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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:130.6 nTPM
HPA Brain:254.0 nTPM
GTEx:130.6 nTPM
FANTOM5:390.8 Scaled Tags Per Million
Pig:137.0 nTPM
Mouse:168.0 nTPM
Allen mouse:12.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002981Antibody CAB025746
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

254.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 174.7
1781 Male, age 74, unknown 236.1
1857 Female, age 85, left hemisphere 206.4
1854 Male, age 80, left hemisphere 189.9
2846 Female, age 79, unknown 189.2
2290 Female, age 72, unknown 180.7
2289 Male, age 61, right hemisphere 165.5
2288 Male, age 75, left hemisphere 116.1
2481 Female, age 94, left hemisphere 114.0
Globus pallidus, externus
nTPM: 83.3
2395 Male, age 75, both hemispheres 108.8
2772 Female, age 79, unknown 100.7
2646 Male, age 61, right hemisphere 89.0
2567 Female, age 72, unknown 59.4
1996 Male, age 80, right hemisphere 58.5
Globus pallidus, internus
nTPM: 78.1
2287 Male, age 75, right hemisphere 123.7
2483 Female, age 94, right hemisphere 110.9
1818 Male, age 74, unknown 91.9
2566 Female, age 72, unknown 68.5
2037 Male, age 80, right hemisphere 66.9
2778 Female, age 91, both hemispheres 50.2
2111 Female, age 85, right hemisphere 34.6
Nucleus accumbens
nTPM: 202.8
1856 Female, age 91, right hemisphere 345.9
1783 Male, age 74, unknown 290.5
2824 Male, age 61, right hemisphere 254.8
1806 Female, age 85, left hemisphere 212.5
2698 Female, age 72, unknown 197.7
2286 Male, age 75, left hemisphere 126.0
2732 Male, age 80, right hemisphere 106.7
2391 Female, age 94, left hemisphere 88.1
Nucleus basalis of Meynert
nTPM: 142.8
2484 Female, age 94, left hemisphere 167.8
2393 Male, age 80, right hemisphere 153.5
2821 Male, age 75, both hemispheres 135.7
2569 Male, age 61, both hemispheres 114.1
Nucleus of the diagonal band
nTPM: 254.0
1812 Female, age 91, both hemispheres 326.6
2775 Male, age 80, right hemisphere 286.0
2195 Female, age 85, both hemispheres 260.6
2029 Male, age 61, right hemisphere 258.2
1979 Male, age 74, unknown 138.8
Putamen
nTPM: 161.3
1937 Female, age 91, right hemisphere 233.0
1838 Male, age 80, right hemisphere 221.5
2466 Female, age 79, unknown 157.6
1829 Male, age 74, unknown 145.3
2482 Female, age 94, left hemisphere 135.3
2647 Male, age 75, left hemisphere 133.5
2489 Female, age 72, unknown 103.0
Septal nuclei
nTPM: 215.0
2031 Female, age 72, unknown 289.2
1960 Male, age 74, unknown 277.4
2629 Female, age 94, right hemisphere 270.4
2009 Female, age 91, both hemispheres 248.6
2059 Female, age 85, both hemispheres 178.7
2394 Male, age 61, left hemisphere 138.4
2199 Male, age 80, right hemisphere 102.5
Stria terminalis, bed nucleus
nTPM: 234.5
1974 Female, age 91, both hemispheres 282.0
2486 Female, age 94, both hemispheres 249.8
2201 Male, age 74, unknown 171.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 80.4
Samples: 246

