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KCNT2
HPA
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  • KCNT2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

KCNT2
Synonyms KCa4.2, SLICK, SLO2.1
Gene descriptioni

Full gene name according to HGNC.

Potassium sodium-activated channel subfamily T member 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Potential drug targets
Transporters
Voltage-gated ion channels
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband q31.3
Chromosome location (bp) 196225779 - 196609225
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000162687 (version 109)
Entrez gene 343450
HGNC HGNC:18866
UniProt Q6UVM3 (UniProt - Evidence at protein level)
neXtProt NX_Q6UVM3
GeneCards KCNT2
Antibodypedia KCNT2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Sodium-activated and chloride-activated potassium channel 1, 2, 3, 4, 5, 6. Produces rapidly activating outward rectifier K(+) currents 7. Contributes to regulate neuronal excitability 8.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ion channel, Potassium channel
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Ion transport, Potassium transport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Potassium
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables chloride-activated potassium channel activity. Involved in potassium ion export across plasma membrane. Located in plasma membrane. Implicated in developmental and epileptic encephalopathy 57. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
KCNT2-201
ENSP00000294725
ENST00000294725
Q6UVM3
[Direct mapping] Potassium channel subfamily T member 2
Show all
A9LNM6
[Target identity:100%; Query identity:100%] Sodium activated potassium channel
Show all
Transporters
   Transporter channels and pores
Voltage-gated ion channels
   Calcium-Activated Potassium Channels
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Epilepsy
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0005228 [intracellular sodium activated potassium channel activity]
GO:0005267 [potassium channel activity]
GO:0005524 [ATP binding]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006813 [potassium ion transport]
GO:0015271 [outward rectifier potassium channel activity]
GO:0016020 [membrane]
GO:0022839 [ion gated channel activity]
GO:0070089 [chloride-activated potassium channel activity]
GO:0071805 [potassium ion transmembrane transport]
GO:0097623 [potassium ion export across plasma membrane]
Show all
1135 aa
130.5 kDa
No 7
KCNT2-202
ENSP00000356403
ENST00000367433
Q6UVM3
[Direct mapping] Potassium channel subfamily T member 2
Show all
Transporters
   Transporter channels and pores
Voltage-gated ion channels
   Calcium-Activated Potassium Channels
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Epilepsy
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0005228 [intracellular sodium activated potassium channel activity]
GO:0005267 [potassium channel activity]
GO:0005524 [ATP binding]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006813 [potassium ion transport]
GO:0015271 [outward rectifier potassium channel activity]
GO:0016020 [membrane]
GO:0022839 [ion gated channel activity]
GO:0070089 [chloride-activated potassium channel activity]
GO:0071805 [potassium ion transmembrane transport]
GO:0097623 [potassium ion export across plasma membrane]
Show all
1111 aa
127.7 kDa
No 7
KCNT2-203
ENSP00000405474
ENST00000451324
Q3SY61
[Direct mapping] KCNT2 protein; Potassium channel subfamily T member 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Epilepsy
Show all
GO:0005267 [potassium channel activity]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006813 [potassium ion transport]
GO:0016020 [membrane]
GO:0071805 [potassium ion transmembrane transport]
Show all
370 aa
41.9 kDa
No 0
KCNT2-206
ENSP00000476657
ENST00000609185
Q6UVM3
[Direct mapping] Potassium channel subfamily T member 2
Show all
Transporters
   Transporter channels and pores
Voltage-gated ion channels
   Calcium-Activated Potassium Channels
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Epilepsy
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0005228 [intracellular sodium activated potassium channel activity]
GO:0005267 [potassium channel activity]
GO:0005524 [ATP binding]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0006813 [potassium ion transport]
GO:0015271 [outward rectifier potassium channel activity]
GO:0016020 [membrane]
GO:0022839 [ion gated channel activity]
GO:0070089 [chloride-activated potassium channel activity]
GO:0071805 [potassium ion transmembrane transport]
GO:0097623 [potassium ion export across plasma membrane]
Show all
1068 aa
122.6 kDa
No 7
KCNT2-209
ENSP00000501240
ENST00000673703
A0A669KBD9
[Direct mapping] Potassium channel subfamily T member 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Epilepsy
Show all
54 aa
6.4 kDa
No 0

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