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RPL8
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:403.7 nTPM
FANTOM5:148.2 Scaled Tags Per Million
Pig:0.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA045095Antibody HPA050165
Glial cells MediumMedium
Neuronal cells HighMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

403.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 403.7
Samples: 246

Max nTPM: 1261.5
Min nTPM: 157.2
Std nTPM: 114.9
Median nTPM: 392.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1261.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 734.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 727.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 695.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 679.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 668.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 661.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 651.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 634.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 617.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 615.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 615.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 603.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 596.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 592.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 584.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 571.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 567.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 564.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 564.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 554.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 536.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 536.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 530.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 529.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 526.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 522.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 521.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 521.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 520.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 520.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 514.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 505.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 504.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 503.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 497.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 497.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 495.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 492.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 491.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 490.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 488.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 488.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 483.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 482.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 481.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 479.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 478.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 477.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 477.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 477.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 475.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 472.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 472.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 470.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 469.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 469.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 467.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 465.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 464.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 462.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 461.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 454.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 449.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 448.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 447.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 446.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 446.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 445.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 445.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 444.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 444.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 442.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 442.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 441.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 440.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 438.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 438.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 438.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 437.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 437.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 437.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 431.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 429.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 428.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 428.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 427.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 426.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 424.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 424.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 421.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 421.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 421.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 419.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 419.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 418.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 418.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 418.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 417.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 416.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 416.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 414.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 414.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 412.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 411.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 411.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 408.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 408.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 405.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 405.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 403.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 402.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 400.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 400.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 400.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 398.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 397.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 397.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 396.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 395.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 394.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 394.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 392.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 392.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 391.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 391.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 390.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 389.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 388.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 388.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 386.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 384.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 383.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 382.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 378.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 373.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 372.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 372.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 371.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 370.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 368.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 367.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 365.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 363.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 362.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 362.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 361.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 361.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 361.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 359.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 357.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 356.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 356.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 355.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 355.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 352.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 352.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 352.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 350.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 349.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 348.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 348.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 348.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 348.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 346.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 346.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 346.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 344.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 342.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 341.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 340.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 340.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 338.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 338.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 336.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 336.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 336.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 334.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 334.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 332.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 332.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 331.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 331.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 331.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 328.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 326.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 326.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 325.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 324.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 322.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 322.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 319.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 318.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 317.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 316.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 314.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 314.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 314.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 313.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 311.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 311.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 310.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 310.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 309.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 309.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 305.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 304.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 304.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 304.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 303.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 303.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 301.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 299.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 299.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 297.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 294.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 294.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 292.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 288.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 288.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 288.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 287.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 286.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 285.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 282.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 280.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 278.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 272.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 271.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 269.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 268.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 268.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 261.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 260.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 260.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 259.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 255.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 250.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 241.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 235.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 227.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 227.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 220.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 205.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 181.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 157.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

148.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 148.2
FF:10164-103B2 76 years, female 148.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.2
Pig sample Sample description nTPM
Caudate
nTPM: 0.2
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.1
Sample A Female 0.1
Sample B Female 0.1
Sample C Male 0.1
Sample D Male 0.4

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