Max nTPM: 178.9
Min nTPM: 22.0
Std nTPM: 34.0
Median nTPM: 78.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 178.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 172.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 171.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 167.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 167.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 164.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 156.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 155.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 153.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 148.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 143.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 142.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 139.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 139.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 137.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 137.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 137.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 136.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 134.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 134.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 129.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 126.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 125.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 124.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 124.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 122.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 122.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 121.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 121.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 120.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 120.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 120.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 119.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 119.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 119.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 118.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 116.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 116.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 115.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 114.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 113.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 113.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 113.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 112.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 112.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 111.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 110.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 110.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 109.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 108.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 108.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 108.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 108.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 108.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 108.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 108.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 108.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 107.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 106.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 105.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 105.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 104.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 103.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 101.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 100.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 100.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 98.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 98.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 97.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 97.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 97.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 97.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 97.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 97.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 96.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 96.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 96.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 95.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 95.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 95.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 93.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 92.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 91.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 91.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 90.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 90.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 89.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 89.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 89.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 89.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 88.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 88.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 88.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 88.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 87.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 86.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 86.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 86.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 86.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 86.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 85.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 84.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 84.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 83.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 83.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 83.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 82.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 82.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 82.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 81.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 81.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 81.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 81.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 81.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 81.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 81.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 81.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 80.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 80.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 80.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 79.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 79.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 78.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 78.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 78.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 78.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 78.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 77.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 77.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 76.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 76.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 76.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 75.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 75.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 74.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 74.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 73.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 73.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 73.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 73.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 73.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 73.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 72.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 72.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 71.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 70.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 70.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 70.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 69.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 69.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 69.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 68.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 68.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 67.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 66.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 66.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 65.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 65.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 64.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 63.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 63.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 62.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 62.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 62.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 61.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 58.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 57.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 57.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 56.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 55.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 55.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 55.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 55.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 55.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 54.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 54.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 54.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 53.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 53.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 53.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 53.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 52.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 52.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 52.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 52.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 51.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 51.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 50.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 50.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 50.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 50.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 49.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 49.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 48.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 48.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 48.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 47.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 47.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 46.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 45.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 45.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 45.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 44.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 44.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 44.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 44.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 44.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 43.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 43.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 43.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 42.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 42.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 41.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 41.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 41.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 40.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 40.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 40.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 40.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 39.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 39.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 39.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 38.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 37.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 36.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 35.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 35.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 34.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 34.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 34.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 34.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 32.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 31.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 31.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 31.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 31.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 31.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 30.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 28.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 27.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 27.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 26.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 26.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 26.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 24.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 22.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 130.6
Samples: 246

Max nTPM: 263.6
Min nTPM: 12.7
Std nTPM: 53.4
Median nTPM: 130.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 263.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 259.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 247.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 246.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 244.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 238.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 234.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 231.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 230.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 225.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 224.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 222.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 220.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 217.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 216.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 216.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 210.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 207.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 207.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 207.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 207.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 206.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 206.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 200.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 199.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 199.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 198.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 197.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 195.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 195.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 194.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 192.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 192.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 190.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 190.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 189.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 188.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 186.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 186.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 185.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 185.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 185.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 185.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 184.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 182.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 182.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 181.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 181.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 179.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 176.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 175.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 175.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 175.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 175.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 174.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 173.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 173.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 172.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 172.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 171.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 170.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 168.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 167.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 166.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 165.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 165.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 165.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 164.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 164.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 163.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 163.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 163.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 162.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 162.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 162.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 162.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 161.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 161.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 161.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 159.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 159.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 158.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 158.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 157.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 156.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 154.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 153.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 153.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 153.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 152.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 152.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 151.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 151.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 150.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 148.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 147.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 146.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 145.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 145.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 144.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 144.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 144.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 144.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 143.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 142.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 142.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 142.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 141.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 141.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 141.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 140.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 139.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 138.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 136.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 135.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 134.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 134.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 134.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 134.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 134.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 132.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 132.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 130.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 129.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 127.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 127.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 126.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 126.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 125.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 125.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 125.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 123.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 123.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 121.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 121.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 121.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 120.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 120.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 120.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 119.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 119.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 118.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 118.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 118.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 118.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 116.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 115.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 114.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 114.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 114.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 114.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 113.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 113.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 113.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 111.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 109.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 108.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 108.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 108.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 107.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 107.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 105.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 104.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 104.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 104.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 104.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 104.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 103.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 103.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 103.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 102.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 100.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 99.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 98.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 98.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 98.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 95.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 94.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 94.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 94.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 92.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 91.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 89.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 89.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 88.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 87.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 85.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 85.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 81.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 80.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 79.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 78.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 78.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 77.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 74.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 74.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 74.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 74.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 74.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 73.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 72.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 72.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 71.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 70.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 70.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 70.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 69.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 69.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 69.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 68.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 68.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 67.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 66.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 65.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 64.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 63.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 63.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 62.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 61.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 61.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 58.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 57.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 56.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 55.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 54.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 54.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 54.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 53.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 53.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 52.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 52.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 52.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 51.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 48.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 48.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 46.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 46.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 42.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 41.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 40.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 38.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 38.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 36.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 26.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 26.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 12.7
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Brain - Putamen (basal ganglia)
Average nTPM: 74.0
Samples: 205

