphere 30.3
Dentate gyrus
nTPM: 33.3
2531 Female, age 67, both hemispheres 39.7
2530 Female, age 94, left hemisphere 36.4
1927 Female, age 91, both hemispheres 33.7
2010 Male, age 76, both hemispheres 32.1
2528 Male, age 74, both hemispheres 30.1
2246 Female, age 85, both hemispheres 27.8
Entorhinal gyrus
nTPM: 30.7
2686 Male, age 75, right hemisphere 34.1
2764 Male, age 80, right hemisphere 34.1
1787 Male, age 76, left hemisphere 32.5
1938 Female, age 85, left hemisphere 28.8
2117 Female, age 91, right hemisphere 27.7
2613 Female, age 94, left hemisphere 27.0
Hippocampus, CA1
nTPM: 31.6
2749 Male, age 80, left hemisphere 37.5
2527 Male, age 74, both hemispheres 31.0
1873 Female, age 85, both hemispheres 30.5
2082 Female, age 91, right hemisphere 29.7
2045 Male, age 76, both hemispheres 29.3
Hippocampus, CA2
nTPM: 32.0
1963 Male, age 80, left hemisphere 42.0
1892 Male, age 76, both hemispheres 31.7
2437 Female, age 94, left hemisphere 31.0
2113 Female, age 91, right hemisphere 30.3
2249 Male, age 74, both hemispheres 28.6
1940 Female, age 85, left hemisphere 28.3
Hippocampus, CA3
nTPM: 33.4
2861 Female, age 67, both hemispheres 43.1
2620 Female, age 94, left hemisphere 40.8
2137 Male, age 80, left hemisphere 34.9
1867 Male, age 76, both hemispheres 29.7
1891 Female, age 85, both hemispheres 27.7
2436 Male, age 74, both hemispheres 24.2
Parahippocampal cortex
nTPM: 27.0
2245 Female, age 91, both hemispheres 31.7
1990 Female, age 91, right hemisphere 30.0
2622 Female, age 67, right hemisphere 27.7
1850 Male, age 80, both hemispheres 27.4
1933 Female, age 85, both hemispheres 27.0
2018 Male, age 76, both hemispheres 27.0
2532 Female, age 72, left hemisphere 25.7
2250 Female, age 67, right hemisphere 25.5
2693 Female, age 94, both hemispheres 24.6
2692 Male, age 74, both hemispheres 23.3
Perirhinal gyrus
nTPM: 28.2
1794 Male, age 80, right hemisphere 31.5
1841 Female, age 85, right hemisphere 28.6
1847 Female, age 91, left hemisphere 28.4
2848 Male, age 76, right hemisphere 26.6
2521 Female, age 94, right hemisphere 25.7
Subiculum
nTPM: 27.4
2729 Female, age 91, right hemisphere 32.0
1977 Female, age 85, both hemispheres 29.8
1901 Male, age 80, both hemispheres 27.7
2619 Male, age 74, both hemispheres 27.5
2042 Male, age 76, both hemispheres 25.2
2438 Female, age 94, left hemisphere 22.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 12.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.4
Samples: 197

Max nTPM: 22.3
Min nTPM: 4.7
Std nTPM: 3.1
Median nTPM: 11.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 22.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 22.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 22.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 20.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 19.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 19.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 19.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 19.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 18.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 18.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 18.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 6.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.9
FF:10153-102I9 76 years, female 7.6
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 10.9
Pig sample Sample description nTPM
Subiculum
nTPM: 10.0
Samples: 4

Max nTPM: 11.8
Min nTPM: 8.2
Sample A Female 11.8
Sample B Female 9.8
Sample C Male 10.1
Sample D Male 8.2
Dorsal hippocampus
nTPM: 9.6
Samples: 4

Max nTPM: 12.2
Min nTPM: 7.0
Sample A Female 12.2
Sample B Female 11.1
Sample C Male 8.1
Sample D Male 7.0
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.3
Sample A Female 9.8
Sample B Female 9.3
Sample C Male 10.3
Sample D Male 8.3
Ventral hippocampus
nTPM: 10.9
Samples: 4

Max nTPM: 13.6
Min nTPM: 8.6
Sample A Female 11.0
Sample B Female 8.6
Sample C Male 13.6
Sample D Male 10.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 9.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 10.2
Min nTPM: 7.6
Sample A Male 10.2
Sample B Male 7.6
Sample C Female 9.6
Sample D Female 10.0
Hippocampal formation
nTPM: 8.8
Samples: 4

Max nTPM: 9.5
Min nTPM: 7.9
Sample A Male 7.9
Sample B Male 9.2
Sample C Female 8.6
Sample D Female 9.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71612178 Antisense, RP_050927_02_C03, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org