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AP2M1
HPA
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  • SUMMARY

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  • STRUCT & INT

  • AP2M1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

AP2M1
Synonyms AP50, CLAPM1, mu2
Gene descriptioni

Full gene name according to HGNC.

Adaptor related protein complex 2 subunit mu 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Plasma proteins
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 3
Cytoband q27.1
Chromosome location (bp) 184174689 - 184184214
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

11
Ensembl ENSG00000161203 (version 109)
Entrez gene 1173
HGNC HGNC:564
UniProt Q96CW1 (UniProt - Evidence at protein level)
neXtProt NX_Q96CW1
GeneCards AP2M1
Antibodypedia AP2M1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Component of the adaptor protein complex 2 (AP-2) 1, 2, 3, 4, 5, 6. Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways 7, 8, 9, 10, 11, 12. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation 13, 14, 15, 16, 17, 18. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome 19, 20, 21, 22, 23, 24. The clathrin lattice serves as a mechanical scaffold but is itself unable to bind directly to membrane components 25, 26, 27, 28, 29, 30. Clathrin-associated adaptor protein (AP) complexes which can bind directly to both the clathrin lattice and to the lipid and protein components of membranes are considered to be the major clathrin adaptors contributing the CCV formation 31, 32, 33, 34, 35, 36. AP-2 also serves as a cargo receptor to selectively sort the membrane proteins involved in receptor-mediated endocytosis 37. AP-2 seems to play a role in the recycling of synaptic vesicle membranes from the presynaptic surface 38, 39, 40, 41, 42, 43. AP-2 recognizes Y-X-X-[FILMV] (Y-X-X-Phi) and [ED]-X-X-X-L-[LI] endocytosis signal motifs within the cytosolic tails of transmembrane cargo molecules (By similarity). AP-2 may also play a role in maintaining normal post-endocytic trafficking through the ARF6-regulated, non-clathrin pathway 44. During long-term potentiation in hippocampal neurons, AP-2 is responsible for the endocytosis of ADAM10 45. The AP-2 mu subunit binds to transmembrane cargo proteins; it recognizes the Y-X-X-Phi motifs (By similarity). The surface region interacting with to the Y-X-X-Phi motif is inaccessible in cytosolic AP-2, but becomes accessible through a conformational change following phosphorylation of AP-2 mu subunit at Thr-156 in membrane-associated AP-2 46. The membrane-specific phosphorylation event appears to involve assembled clathrin which activates the AP-2 mu kinase AAK1 47. Plays a role in endocytosis of frizzled family members upon Wnt signaling (By similarity).... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Endocytosis, Protein transport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Lipid-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a subunit of the heterotetrameric coat assembly protein complex 2 (AP2), which belongs to the adaptor complexes medium subunits family. The encoded protein is required for the activity of a vacuolar ATPase, which is responsible for proton pumping occurring in the acidification of endosomes and lysosomes. The encoded protein may also play an important role in regulating the intracellular trafficking and function of CTLA-4 protein. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2015]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
AP2M1-201
ENSP00000292807
ENST00000292807
Q96CW1
[Direct mapping] AP-2 complex subunit mu
Show all
Transporters
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002092 [positive regulation of receptor internalization]
GO:0005048 [signal sequence binding]
GO:0005515 [protein binding]
GO:0005765 [lysosomal membrane]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006886 [intracellular protein transport]
GO:0006897 [endocytosis]
GO:0006900 [vesicle budding from membrane]
GO:0008289 [lipid binding]
GO:0009898 [cytoplasmic side of plasma membrane]
GO:0012505 [endomembrane system]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030119 [AP-type membrane coat adaptor complex]
GO:0030122 [AP-2 adaptor complex]
GO:0030131 [clathrin adaptor complex]
GO:0030666 [endocytic vesicle membrane]
GO:0030669 [clathrin-coated endocytic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0031623 [receptor internalization]
GO:0035615 [clathrin adaptor activity]
GO:0036020 [endolysosome membrane]
GO:0044325 [transmembrane transporter binding]
GO:0045202 [synapse]
