HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:52.1 nTPM
HPA Brain:124.5 nTPM
GTEx:52.1 nTPM
FANTOM5:190.0 Scaled Tags Per Million
Pig:176.7 nTPM
Mouse:226.0 nTPM
Allen mouse:11.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA072751
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 124.5
Sample id Sample description nTPM
Hippocampus
nTPM: 124.5
2529 Female, age 94, left hemisphere 147.6
1911 Female, age 85, right hemisphere 145.4
2148 Female, age 91, left hemisphere 143.4
1898 Male, age 80, left hemisphere 115.4
1855 Male, age 76, left hemisphere 105.2
2621 Female, age 67, right hemisphere 90.3
Dentate gyrus
nTPM: 99.2
2528 Male, age 74, both hemispheres 162.3
2246 Female, age 85, both hemispheres 111.3
1927 Female, age 91, both hemispheres 95.6
2530 Female, age 94, left hemisphere 87.1
2010 Male, age 76, both hemispheres 82.4
2531 Female, age 67, both hemispheres 56.6
Entorhinal gyrus
nTPM: 102.0
2117 Female, age 91, right hemisphere 179.4
1938 Female, age 85, left hemisphere 115.3
1787 Male, age 76, left hemisphere 92.2
2764 Male, age 80, right hemisphere 87.0
2686 Male, age 75, right hemisphere 74.3
2613 Female, age 94, left hemisphere 63.8
Hippocampus, CA1
nTPM: 107.7
2527 Male, age 74, both hemispheres 166.1
1873 Female, age 85, both hemispheres 135.8
2082 Female, age 91, right hemisphere 105.8
2749 Male, age 80, left hemisphere 69.4
2045 Male, age 76, both hemispheres 61.3
Hippocampus, CA2
nTPM: 104.9
2249 Male, age 74, both hemispheres 155.6
2113 Female, age 91, right hemisphere 131.3
1940 Female, age 85, left hemisphere 96.7
2437 Female, age 94, left hemisphere 96.1
1963 Male, age 80, left hemisphere 92.5
1892 Male, age 76, both hemispheres 57.4
Hippocampus, CA3
nTPM: 94.7
1891 Female, age 85, both hemispheres 130.4
2436 Male, age 74, both hemispheres 127.7
2620 Female, age 94, left hemisphere 87.6
2861 Female, age 67, both hemispheres 79.8
2137 Male, age 80, left hemisphere 75.5
1867 Male, age 76, both hemispheres 67.4
Parahippocampal cortex
nTPM: 95.4
2692 Male, age 74, both hemispheres 129.6
1933 Female, age 85, both hemispheres 111.9
2250 Female, age 67, right hemisphere 102.2
1990 Female, age 91, right hemisphere 102.1
2245 Female, age 91, both hemispheres 99.4
2622 Female, age 67, right hemisphere 96.0
1850 Male, age 80, both hemispheres 90.3
2693 Female, age 94, both hemispheres 80.7
2532 Female, age 72, left hemisphere 74.7
2018 Male, age 76, both hemispheres 67.1
Perirhinal gyrus
nTPM: 90.9
1794 Male, age 80, right hemisphere 108.8
1841 Female, age 85, right hemisphere 98.2
1847 Female, age 91, left hemisphere 96.1
2521 Female, age 94, right hemisphere 93.4
2848 Male, age 76, right hemisphere 58.0
Subiculum
nTPM: 118.6
2619 Male, age 74, both hemispheres 170.0
2729 Female, age 91, right hemisphere 165.1
1977 Female, age 85, both hemispheres 103.6
2438 Female, age 94, left hemisphere 95.9
1901 Male, age 80, both hemispheres 89.5
2042 Male, age 76, both hemispheres 87.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 52.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.1
Samples: 197

Max nTPM: 141.2
Min nTPM: 11.6
Std nTPM: 24.8
Median nTPM: 46.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 141.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 130.7
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 127.4
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 119.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 115.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 115.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 114.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 111.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 109.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 104.1
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 102.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 190.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 190.0
FF:10153-102I9 76 years, female 289.8
FF:10169-103B7 60 years, female 90.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 176.7
Pig sample Sample description nTPM
Subiculum
nTPM: 176.7
Samples: 4

Max nTPM: 219.0
Min nTPM: 151.1
Sample A Female 219.0
Sample B Female 176.7
Sample C Male 159.8
Sample D Male 151.1
Dorsal hippocampus
nTPM: 119.9
Samples: 4

Max nTPM: 130.6
Min nTPM: 106.0
Sample A Female 122.2
Sample B Female 106.0
Sample C Male 130.6
Sample D Male 120.8
Entorhinal cortex
nTPM: 148.0
Samples: 4

Max nTPM: 171.2
Min nTPM: 130.1
Sample A Female 140.6
Sample B Female 150.2
Sample C Male 171.2
Sample D Male 130.1
Ventral hippocampus
nTPM: 137.5
Samples: 4

Max nTPM: 177.2
Min nTPM: 117.4
Sample A Female 122.9
Sample B Female 132.4
Sample C Male 177.2
Sample D Male 117.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 226.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 226.0
Samples: 4

Max nTPM: 248.5
Min nTPM: 206.1
Sample A Male 248.5
Sample B Male 206.1
Sample C Female 224.2
Sample D Female 225.2
Hippocampal formation
nTPM: 200.3
Samples: 4

Max nTPM: 231.0
Min nTPM: 169.4
Sample A Male 231.0
Sample B Male 199.1
Sample C Female 169.4
Sample D Female 201.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.6
392933 Antisense, RP_040804_02_A04, Mouse strain C57BL/6J (56 days, male) 13.8
75749384 Antisense, RP_060518_01_B05, Mouse strain C57BL/6J (56 days, male) 9.4

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