Max nTPM: 216.4
Min nTPM: 13.7
Std nTPM: 35.3
Median nTPM: 68.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 216.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 163.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 159.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 155.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 155.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 153.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 150.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 147.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 147.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 146.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 139.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 137.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 137.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 135.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 133.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 133.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 129.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 127.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 126.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 124.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 119.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 118.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 116.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 116.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 116.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 114.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 114.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 111.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 111.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 111.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 110.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 109.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 108.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 108.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 108.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 107.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 106.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 106.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 105.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 105.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 104.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 104.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 103.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 101.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 100.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 100.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 100.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 100.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 99.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 99.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 99.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 98.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 98.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 97.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 97.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 96.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 93.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 93.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 93.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 92.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 91.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 91.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 91.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 90.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 90.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 89.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 87.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 87.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 85.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 85.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 84.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 83.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 83.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 83.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 83.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 82.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 81.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 81.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 81.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 80.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 80.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 79.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 78.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 77.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 77.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 76.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 76.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 75.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 75.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 74.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 74.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 73.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 73.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 73.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 71.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 71.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 71.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 70.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 70.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 69.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 68.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 68.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 68.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 67.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 66.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 66.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 66.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 66.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 65.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 64.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 64.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 64.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 63.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 62.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 62.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 62.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 62.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 61.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 60.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 59.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 59.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 59.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 58.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 57.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 57.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 57.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 56.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 55.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 55.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 55.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 54.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 54.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 54.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 54.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 54.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 53.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 53.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 53.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 52.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 51.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 51.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 50.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 50.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 49.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 49.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 49.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 48.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 48.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 48.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 47.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 47.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 46.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 46.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 45.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 44.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 44.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 43.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 43.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 43.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 43.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 43.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 43.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 42.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 41.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 41.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 40.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 40.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 39.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 39.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 39.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 39.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 38.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 38.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 38.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 38.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 37.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 36.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 36.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 36.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 35.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 34.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 33.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 33.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 33.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 32.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 32.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 32.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 32.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 32.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 31.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 31.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 31.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 31.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 30.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 29.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 29.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 27.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 25.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 25.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 25.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 24.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 24.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 17.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 15.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 13.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

390.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 236.0
FF:10164-103B2 76 years, female 236.0
Nucleus accumbens
Scaled Tags Per Million: 390.8
FF:10037-101F1 23-56 years, mixed 390.8
Putamen
Scaled Tags Per Million: 334.3
FF:10176-103C5 60 years, female 334.3
Globus pallidus
Scaled Tags Per Million: 66.0
FF:10175-103C4 60 years, female 89.4
FF:10161-103A8 76 years, female 42.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

137.0
Pig sample Sample description nTPM
Caudate
nTPM: 137.0
Samples: 4

Max nTPM: 148.2
Min nTPM: 120.5
Sample A Female 120.5
Sample B Female 132.8
Sample C Male 146.5
Sample D Male 148.2
Putamen
nTPM: 105.1
Samples: 4

Max nTPM: 134.6
Min nTPM: 75.2
Sample A Female 75.2
Sample B Female 90.5
Sample C Male 120.1
Sample D Male 134.6
Septum
nTPM: 114.9
Samples: 4

Max nTPM: 146.8
Min nTPM: 82.9
Sample A Female 122.9
Sample B Female 106.9
Sample C Male 146.8
Sample D Male 82.9
Ventral pallidum
nTPM: 115.8
Samples: 4

Max nTPM: 148.7
Min nTPM: 77.7
Sample A Female 148.7
Sample B Female 77.7
Sample C Male 136.5
Sample D Male 100.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

168.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 146.5
Samples: 4

Max nTPM: 154.5
Min nTPM: 136.3
Sample A Male 148.2
Sample B Male 154.5
Sample C Female 136.3
Sample D Female 147.0
Septum
nTPM: 162.1
Samples: 4

Max nTPM: 176.0
Min nTPM: 150.7
Sample A Male 176.0
Sample B Male 162.6
Sample C Female 150.7
Sample D Female 159.0
Ventral forebrain
nTPM: 168.0
Samples: 4

Max nTPM: 178.4
Min nTPM: 159.2
Sample A Male 159.2
Sample B Male 178.4
Sample C Female 164.6
Sample D Female 169.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 12.3
69169911 Antisense, RP_050321_04_D11, Mouse strain C57BL/6J (56 days, male) 12.3
Pallidum
Expression energy: 10.2
69169911 Antisense, RP_050321_04_D11, Mouse strain C57BL/6J (56 days, male) 10.2

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