PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		91.072
Mouse brain, Intensity
Ponsi 		111.921
RNA expressioni
HPA Brain:292.3 nTPM
FANTOM5:299.4 Scaled Tags Per Million
Pig:149.1 nTPM
Mouse:100.5 nTPM
Allen mouse:12.2 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody CAB025746
Medulla oblongata mean intensity 91.072
intensityi
FRONT BACK
Nucleus of the solitary tract 14.181
Raphe magnus nucleus 30.441
Cochlear nucleus 68.692
Lateral paragigantocellular nucleus 47.823
Raphe pallidus nucleus 91.072
Facial nucleus 60.870
Hypoglossal nucleus 43.365
Ambiguus nucleus 74.427
External cuneate nucleus 30.102
Inferior olivary nucleus 78.159
Raphe obscures nucleus 49.988
Dorsal motor nucleus of vagus 85.469
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 35.031
Parabrachial nucleus 39.852
Principle sensory trigeminal nucleus 47.547
Locus coeruleus 111.921
Pontine nucleus 38.594
Vestibular nucleus 13.649
Pontine reticular nucleus, oral 19.977
Lateral lemniscus 7.768
Superior paraolivary nucleus 49.355

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 292.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 103.7
1984 Male, age 76, both hemispheres 177.2
2301 Female, age 85, both hemispheres 94.2
2090 Male, age 80, both hemispheres 78.2
2188 Female, age 91, both hemispheres 65.0
Area postrema
nTPM: 169.5
2799 Male, age 61, both hemispheres 253.7
2054 Male, age 76, both hemispheres 162.3
2306 Male, age 80, both hemispheres 92.4
Dorsal cochlear nucleus
nTPM: 107.4
2058 Male, age 76, both hemispheres 126.5
2370 Male, age 61, both hemispheres 113.6
2187 Female, age 91, both hemispheres 108.9
2802 Male, age 74, right hemisphere 100.7
2378 Male, age 80, both hemispheres 87.5
Dorsal medullary reticular nucleus
nTPM: 135.5
2040 Female, age 85, both hemispheres 184.2
2088 Male, age 76, both hemispheres 116.5
2373 Male, age 61, both hemispheres 105.9
Dorsal motor vagal complex
nTPM: 189.3
2133 Female, age 91, both hemispheres 281.4
2844 Male, age 55, unknown 221.3
2000 Male, age 74, unknown 217.1
2813 Female, age 72, unknown 210.4
2643 Male, age 74, both hemispheres 181.2
2797 Male, age 61, both hemispheres 175.3
2185 Male, age 76, both hemispheres 116.8
2807 Female, age 85, both hemispheres 111.3
Dorsal tegmental nucleus
nTPM: 118.9
2358 Male, age 61, both hemispheres 133.4
2083 Male, age 80, both hemispheres 129.1
1936 Male, age 76, left hemisphere 120.6
2326 Male, age 74, both hemispheres 92.6
Dorsolateral tegmental area
nTPM: 116.9
2141 Male, age 76, both hemispheres 144.0
2654 Male, age 80, both hemispheres 125.2
2360 Male, age 74, both hemispheres 121.9
2751 Female, age 85, both hemispheres 103.7
2337 Male, age 61, both hemispheres 89.7
Gigantocellular reticular nuclei, medullary
nTPM: 117.0
2462 Male, age 74, both hemispheres 176.9
2310 Male, age 80, both hemispheres 121.6
1876 Female, age 85, both hemispheres 121.5
2022 Male, age 76, right hemisphere 118.8
2387 Female, age 91, both hemispheres 93.2
2314 Male, age 61, both hemispheres 69.8
Gigantocellular reticular nuclei, pars
nTPM: 135.1
2168 Male, age 76, both hemispheres 187.1
2084 Female, age 85, both hemispheres 159.3
2336 Male, age 61, both hemispheres 133.3
2330 Male, age 80, both hemispheres 99.2
2706 Male, age 80, both hemispheres 96.5
Inferior olive
nTPM: 82.2
2628 Female, age 91, both hemispheres 112.0
2085 Female, age 85, both hemispheres 87.1
2563 Male, age 74, both hemispheres 74.0
2379 Male, age 80, both hemispheres 70.2
2178 Male, age 61, both hemispheres 67.4
Kolliker-Fuse nucleus
nTPM: 149.6
2163 Male, age 80, both hemispheres 265.9
2793 Female, age 91, left hemisphere 91.5
2315 Male, age 76, right hemisphere 91.4
Lateral lemniscal nuclei
nTPM: 140.6
2169 Male, age 76, both hemispheres 184.6