GO:0045334 [clathrin-coated endocytic vesicle]
GO:0048488 [synaptic vesicle endocytosis]
GO:0050750 [low-density lipoprotein particle receptor binding]
GO:0051649 [establishment of localization in cell]
GO:0065003 [protein-containing complex assembly]
GO:0070062 [extracellular exosome]
GO:0072583 [clathrin-dependent endocytosis]
GO:0097494 [regulation of vesicle size]
GO:0097718 [disordered domain specific binding]
GO:0098794 [postsynapse]
GO:0098884 [postsynaptic neurotransmitter receptor internalization]
GO:0098894 [extrinsic component of presynaptic endocytic zone membrane]
GO:0098978 [glutamatergic synapse]
GO:1900244 [positive regulation of synaptic vesicle endocytosis]
GO:1903077 [negative regulation of protein localization to plasma membrane]
Show all
435 aa
49.7 kDa
No 0
AP2M1-202
ENSP00000371894
ENST00000382456
Q96CW1
[Direct mapping] AP-2 complex subunit mu
Show all
Transporters
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005048 [signal sequence binding]
GO:0005515 [protein binding]
GO:0005765 [lysosomal membrane]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006886 [intracellular protein transport]
GO:0006897 [endocytosis]
GO:0006900 [vesicle budding from membrane]
GO:0008289 [lipid binding]
GO:0009898 [cytoplasmic side of plasma membrane]
GO:0012505 [endomembrane system]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030119 [AP-type membrane coat adaptor complex]
GO:0030122 [AP-2 adaptor complex]
GO:0030131 [clathrin adaptor complex]
GO:0030666 [endocytic vesicle membrane]
GO:0030669 [clathrin-coated endocytic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0031623 [receptor internalization]
GO:0035615 [clathrin adaptor activity]
GO:0036020 [endolysosome membrane]
GO:0044325 [transmembrane transporter binding]
GO:0045334 [clathrin-coated endocytic vesicle]
GO:0048488 [synaptic vesicle endocytosis]
GO:0050750 [low-density lipoprotein particle receptor binding]
GO:0051649 [establishment of localization in cell]
GO:0065003 [protein-containing complex assembly]
GO:0070062 [extracellular exosome]
GO:0072583 [clathrin-dependent endocytosis]
GO:0097494 [regulation of vesicle size]
GO:0098794 [postsynapse]
GO:0098884 [postsynaptic neurotransmitter receptor internalization]
GO:1903077 [negative regulation of protein localization to plasma membrane]
Show all
433 aa
49.4 kDa
No 0
AP2M1-203
ENSP00000403362
ENST00000411763
E9PFW3
[Direct mapping] AP-2 complex subunit mu
Show all
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006886 [intracellular protein transport]
GO:0006897 [endocytosis]
GO:0008289 [lipid binding]
GO:0012505 [endomembrane system]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030119 [AP-type membrane coat adaptor complex]
GO:0030131 [clathrin adaptor complex]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0051649 [establishment of localization in cell]
Show all
460 aa
52.3 kDa
No 0
AP2M1-204
ENSP00000402051
ENST00000427072
C9JPV8
[Direct mapping] AP-2 complex subunit mu
Show all
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006886 [intracellular protein transport]
GO:0006897 [endocytosis]
GO:0008289 [lipid binding]
GO:0012505 [endomembrane system]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030119 [AP-type membrane coat adaptor complex]
GO:0030131 [clathrin adaptor complex]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0051649 [establishment of localization in cell]
Show all
458 aa
52 kDa
No 0
AP2M1-205
ENSP00000404326
ENST00000431779
C9JGT8
[Direct mapping] AP-2 complex subunit mu
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006886 [intracellular protein transport]
GO:0006897 [endocytosis]
GO:0008289 [lipid binding]
GO:0012505 [endomembrane system]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030119 [AP-type membrane coat adaptor complex]
GO:0030131 [clathrin adaptor complex]
GO:0031410 [cytoplasmic vesicle]
GO:0051649 [establishment of localization in cell]
Show all
437 aa
49.9 kDa
No 0
AP2M1-207
ENSP00000409081
ENST00000439647
Q96CW1
[Direct mapping] AP-2 complex subunit mu
Show all
Transporters
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005048 [signal sequence binding]
GO:0005515 [protein binding]
GO:0005765 [lysosomal membrane]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006886 [intracellular protein transport]
GO:0006897 [endocytosis]
GO:0006900 [vesicle budding from membrane]
GO:0008289 [lipid binding]
GO:0009898 [cytoplasmic side of plasma membrane]
GO:0012505 [endomembrane system]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030119 [AP-type membrane coat adaptor complex]
GO:0030122 [AP-2 adaptor complex]
GO:0030131 [clathrin adaptor complex]
