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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Low
Hepatocytes: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:315.8 nTPM
HPA:138.3 nTPM
GTEx:315.8 nTPM
FANTOM5:186.7 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA010844
Cholangiocytes Low
Hepatocytes High



LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

138.3
N/A
Female, age 60
Liver sample 21
nTPM: 192.1
overview
Male, age 54
Liver sample 23
nTPM: 179.4
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 176
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 66.8
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 85.8
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 134.5
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 99.1
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 192.1
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 138.7
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 118.3
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

315.8
GTEx sample id Sample description nTPM
Liver
Average nTPM: 315.8
Samples: 226

Max nTPM: 615.7
Min nTPM: 61.6
Std nTPM: 84.5
Median nTPM: 309.9
GTEX-REY6-1226-SM-48FDR 60-69 years, male 615.7
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 608.0
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 571.4
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 554.7
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 525.9
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 519.2
GTEX-11ZUS-2526-SM-59872 30-39 years, male 510.1
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 506.7
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 505.4
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 495.5
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 492.1
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 486.3
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 477.5
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 477.2
GTEX-14PJO-1726-SM-68719 60-69 years, male 447.2
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 445.8
GTEX-13113-1326-SM-5GCOI 60-69 years, female 443.3
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 437.9
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 432.1
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 431.0
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 426.7
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 423.3
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 420.2
GTEX-YECK-1926-SM-4W21H 60-69 years, male 419.8
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 413.8
GTEX-RU72-1426-SM-46MUF 50-59 years, female 411.2
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 411.2
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 408.1
GTEX-13112-1426-SM-5EGH8 50-59 years, male 407.2
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 402.2
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 400.2
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 399.3
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 395.4
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 389.0
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 384.1
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 382.6
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 382.3
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 381.5
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 381.2
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 378.6
GTEX-18465-1626-SM-7LG6N 50-59 years, male 376.7
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 371.1
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 369.7
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 368.9
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 367.7
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 367.4
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 366.7
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 366.3
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 365.3
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 364.2
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 364.1
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 361.6
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 361.1
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 359.9
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 359.4
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 358.8
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 358.2
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 358.0
GTEX-12696-0826-SM-5EGGE 60-69 years, male 356.1
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 355.5
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 354.1
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 350.6
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 350.6
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 350.6
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 349.7
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 348.5
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 348.4
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 346.7
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 344.8
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 344.4
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 344.2
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 344.2
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 344.0
GTEX-14E7W-1526-SM-6871X 70-79 years, male 343.2
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 341.3
GTEX-1B932-1426-SM-793AN 40-49 years, female 340.7
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 338.8
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 337.3
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 335.4
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 334.9
GTEX-14JG1-1626-SM-664NH 40-49 years, male 334.2
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 332.5
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 332.3
GTEX-144GL-1426-SM-79OMA 50-59 years, male 331.7
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 331.3
GTEX-S33H-1626-SM-4AD68 30-39 years, male 331.2
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 330.3
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 328.9
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 327.7
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 326.7
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 325.3
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 325.1
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 324.8
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 324.7
GTEX-X261-1726-SM-4PQYT 50-59 years, male 323.9
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 323.6
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 323.0
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 322.0
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 321.7
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 321.1
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 320.5
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 320.5
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 319.9
GTEX-RN64-1826-SM-48FDV 50-59 years, male 318.8
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 318.2
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 318.2
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 317.3
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 316.3
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 314.1
GTEX-P78B-1326-SM-3P611 40-49 years, female 311.9
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 311.4
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 310.1
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 310.0
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 309.9
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 308.8
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 307.7
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 307.0
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 307.0
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 306.3
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 306.2
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 305.1
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 304.2
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 303.8
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 303.5
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 303.4
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 299.5
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 299.1
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 297.5
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 297.3
GTEX-18A7A-1526-SM-72D69 50-59 years, female 297.2
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 296.1
GTEX-Q734-0326-SM-48U15 40-49 years, female 293.6
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 292.8
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 291.9
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 291.5
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 290.5
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 289.7
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 289.7
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 288.9
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 287.9
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 285.9
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 284.7
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 283.8
GTEX-O5YV-0726-SM-EV798 60-69 years, female 283.8
GTEX-18A66-2026-SM-7189C 60-69 years, male 283.0
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 282.9
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 282.4
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 282.1
GTEX-R53T-0326-SM-48FEC 50-59 years, female 281.6
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 280.4
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 280.3
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 279.0
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 278.9
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 275.8
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 275.7
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 272.4
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 272.1
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 271.0
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 268.9
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 267.8
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 267.2
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 266.2
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 266.1
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 265.7
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 263.5
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 262.7
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 262.3
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 261.4
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 260.7
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 260.0
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 259.3
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 258.9
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 258.9
GTEX-11GSP-0626-SM-5986T 60-69 years, female 258.7
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 257.8
GTEX-1399T-0826-SM-5IFES 60-69 years, male 256.7
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 256.3
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 255.8
GTEX-QEL4-1226-SM-447A4 50-59 years, male 255.5
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 255.0
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 252.8
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 251.4
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 251.0
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 250.8
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 245.9
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 245.6
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 244.9
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 244.4
GTEX-QESD-2026-SM-447BI 20-29 years, male 241.9
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 240.8
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 239.0
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 236.2
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 230.2
GTEX-14XAO-0226-SM-68728 60-69 years, female 227.5
GTEX-1B933-1226-SM-731DW 50-59 years, female 227.4
GTEX-17F96-1226-SM-79OK2 70-79 years, male 226.9
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 226.5
GTEX-17HHE-0126-SM-79398 50-59 years, male 226.2
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 225.6
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 224.9
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 224.1
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 221.8
GTEX-S32W-1926-SM-4AD63 50-59 years, female 221.7
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 220.8
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 217.6
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 216.5
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 212.3
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 208.4
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 207.4
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 204.1
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 203.8
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 203.6
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 202.6
GTEX-14PHX-0526-SM-664NW 50-59 years, male 201.2
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 200.6
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 195.8
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 195.1
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 194.2
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 181.2
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 175.6
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 167.0
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 164.9
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 146.2
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 145.3
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 131.1
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 61.6
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

186.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 186.7
FF:10018-101C9 64,69,70 years, mixed 186.7

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