HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:46.9 nTPM
HPA Brain:26.5 nTPM
GTEx:46.9 nTPM
FANTOM5:25.4 Scaled Tags Per Million
Pig:23.0 nTPM
Mouse:48.5 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052134
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 26.5
Sample id Sample description nTPM
Hippocampus
nTPM: 24.8
1898 Male, age 80, left hemisphere 26.1
1855 Male, age 76, left hemisphere 25.6
2148 Female, age 91, left hemisphere 25.0
2621 Female, age 67, right hemisphere 25.0
2529 Female, age 94, left hemisphere 23.8
1911 Female, age 85, right hemisphere 23.6
Dentate gyrus
nTPM: 26.5
2010 Male, age 76, both hemispheres 30.2
2530 Female, age 94, left hemisphere 28.4
2531 Female, age 67, both hemispheres 28.3
2528 Male, age 74, both hemispheres 24.8
1927 Female, age 91, both hemispheres 24.1
2246 Female, age 85, both hemispheres 22.7
Entorhinal gyrus
nTPM: 21.1
1787 Male, age 76, left hemisphere 24.0
1938 Female, age 85, left hemisphere 21.2
2613 Female, age 94, left hemisphere 20.9
2764 Male, age 80, right hemisphere 20.9
2117 Female, age 91, right hemisphere 19.8
2686 Male, age 75, right hemisphere 19.8
Hippocampus, CA1
nTPM: 25.9
2749 Male, age 80, left hemisphere 34.1
1873 Female, age 85, both hemispheres 26.3
2045 Male, age 76, both hemispheres 24.2
2527 Male, age 74, both hemispheres 23.1
2082 Female, age 91, right hemisphere 21.6
Hippocampus, CA2
nTPM: 24.1
1963 Male, age 80, left hemisphere 32.2
1892 Male, age 76, both hemispheres 25.7
2437 Female, age 94, left hemisphere 23.6
2249 Male, age 74, both hemispheres 21.8
2113 Female, age 91, right hemisphere 21.1
1940 Female, age 85, left hemisphere 20.0
Hippocampus, CA3
nTPM: 24.6
2861 Female, age 67, both hemispheres 34.9
2137 Male, age 80, left hemisphere 28.1
1867 Male, age 76, both hemispheres 24.0
2436 Male, age 74, both hemispheres 21.9
2620 Female, age 94, left hemisphere 20.1
1891 Female, age 85, both hemispheres 18.3
Parahippocampal cortex
nTPM: 19.8
2245 Female, age 91, both hemispheres 23.0
2622 Female, age 67, right hemisphere 22.6
2250 Female, age 67, right hemisphere 21.3
2018 Male, age 76, both hemispheres 21.0
1933 Female, age 85, both hemispheres 20.2
2532 Female, age 72, left hemisphere 19.5
1990 Female, age 91, right hemisphere 18.8
2692 Male, age 74, both hemispheres 18.7
2693 Female, age 94, both hemispheres 18.0
1850 Male, age 80, both hemispheres 15.5
Perirhinal gyrus
nTPM: 19.7
2521 Female, age 94, right hemisphere 23.5
1847 Female, age 91, left hemisphere 20.2
2848 Male, age 76, right hemisphere 18.8
1794 Male, age 80, right hemisphere 18.2
1841 Female, age 85, right hemisphere 17.8
Subiculum
nTPM: 20.7
2042 Male, age 76, both hemispheres 22.4
2729 Female, age 91, right hemisphere 22.2
1901 Male, age 80, both hemispheres 21.9
1977 Female, age 85, both hemispheres 21.3
2619 Male, age 74, both hemispheres 19.3
2438 Female, age 94, left hemisphere 17.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 46.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.9
Samples: 197

Max nTPM: 98.8
Min nTPM: 19.1
Std nTPM: 16.2
Median nTPM: 44.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 98.8
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 94.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 86.2
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 81.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 81.1
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 79.8
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 79.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 77.5
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 76.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 76.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 76.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 25.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.4
FF:10153-102I9 76 years, female 32.2
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 23.0
Pig sample Sample description nTPM
Subiculum
nTPM: 17.8
Samples: 4

Max nTPM: 22.6
Min nTPM: 15.6
Sample A Female 22.6
Sample B Female 16.7
Sample C Male 16.3
Sample D Male 15.6
Dorsal hippocampus
nTPM: 23.0
Samples: 4

Max nTPM: 27.7
Min nTPM: 18.2
Sample A Female 27.7
Sample B Female 26.0
Sample C Male 18.2
Sample D Male 20.1
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 20.2
Min nTPM: 15.0
Sample A Female 17.3
Sample B Female 17.4
Sample C Male 20.2
Sample D Male 15.0
Ventral hippocampus
nTPM: 19.2
Samples: 4

Max nTPM: 22.3
Min nTPM: 15.8
Sample A Female 16.5
Sample B Female 15.8
Sample C Male 22.2
Sample D Male 22.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 48.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.4
Samples: 4

Max nTPM: 38.8
Min nTPM: 35.9
Sample A Male 37.5
Sample B Male 35.9
Sample C Female 38.8
Sample D Female 37.4
Hippocampal formation
nTPM: 48.5
Samples: 4

Max nTPM: 51.3
Min nTPM: 46.4
Sample A Male 47.8
Sample B Male 46.4
Sample C Female 51.3
Sample D Female 48.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
71489801 Antisense, RP_050614_04_E09, Mouse strain C57BL/6J (56 days, male) 2.6

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