2036 Male, age 80, both hemispheres 154.7
2453 Male, age 74, right hemisphere 139.6
2746 Female, age 85, left hemisphere 132.5
2320 Female, age 91, left hemisphere 91.5
Lateral medullary reticular nucleus
nTPM: 106.5
2044 Male, age 76, both hemispheres 166.1
2804 Female, age 91, both hemispheres 117.4
2190 Female, age 85, both hemispheres 104.8
2374 Male, age 61, both hemispheres 97.4
2852 Male, age 80, both hemispheres 88.2
2305 Male, age 74, both hemispheres 65.4
Lateral parabrachial nucleus
nTPM: 119.1
2139 Female, age 85, right hemisphere 163.6
2790 Male, age 61, both hemispheres 148.5
2013 Male, age 80, both hemispheres 110.7
2792 Male, age 76, both hemispheres 53.8
Lateral vestibular nucleus
nTPM: 197.9
2184 Male, age 76, both hemispheres 273.0
2311 Male, age 80, both hemispheres 122.8
Locus coeruleus
nTPM: 292.3
2123 Female, age 91, both hemispheres 374.7
2720 Male, age 74, both hemispheres 345.5
1980 Male, age 76, both hemispheres 312.6
2014 Male, age 55, unknown 278.0
2317 Female, age 72, unknown 256.9
2162 Male, age 80, both hemispheres 240.4
2788 Male, age 74, unknown 238.0
Medial olivary nucleus
nTPM: 66.3
2851 Male, age 80, both hemispheres 90.1
2138 Female, age 91, both hemispheres 84.4
1943 Male, age 61, both hemispheres 52.6
1962 Male, age 76, both hemispheres 38.3
Medial parabrachial nucleus
nTPM: 133.8
2156 Male, age 61, both hemispheres 171.9
2786 Male, age 76, both hemispheres 129.7
2463 Female, age 85, right hemisphere 128.9
2854 Male, age 80, both hemispheres 127.7
2170 Female, age 91, both hemispheres 110.6
Medial periolivary nuclei
nTPM: 131.4
2063 Male, age 76, both hemispheres 190.8
2171 Female, age 85, both hemispheres 184.0
2791 Male, age 74, right hemisphere 115.0
2458 Female, age 91, both hemispheres 87.7
2081 Male, age 80, both hemispheres 79.8
Medial vestibular nucleus
nTPM: 180.4
2134 Male, age 76, both hemispheres 282.0
2624 Male, age 61, both hemispheres 214.3
2743 Female, age 85, both hemispheres 160.5
2801 Male, age 74, both hemispheres 154.7
2803 Female, age 91, both hemispheres 136.4
2093 Male, age 80, both hemispheres 134.5
Motor facial nucleus
nTPM: 142.9
2062 Male, age 76, both hemispheres 196.2
2327 Male, age 80, both hemispheres 149.3
2795 Female, age 91, both hemispheres 139.4
2365 Male, age 74, right hemisphere 133.1
2697 Female, age 85, both hemispheres 124.9
2126 Male, age 61, both hemispheres 114.3
Motor hypoglossal nucleus
nTPM: 190.8
2461 Male, age 61, both hemispheres 298.9
2132 Female, age 85, both hemispheres 176.5
2277 Male, age 76, both hemispheres 166.1
2125 Female, age 91, both hemispheres 162.6
2182 Male, age 80, both hemispheres 150.0
Motor trigeminal nucleus
nTPM: 114.2
2335 Male, age 61, both hemispheres 129.6
2309 Male, age 76, both hemispheres 128.0
2079 Male, age 80, both hemispheres 124.1
2560 Male, age 74, both hemispheres 101.8
2321 Female, age 91, both hemispheres 87.7
Nuclei of the trapezoid body
nTPM: 158.6
2159 Male, age 61, both hemispheres 199.6
2735 Female, age 85, both hemispheres 188.7
1983 Male, age 76, both hemispheres 174.3
2166 Male, age 80, both hemispheres 120.3
2368 Female, age 91, both hemispheres 110.1
Nucleus ambiguus
nTPM: 125.6
2096 Female, age 85, both hemispheres 198.8
2071 Male, age 76, both hemispheres 52.5
Nucleus cuneatus
nTPM: 113.8
2131 Male, age 76, both hemispheres 177.9
2562 Male, age 61, both hemispheres 150.4
2564 Male, age 74, both hemispheres 130.6
2100 Male, age 76, both hemispheres 115.6
2376 Male, age 61, both hemispheres 100.8
2808 Female, age 85, both hemispheres 93.2
2381 Male, age 80, both hemispheres 90.6
2805 Female, age 91, both hemispheres 88.1
2380 Male, age 80, both hemispheres 76.8
Nucleus gracilis
nTPM: 87.7
2627 Male, age 74, both hemispheres 123.1
