HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:32.1 nTPM
HPA Brain:49.3 nTPM
GTEx:32.1 nTPM
FANTOM5:37.4 Scaled Tags Per Million
Pig:7.3 nTPM
Mouse:18.3 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041354
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 49.3
Sample id Sample description nTPM
Hippocampus
nTPM: 46.0
1898 Male, age 80, left hemisphere 50.9
2621 Female, age 67, right hemisphere 50.7
2148 Female, age 91, left hemisphere 49.5
1855 Male, age 76, left hemisphere 47.7
1911 Female, age 85, right hemisphere 38.8
2529 Female, age 94, left hemisphere 38.1
Dentate gyrus
nTPM: 49.3
2530 Female, age 94, left hemisphere 59.3
1927 Female, age 91, both hemispheres 55.1
2010 Male, age 76, both hemispheres 49.7
2531 Female, age 67, both hemispheres 44.7
2528 Male, age 74, both hemispheres 43.6
2246 Female, age 85, both hemispheres 43.1
Entorhinal gyrus
nTPM: 38.0
2613 Female, age 94, left hemisphere 42.3
2764 Male, age 80, right hemisphere 42.1
2117 Female, age 91, right hemisphere 37.3
1787 Male, age 76, left hemisphere 35.9
2686 Male, age 75, right hemisphere 35.5
1938 Female, age 85, left hemisphere 34.8
Hippocampus, CA1
nTPM: 46.2
2749 Male, age 80, left hemisphere 57.7
1873 Female, age 85, both hemispheres 46.2
2045 Male, age 76, both hemispheres 44.0
2082 Female, age 91, right hemisphere 41.7
2527 Male, age 74, both hemispheres 41.2
Hippocampus, CA2
nTPM: 44.6
1963 Male, age 80, left hemisphere 55.2
2437 Female, age 94, left hemisphere 48.1
1892 Male, age 76, both hemispheres 46.8
2249 Male, age 74, both hemispheres 40.0
1940 Female, age 85, left hemisphere 39.3
2113 Female, age 91, right hemisphere 38.1
Hippocampus, CA3
nTPM: 44.5
2620 Female, age 94, left hemisphere 58.7
2861 Female, age 67, both hemispheres 52.3
2137 Male, age 80, left hemisphere 42.8
2436 Male, age 74, both hemispheres 39.9
1867 Male, age 76, both hemispheres 37.5
1891 Female, age 85, both hemispheres 35.9
Parahippocampal cortex
nTPM: 36.8
2245 Female, age 91, both hemispheres 45.7
1990 Female, age 91, right hemisphere 37.5
2532 Female, age 72, left hemisphere 37.5
2622 Female, age 67, right hemisphere 37.5
2250 Female, age 67, right hemisphere 36.8
2693 Female, age 94, both hemispheres 36.1
2018 Male, age 76, both hemispheres 34.8
2692 Male, age 74, both hemispheres 34.7
1850 Male, age 80, both hemispheres 34.2
1933 Female, age 85, both hemispheres 33.6
Perirhinal gyrus
nTPM: 36.4
1847 Female, age 91, left hemisphere 42.4
1794 Male, age 80, right hemisphere 38.0
2521 Female, age 94, right hemisphere 36.6
1841 Female, age 85, right hemisphere 32.9
2848 Male, age 76, right hemisphere 32.0
Subiculum
nTPM: 38.6
2729 Female, age 91, right hemisphere 43.2
2438 Female, age 94, left hemisphere 40.9
2619 Male, age 74, both hemispheres 40.0
1901 Male, age 80, both hemispheres 37.3
1977 Female, age 85, both hemispheres 35.6
2042 Male, age 76, both hemispheres 34.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 32.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.1
Samples: 197

Max nTPM: 57.6
Min nTPM: 11.9
Std nTPM: 8.5
Median nTPM: 31.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 57.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 54.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 54.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 52.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 52.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 50.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 49.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 49.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 48.8
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 48.3
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 47.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 37.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.4
FF:10169-103B7 60 years, female 48.8
FF:10153-102I9 76 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 7.3
Pig sample Sample description nTPM
Subiculum
nTPM: 5.3
Samples: 4

Max nTPM: 6.8
Min nTPM: 4.3
Sample A Female 6.8
Sample B Female 4.6
Sample C Male 4.3
Sample D Male 5.3
Dorsal hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 9.5
Min nTPM: 6.0
Sample A Female 6.4
Sample B Female 6.0
Sample C Male 7.4
Sample D Male 9.5
Entorhinal cortex
nTPM: 7.1
Samples: 4

Max nTPM: 7.8
Min nTPM: 6.3
Sample A Female 7.3
Sample B Female 7.8
Sample C Male 6.3
Sample D Male 7.1
Ventral hippocampus
nTPM: 5.6
Samples: 4

Max nTPM: 5.8
Min nTPM: 5.3
Sample A Female 5.3
Sample B Female 5.5
Sample C Male 5.8
Sample D Male 5.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 18.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 20.5
Min nTPM: 15.3
Sample A Male 20.0
Sample B Male 20.5
Sample C Female 17.3
Sample D Female 15.3
Hippocampal formation
nTPM: 17.0
Samples: 4

Max nTPM: 21.7
Min nTPM: 12.4
Sample A Male 14.4
Sample B Male 12.4
Sample C Female 19.5
Sample D Female 21.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
68632008 Antisense, RP_050125_01_E07, Mouse strain C57BL/6J (56 days, male) 2.7

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