We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL26
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPL26
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:1031.8 nTPM
FANTOM5:82.8 Scaled Tags Per Million
Pig:204.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030449Antibody CAB037301
Glial cells Not detectedMedium
Neuronal cells MediumHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1031.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1031.8
Samples: 246

Max nTPM: 2679.9
Min nTPM: 553.5
Std nTPM: 312.1
Median nTPM: 970.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2679.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 2475.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2273.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2179.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2023.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1984.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1762.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1730.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1711.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1701.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1695.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1685.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1668.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1607.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1598.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1585.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1561.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1532.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1455.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1436.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1424.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1415.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1411.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1400.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1396.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1363.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1350.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1335.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1327.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1320.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1307.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1295.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1289.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1272.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1268.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1267.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1266.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1260.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1252.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1249.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1246.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1246.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1243.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1240.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1238.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1235.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1234.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1234.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1223.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1222.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1217.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1213.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1210.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1200.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1197.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1188.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1179.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1178.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1170.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1168.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1166.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1165.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1157.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1156.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1156.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1154.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1152.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1117.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1113.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1104.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1101.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1094.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1089.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1086.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1075.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1074.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1074.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1073.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1068.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1066.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1065.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1058.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1057.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1055.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1053.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1053.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1051.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1049.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1048.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1048.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1047.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1045.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1040.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1031.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1030.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1027.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1025.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1022.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1015.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1015.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1015.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1014.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1012.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1005.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1004.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1004.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 1001.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 997.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 996.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 994.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 991.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 990.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 990.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 989.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 984.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 982.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 982.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 977.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 975.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 975.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 974.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 972.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 972.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 969.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 967.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 961.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 960.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 960.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 959.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 959.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 958.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 957.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 953.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 952.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 951.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 945.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 945.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 943.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 938.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 938.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 927.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 927.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 926.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 915.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 908.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 908.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 905.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 903.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 901.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 900.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 899.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 898.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 897.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 896.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 892.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 891.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 889.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 884.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 883.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 882.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 882.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 881.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 880.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 880.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 878.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 877.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 876.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 873.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 873.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 870.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 862.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 861.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 860.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 855.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 854.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 851.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 851.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 849.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 837.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 835.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 835.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 833.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 832.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 832.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 825.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 824.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 824.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 821.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 821.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 820.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 818.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 817.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 812.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 806.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 802.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 801.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 801.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 798.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 797.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 796.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 792.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 791.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 791.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 789.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 789.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 784.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 783.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 777.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 775.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 774.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 774.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 773.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 772.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 764.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 752.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 748.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 748.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 747.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 743.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 741.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 741.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 731.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 731.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 728.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 726.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 724.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 721.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 713.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 704.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 703.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 696.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 692.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 686.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 679.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 675.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 675.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 672.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 669.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 653.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 648.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 645.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 592.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 588.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 583.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 567.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 553.5
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

82.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 82.8
FF:10164-103B2 76 years, female 82.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

204.5
Pig sample Sample description nTPM
Caudate
nTPM: 204.5
Samples: 4

Max nTPM: 223.9
Min nTPM: 174.7
Sample A Female 209.4
Sample B Female 223.9
Sample C Male 210.1
Sample D Male 174.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org