2299 Female, age 85, both hemispheres 76.9
2382 Male, age 80, both hemispheres 63.1
Nucleus raphe magnus
nTPM: 159.2
2172 Female, age 85, both hemispheres 209.0
2160 Male, age 61, both hemispheres 200.4
2455 Male, age 74, both hemispheres 161.8
2051 Male, age 76, both hemispheres 153.2
2328 Male, age 80, both hemispheres 136.0
2459 Female, age 91, both hemispheres 94.5
Nucleus raphe obscurus
nTPM: 67.3
2800 Male, age 61, midline 92.6
2845 Female, age 85, midline 77.9
2142 Male, age 76, midline 31.4
Nucleus raphe pallidus
nTPM: 102.1
2183 Male, age 80, midline 168.4
1924 Male, age 61, midline 99.0
2145 Male, age 76, midline 39.0
Nucleus tractus solitarii
nTPM: 178.3
2191 Female, age 85, both hemispheres 181.4
2144 Female, age 91, right hemisphere 179.6
2656 Male, age 76, both hemispheres 176.8
2307 Male, age 80, both hemispheres 175.2
Paramedian reticular nucleus
nTPM: 148.9
2313 Male, age 61, both hemispheres 191.2
2057 Male, age 80, both hemispheres 159.6
2050 Female, age 85, both hemispheres 159.5
2052 Male, age 76, both hemispheres 85.2
Parvicellular reticular nuclei
nTPM: 126.7
2119 Male, age 80, both hemispheres 140.2
2558 Male, age 74, both hemispheres 131.7
2095 Male, age 76, both hemispheres 108.2
Parvicellular reticular nuclei, medullary
nTPM: 188.3
2091 Female, age 85, both hemispheres 208.5
2189 Female, age 91, both hemispheres 200.0
2181 Male, age 80, left hemisphere 156.2
Pedunculopontine tegmental nucleus
nTPM: 143.1
2334 Male, age 80, both hemispheres 173.3
1921 Female, age 85, both hemispheres 150.6
2338 Male, age 61, both hemispheres 105.5
Peritrigeminal nucleus
nTPM: 135.1
2179 Male, age 61, both hemispheres 145.4
2067 Female, age 85, both hemispheres 140.8
2136 Male, age 76, both hemispheres 119.1
Pontine nuclei
nTPM: 144.7
2787 Female, age 85, both hemispheres 222.5
1863 Male, age 55, unknown 209.6
2109 Female, age 72, unknown 166.3
1968 Male, age 76, left hemisphere 159.7
2727 Male, age 61, right hemisphere 154.9
2115 Male, age 80, left hemisphere 95.7
2454 Male, age 74, left hemisphere 83.9
2319 Female, age 91, both hemispheres 64.6
Pontine raphe nucleus
nTPM: 164.0
2122 Female, age 85, midline 164.7
2853 Male, age 76, midline 163.3
Posteroventral cochlear nucleus
nTPM: 90.0
2752 Female, age 85, both hemispheres 152.1
2070 Male, age 76, both hemispheres 124.7
2371 Male, age 61, both hemispheres 108.0
2341 Male, age 80, both hemispheres 48.4
2135 Female, age 91, both hemispheres 16.7
Prepositus hypoglossal nucleus
nTPM: 146.8
2855 Female, age 85, right hemisphere 157.7
2086 Male, age 80, both hemispheres 136.0
Principal sensory trigeminal nucleus
nTPM: 159.9
2324 Male, age 76, both hemispheres 233.4
2158 Male, age 61, both hemispheres 187.3
2008 Male, age 80, left hemisphere 137.5
2367 Female, age 91, left hemisphere 81.5
Reticular pontine nucleus, caudal
nTPM: 109.3
2332 Male, age 80, right hemisphere 150.7
2092 Male, age 76, both hemispheres 126.5
2457 Female, age 91, both hemispheres 85.6
2559 Male, age 74, both hemispheres 74.3
Reticular pontine nucleus, oral
nTPM: 114.8
2012 Female, age 85, both hemispheres 142.3
2167 Male, age 76, both hemispheres 132.0
1939 Male, age 80, both hemispheres 128.8
2361 Male, age 74, both hemispheres 97.8
2366 Female, age 91, both hemispheres 73.0
Reticulotegmental nucleus
nTPM: 131.6
2325 Male, age 76, both hemispheres 171.4
2322 Female, age 91, both hemispheres 121.4
2333 Male, age 80, both hemispheres 120.1
2452 Male, age 74, both hemispheres 113.7
Spinal trigeminal nucleus, caudal
nTPM: 178.7
2390 Female, age 91, both hemispheres 358.8
2447 Male, age 76, both hemispheres 157.4
2642 Male, age 74, both hemispheres 145.0
2308 Male, age 80, both hemispheres 126.2
2312 Male, age 61, both hemispheres 106.2
