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HENMT1
HPA
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  • HENMT1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

HENMT1
Synonyms C1orf59, FLJ30525, HEN1
Gene descriptioni

Full gene name according to HGNC.

HEN methyltransferase 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband p13.3
Chromosome location (bp) 108648290 - 108661526
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000162639 (version 109)
Entrez gene 113802
HGNC HGNC:26400
UniProt Q5T8I9 (UniProt - Evidence at protein level)
neXtProt NX_Q5T8I9
GeneCards HENMT1
Antibodypedia HENMT1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Methyltransferase that adds a 2'-O-methyl group at the 3'-end of piRNAs, a class of 24 to 30 nucleotide RNAs that are generated by a Dicer-independent mechanism and are primarily derived from transposons and other repeated sequence elements. This probably protects the 3'-end of piRNAs from uridylation activity and subsequent degradation. Stabilization of piRNAs is essential for gametogenesis.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Methyltransferase, RNA-binding, Transferase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

RNA-mediated gene silencing
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Magnesium, Metal-binding, S-adenosyl-L-methionine
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables small RNA 2'-O-methyltransferase. Involved in RNA methylation. Predicted to be located in P granule. Predicted to be active in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
HENMT1-201
ENSP00000359048
ENST00000370031
A0A0A0MRN1
[Direct mapping] Small RNA 2'-O-methyltransferase
Show all
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001510 [RNA methylation]
GO:0008168 [methyltransferase activity]
GO:0008171 [O-methyltransferase activity]
GO:0008173 [RNA methyltransferase activity]
GO:0016740 [transferase activity]
GO:0032259 [methylation]
Show all
424 aa
48.2 kDa
No 0
HENMT1-202
ENSP00000359049
ENST00000370032
Q5T8I9
[Direct mapping] Small RNA 2'-O-methyltransferase
Show all
Enzymes
   ENZYME proteins
   Transferases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001510 [RNA methylation]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0008168 [methyltransferase activity]
GO:0008171 [O-methyltransferase activity]
GO:0008173 [RNA methyltransferase activity]
GO:0016740 [transferase activity]
GO:0030422 [siRNA processing]
GO:0031047 [gene silencing by RNA]
GO:0032259 [methylation]
GO:0034587 [piRNA processing]
GO:0043186 [P granule]
GO:0046872 [metal ion binding]
GO:0090486 [small RNA 2'-O-methyltransferase activity]
Show all
393 aa
44.5 kDa
No 0
HENMT1-203
ENSP00000385655
ENST00000402983
Q5T8I9
[Direct mapping] Small RNA 2'-O-methyltransferase
Show all
Enzymes
   ENZYME proteins
   Transferases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001510 [RNA methylation]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0008168 [methyltransferase activity]
GO:0008171 [O-methyltransferase activity]
GO:0008173 [RNA methyltransferase activity]
GO:0016740 [transferase activity]
GO:0030422 [siRNA processing]
GO:0031047 [gene silencing by RNA]
GO:0032259 [methylation]
GO:0034587 [piRNA processing]
GO:0043186 [P granule]
GO:0046872 [metal ion binding]
GO:0090486 [small RNA 2'-O-methyltransferase activity]
Show all
393 aa
44.5 kDa
No 0
HENMT1-204
ENSP00000403953
ENST00000420055
X6RGV9
[Direct mapping] Small RNA 2'-O-methyltransferase
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001510 [RNA methylation]
GO:0008168 [methyltransferase activity]
GO:0008171 [O-methyltransferase activity]
GO:0008173 [RNA methyltransferase activity]
GO:0016740 [transferase activity]
GO:0032259 [methylation]
Show all
316 aa
35.8 kDa
No 0
HENMT1-207
ENSP00000499017
ENST00000651461
Q5T8I9
[Direct mapping] Small RNA 2'-O-methyltransferase
Show all
Enzymes
   ENZYME proteins
   Transferases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001510 [RNA methylation]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0008168 [methyltransferase activity]
GO:0008171 [O-methyltransferase activity]
GO:0008173 [RNA methyltransferase activity]
GO:0016740 [transferase activity]
GO:0030422 [siRNA processing]
GO:0031047 [gene silencing by RNA]
GO:0032259 [methylation]
GO:0034587 [piRNA processing]
GO:0043186 [P granule]
GO:0046872 [metal ion binding]
GO:0090486 [small RNA 2'-O-methyltransferase activity]
Show all
393 aa
44.5 kDa
No 0

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