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SCNN1D
HPA
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PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SCNN1D
Synonyms dNaCh, ENaCdelta
Gene descriptioni

Full gene name according to HGNC.

Sodium channel epithelial 1 subunit delta
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

FDA approved drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband p36.33
Chromosome location (bp) 1280436 - 1292029
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000162572 (version 109)
Entrez gene 6339
HGNC HGNC:10601
UniProt P51172 (UniProt - Evidence at protein level)
neXtProt NX_P51172
GeneCards SCNN1D
Antibodypedia SCNN1D antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Sodium permeable non-voltage-sensitive ion channel inhibited by the diuretic amiloride. Mediates the electrodiffusion of the luminal sodium (and water, which follows osmotically) through the apical membrane of epithelial cells. Controls the reabsorption of sodium in kidney, colon, lung and sweat glands. Also plays a role in taste perception.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ion channel, Sodium channel
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Ion transport, Sensory transduction, Sodium transport, Taste, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Sodium
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable ligand-gated sodium channel activity. Predicted to be involved in sodium ion transmembrane transport. Located in actin cytoskeleton and plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SCNN1D-201
ENSP00000321594
ENST00000325425
P51172
[Direct mapping] Amiloride-sensitive sodium channel subunit delta
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005272 [sodium channel activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0006883 [cellular sodium ion homeostasis]
GO:0008217 [regulation of blood pressure]
GO:0015280 [ligand-gated sodium channel activity]
GO:0015629 [actin cytoskeleton]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0034706 [sodium channel complex]
GO:0035725 [sodium ion transmembrane transport]
GO:0036254 [cellular response to amiloride]
GO:0050896 [response to stimulus]
GO:0050909 [sensory perception of taste]
GO:0050914 [sensory perception of salty taste]
GO:0050915 [sensory perception of sour taste]
GO:0071468 [cellular response to acidic pH]
GO:0098662 [inorganic cation transmembrane transport]
GO:0098719 [sodium ion import across plasma membrane]
GO:1904045 [cellular response to aldosterone]
GO:1904117 [cellular response to vasopressin]
Show all
704 aa
77.4 kDa
No 2
SCNN1D-202
ENSP00000339504
ENST00000338555
P51172
[Direct mapping] Amiloride-sensitive sodium channel subunit delta
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005272 [sodium channel activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0006883 [cellular sodium ion homeostasis]
GO:0008217 [regulation of blood pressure]
GO:0015280 [ligand-gated sodium channel activity]
GO:0015629 [actin cytoskeleton]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0034706 [sodium channel complex]
GO:0035725 [sodium ion transmembrane transport]
GO:0036254 [cellular response to amiloride]
GO:0050896 [response to stimulus]
GO:0050909 [sensory perception of taste]
GO:0050914 [sensory perception of salty taste]
GO:0050915 [sensory perception of sour taste]
GO:0071468 [cellular response to acidic pH]
GO:0098662 [inorganic cation transmembrane transport]
GO:0098719 [sodium ion import across plasma membrane]
GO:1904045 [cellular response to aldosterone]
GO:1904117 [cellular response to vasopressin]
Show all
638 aa
70.2 kDa
No 2
SCNN1D-203
ENSP00000368393
ENST00000379099
H0Y3F1
[Direct mapping] Amiloride-sensitive sodium channel subunit delta
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005272 [sodium channel activity]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0016020 [membrane]
GO:0035725 [sodium ion transmembrane transport]
GO:0098662 [inorganic cation transmembrane transport]
Show all
308 aa
32.8 kDa
No 0
SCNN1D-205
ENSP00000368411
ENST00000379116
P51172
[Direct mapping] Amiloride-sensitive sodium channel subunit delta
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005272 [sodium channel activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0006883 [cellular sodium ion homeostasis]
GO:0008217 [regulation of blood pressure]
GO:0015280 [ligand-gated sodium channel activity]
GO:0015629 [actin cytoskeleton]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0034706 [sodium channel complex]
GO:0035725 [sodium ion transmembrane transport]
GO:0036254 [cellular response to amiloride]
GO:0050896 [response to stimulus]
GO:0050909 [sensory perception of taste]
GO:0050914 [sensory perception of salty taste]
GO:0050915 [sensory perception of sour taste]
GO:0071468 [cellular response to acidic pH]
GO:0098662 [inorganic cation transmembrane transport]
GO:0098719 [sodium ion import across plasma membrane]
GO:1904045 [cellular response to aldosterone]
GO:1904117 [cellular response to vasopressin]
Show all
802 aa
87.8 kDa
No 2
SCNN1D-206
ENSP00000383717
ENST00000400928
P51172
[Direct mapping] Amiloride-sensitive sodium channel subunit delta
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005272 [sodium channel activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0006883 [cellular sodium ion homeostasis]
GO:0008217 [regulation of blood pressure]
GO:0015280 [ligand-gated sodium channel activity]
GO:0015629 [actin cytoskeleton]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0034706 [sodium channel complex]
GO:0035725 [sodium ion transmembrane transport]
GO:0036254 [cellular response to amiloride]
GO:0050896 [response to stimulus]
GO:0050909 [sensory perception of taste]
GO:0050914 [sensory perception of salty taste]
GO:0050915 [sensory perception of sour taste]
GO:0071468 [cellular response to acidic pH]
GO:0098662 [inorganic cation transmembrane transport]
GO:0098719 [sodium ion import across plasma membrane]
GO:1904045 [cellular response to aldosterone]
GO:1904117 [cellular response to vasopressin]
Show all
638 aa
70.2 kDa
No 2
SCNN1D-208
ENSP00000420548
ENST00000470022
C9JDY8
[Direct mapping] Amiloride-sensitive sodium channel subunit delta
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Show all
GO:0005272 [sodium channel activity]
GO:0006814 [sodium ion transport]
GO:0016020 [membrane]
GO:0035725 [sodium ion transmembrane transport]
Show all
139 aa
14.7 kDa
No 1

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