Spinal trigeminal nucleus, interpolar
nTPM: 218.8
2625 Male, age 61, both hemispheres 456.7
2066 Male, age 76, right hemisphere 186.8
2033 Male, age 80, both hemispheres 172.7
2389 Female, age 91, both hemispheres 143.5
2386 Female, age 85, both hemispheres 134.2
Spinal trigeminal nucleus, oral
nTPM: 191.1
2164 Male, age 80, both hemispheres 222.2
2737 Female, age 85, both hemispheres 205.2
1978 Male, age 76, both hemispheres 146.0
Spinal vestibular nucleus
nTPM: 128.1
2780 Male, age 80, both hemispheres 166.5
2186 Female, age 91, both hemispheres 153.6
2796 Male, age 61, both hemispheres 124.1
2806 Female, age 85, both hemispheres 120.3
2748 Male, age 76, both hemispheres 119.3
2384 Male, age 74, both hemispheres 84.9
Subcoeruleus area
nTPM: 134.9
2323 Female, age 91, left hemisphere 192.3
1958 Male, age 80, both hemispheres 142.8
2089 Male, age 76, left hemisphere 138.7
2451 Male, age 74, both hemispheres 123.6
2369 Female, age 85, left hemisphere 77.1
Superior olive
nTPM: 126.9
1875 Female, age 85, both hemispheres 169.8
2329 Male, age 80, right hemisphere 123.5
2020 Male, age 76, both hemispheres 119.6
2364 Male, age 74, right hemisphere 111.3
2561 Female, age 91, both hemispheres 110.3
Superior vestibular nucleus
nTPM: 135.3
2015 Male, age 80, both hemispheres 149.2
2383 Male, age 74, both hemispheres 129.1
2061 Male, age 76, both hemispheres 127.6
Ventral medullary reticular nucleus
nTPM: 114.7
2060 Male, age 76, both hemispheres 142.0
2372 Male, age 61, both hemispheres 87.3
Ventral periolivary nuclei
nTPM: 146.3
2130 Female, age 85, both hemispheres 196.8
2165 Male, age 80, both hemispheres 164.0
2794 Female, age 91, left hemisphere 121.6
2023 Male, age 76, both hemispheres 102.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 120.0
2741 Female, age 85, both hemispheres 154.0
1986 Male, age 76, both hemispheres 144.6
2302 Female, age 91, both hemispheres 116.8
2180 Male, age 61, both hemispheres 115.3
2118 Male, age 80, both hemispheres 69.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 128.3
2359 Male, age 61, both hemispheres 152.1
1959 Male, age 76, both hemispheres 140.9
2840 Female, age 85, both hemispheres 139.9
2449 Male, age 74, both hemispheres 138.2
2161 Male, age 80, both hemispheres 118.1
2456 Female, age 91, both hemispheres 80.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 299.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 143.4
FF:10182-103D2 60 years, female 174.7
FF:10165-103B3 76 years, female 112.2
Medulla oblongata
Scaled Tags Per Million: 111.8
FF:10038-101F2 18-64 years, mixed 202.3
FF:10155-103A2 76 years, female 77.8
FF:10174-103C3 60 years, female 55.3
Pons
Scaled Tags Per Million: 299.4
FF:10033-101E6 18-54 years, mixed 299.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 149.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 100.6
Samples: 4

Max nTPM: 126.7
Min nTPM: 46.9
Sample A Female 126.7
Sample B Female 113.4
Sample C Male 115.4
Sample D Male 46.9
Pons
nTPM: 149.1
Samples: 4

Max nTPM: 186.0
Min nTPM: 124.8
Sample A Female 186.0
Sample B Female 130.8
Sample C Male 154.7
Sample D Male 124.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 100.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 100.6
Samples: 4

Max nTPM: 110.1
Min nTPM: 90.7
Sample A Male 110.1
Sample B Male 95.4
Sample C Female 106.0
Sample D Female 90.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 12.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 12.2
69169911 Antisense, RP_050321_04_D11, Mouse strain C57BL/6J (56 days, male) 12.2
Pons
Expression energy: 10.3
69169911 Antisense, RP_050321_04_D11, Mouse strain C57BL/6J (56 days, male) 10.3

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