GO:0030666 [endocytic vesicle membrane]
GO:0030669 [clathrin-coated endocytic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0031623 [receptor internalization]
GO:0035615 [clathrin adaptor activity]
GO:0036020 [endolysosome membrane]
GO:0044325 [transmembrane transporter binding]
GO:0045334 [clathrin-coated endocytic vesicle]
GO:0048488 [synaptic vesicle endocytosis]
GO:0050750 [low-density lipoprotein particle receptor binding]
GO:0051649 [establishment of localization in cell]
GO:0065003 [protein-containing complex assembly]
GO:0070062 [extracellular exosome]
GO:0072583 [clathrin-dependent endocytosis]
GO:0097494 [regulation of vesicle size]
GO:0098794 [postsynapse]
GO:0098884 [postsynaptic neurotransmitter receptor internalization]
GO:1903077 [negative regulation of protein localization to plasma membrane]
Show all
433 aa
49.4 kDa
No 0
AP2M1-208
ENSP00000416688
ENST00000442686
H7C4C3
[Direct mapping] AP-2 complex subunit mu
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006886 [intracellular protein transport]
GO:0006897 [endocytosis]
GO:0008289 [lipid binding]
GO:0012505 [endomembrane system]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030119 [AP-type membrane coat adaptor complex]
GO:0030131 [clathrin adaptor complex]
GO:0031410 [cytoplasmic vesicle]
GO:0051649 [establishment of localization in cell]
Show all
432 aa
49.4 kDa
No 0
AP2M1-209
ENSP00000402592
ENST00000448139
C9JTK4
[Direct mapping] AP-2 complex subunit mu
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006886 [intracellular protein transport]
GO:0006897 [endocytosis]
GO:0008289 [lipid binding]
GO:0012505 [endomembrane system]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030119 [AP-type membrane coat adaptor complex]
GO:0030131 [clathrin adaptor complex]
GO:0031410 [cytoplasmic vesicle]
GO:0051649 [establishment of localization in cell]
Show all
393 aa
44.9 kDa
No 0
AP2M1-210
ENSP00000404031
ENST00000455925
C9JJD3
[Direct mapping] AP-2 complex subunit mu
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006886 [intracellular protein transport]
GO:0006897 [endocytosis]
GO:0008289 [lipid binding]
GO:0012505 [endomembrane system]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030119 [AP-type membrane coat adaptor complex]
GO:0030131 [clathrin adaptor complex]
GO:0031410 [cytoplasmic vesicle]
GO:0051649 [establishment of localization in cell]
Show all
383 aa
43.6 kDa
No 0
AP2M1-222
ENSP00000481563
ENST00000621863
Q96CW1
[Direct mapping] AP-2 complex subunit mu
Show all
A0A087WY71
[Direct mapping] AP-2 complex subunit mu
Show all
Transporters
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005048 [signal sequence binding]
GO:0005515 [protein binding]
GO:0005765 [lysosomal membrane]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006886 [intracellular protein transport]
GO:0006897 [endocytosis]
GO:0006900 [vesicle budding from membrane]
GO:0008289 [lipid binding]
GO:0009898 [cytoplasmic side of plasma membrane]
GO:0012505 [endomembrane system]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030119 [AP-type membrane coat adaptor complex]
GO:0030122 [AP-2 adaptor complex]
GO:0030131 [clathrin adaptor complex]
GO:0030666 [endocytic vesicle membrane]
GO:0030669 [clathrin-coated endocytic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0031623 [receptor internalization]
GO:0035615 [clathrin adaptor activity]
GO:0036020 [endolysosome membrane]
GO:0044325 [transmembrane transporter binding]
GO:0045334 [clathrin-coated endocytic vesicle]
GO:0048488 [synaptic vesicle endocytosis]
GO:0050750 [low-density lipoprotein particle receptor binding]
GO:0051649 [establishment of localization in cell]
GO:0065003 [protein-containing complex assembly]
GO:0070062 [extracellular exosome]
GO:0072583 [clathrin-dependent endocytosis]
GO:0097494 [regulation of vesicle size]
GO:0098794 [postsynapse]
GO:0098884 [postsynaptic neurotransmitter receptor internalization]
GO:1903077 [negative regulation of protein localization to plasma membrane]
Show all
433 aa
49.4 kDa
No 0
AP2M1-226
ENSP00000509466
ENST00000686364
A0A8I5KWD3
[Direct mapping] AP-2 complex subunit mu
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006886 [intracellular protein transport]
GO:0006897 [endocytosis]
GO:0008289 [lipid binding]
GO:0012505 [endomembrane system]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030119 [AP-type membrane coat adaptor complex]
GO:0030131 [clathrin adaptor complex]
GO:0031410 [cytoplasmic vesicle]
GO:0051649 [establishment of localization in cell]
Show all
364 aa
41.6 kDa
No 0

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