PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:974.6 nTPM
FANTOM5:1299.6 Scaled Tags Per Million
Pig:1389.0 nTPM
Mouse:620.6 nTPM
Allen mouse:10.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 974.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 712.8
2301 Female, age 85, both hemispheres 1093.5
2188 Female, age 91, both hemispheres 713.3
2090 Male, age 80, both hemispheres 616.8
1984 Male, age 76, both hemispheres 427.7
Area postrema
nTPM: 741.3
2799 Male, age 61, both hemispheres 1025.6
2306 Male, age 80, both hemispheres 650.1
2054 Male, age 76, both hemispheres 548.1
Dorsal cochlear nucleus
nTPM: 728.2
2187 Female, age 91, both hemispheres 937.6
2802 Male, age 74, right hemisphere 857.1
2378 Male, age 80, both hemispheres 658.7
2370 Male, age 61, both hemispheres 636.1
2058 Male, age 76, both hemispheres 551.4
Dorsal medullary reticular nucleus
nTPM: 584.4
2040 Female, age 85, both hemispheres 608.8
2373 Male, age 61, both hemispheres 589.0
2088 Male, age 76, both hemispheres 555.2
Dorsal motor vagal complex
nTPM: 628.3
2797 Male, age 61, both hemispheres 810.5
2813 Female, age 72, unknown 745.0
2844 Male, age 55, unknown 715.9
2643 Male, age 74, both hemispheres 653.5
2000 Male, age 74, unknown 574.2
2185 Male, age 76, both hemispheres 528.5
2133 Female, age 91, both hemispheres 510.7
2807 Female, age 85, both hemispheres 488.1
Dorsal tegmental nucleus
nTPM: 767.4
2358 Male, age 61, both hemispheres 909.1
2326 Male, age 74, both hemispheres 774.2
2083 Male, age 80, both hemispheres 729.8
1936 Male, age 76, left hemisphere 656.6
Dorsolateral tegmental area
nTPM: 713.0
2751 Female, age 85, both hemispheres 894.5
2654 Male, age 80, both hemispheres 785.9
2337 Male, age 61, both hemispheres 751.6
2141 Male, age 76, both hemispheres 573.8
2360 Male, age 74, both hemispheres 559.4
Gigantocellular reticular nuclei, medullary
nTPM: 603.2
2314 Male, age 61, both hemispheres 899.4
2387 Female, age 91, both hemispheres 715.4
1876 Female, age 85, both hemispheres 672.8
2310 Male, age 80, both hemispheres 548.7
2462 Male, age 74, both hemispheres 419.4
2022 Male, age 76, right hemisphere 363.4
Gigantocellular reticular nuclei, pars
nTPM: 531.2
2084 Female, age 85, both hemispheres 665.8
2336 Male, age 61, both hemispheres 582.0
2706 Male, age 80, both hemispheres 544.2
2330 Male, age 80, both hemispheres 511.6
2168 Male, age 76, both hemispheres 352.4
Inferior olive
nTPM: 792.7
2379 Male, age 80, both hemispheres 845.9
2628 Female, age 91, both hemispheres 812.5
2178 Male, age 61, both hemispheres 788.7
2563 Male, age 74, both hemispheres 771.4
2085 Female, age 85, both hemispheres 744.9
Kolliker-Fuse nucleus
nTPM: 679.8
2793 Female, age 91, left hemisphere 729.9
2315 Male, age 76, right hemisphere 688.3
2163 Male, age 80, both hemispheres 621.1
Lateral lemniscal nuclei
nTPM: 447.8
2320 Female, age 91, left hemisphere 500.3
2453 Male, age 74, right hemisphere 468.7
2746 Female, age 85, left hemisphere 459.7
2169 Male, age 76, both hemispheres 405.6
2036 Male, age 80, both hemispheres 404.8
Lateral medullary reticular nucleus
nTPM: 808.9
2305 Male, age 74, both hemispheres 938.7
2852 Male, age 80, both hemispheres 904.8
2804 Female, age 91, both hemispheres 878.0
2374 Male, age 61, both hemispheres 816.7
2190 Female, age 85, both hemispheres 719.4
2044 Male, age 76, both hemispheres 595.5
Lateral parabrachial nucleus
nTPM: 596.8
2792 Male, age 76, both hemispheres 834.3
2013 Male, age 80, both hemispheres 599.4
2790 Male, age 61, both hemispheres 544.7
2139 Female, age 85, right hemisphere 408.6
Lateral vestibular nucleus
nTPM: 764.7
2311 Male, age 80, both hemispheres 929.4
2184 Male, age 76, both hemispheres 600.0
Locus coeruleus
nTPM: 675.6
2720 Male, age 74, both hemispheres 812.0
2014 Male, age 55, unknown 683.0
1980 Male, age 76, both hemispheres 668.8
2788 Male, age 74, unknown 667.6
2317 Female, age 72, unknown 654.0
2162 Male, age 80, both hemispheres 632.3
2123 Female, age 91, both hemispheres 611.7
Medial olivary nucleus
nTPM: 870.8
1962 Male, age 76, both hemispheres 1124.1
1943 Male, age 61, both hemispheres 807.6
2851 Male, age 80, both hemispheres 777.6
2138 Female, age 91, both hemispheres 774.2
Medial parabrachial nucleus
nTPM: 783.6
2170 Female, age 91, both hemispheres 1238.8
2854 Male, age 80, both hemispheres 768.9
2463 Female, age 85, right hemisphere 732.7
2786 Male, age 76, both hemispheres 660.9
2156 Male, age 61, both hemispheres 516.8
Medial periolivary nuclei
nTPM: 484.4
2791 Male, age 74, right hemisphere 573.8
2458 Female, age 91, both hemispheres 563.9
2081 Male, age 80, both hemispheres 522.2
2063 Male, age 76, both hemispheres 423.6
2171 Female, age 85, both hemispheres 338.4
Medial vestibular nucleus
nTPM: 734.5
2801 Male, age 74, both hemispheres 1146.0
2624 Male, age 61, both hemispheres 819.4
2803 Female, age 91, both hemispheres 738.9
2743 Female, age 85, both hemispheres 601.7
2093 Male, age 80, both hemispheres 576.7
2134 Male, age 76, both hemispheres 524.2
Motor facial nucleus
nTPM: 508.1
2126 Male, age 61, both hemispheres 600.9
2697 Female, age 85, both hemispheres 578.8
2795 Female, age 91, both hemispheres 572.8
2365 Male, age 74, right hemisphere 571.3
2062 Male, age 76, both hemispheres 374.7
2327 Male, age 80, both hemispheres 349.9
Motor hypoglossal nucleus
nTPM: 679.0
2182 Male, age 80, both hemispheres 847.6
2125 Female, age 91, both hemispheres 746.8
2461 Male, age 61, both hemispheres 709.3
2132 Female, age 85, both hemispheres 579.7
2277 Male, age 76, both hemispheres 511.5
Motor trigeminal nucleus
nTPM: 588.3
2321 Female, age 91, both hemispheres 738.1
2309 Male, age 76, both hemispheres 634.9
2560 Male, age 74, both hemispheres 608.2
2335 Male, age 61, both hemispheres 574.5
2079 Male, age 80, both hemispheres 385.9
Nuclei of the trapezoid body
nTPM: 419.7
2166 Male, age 80, both hemispheres 516.3
2368 Female, age 91, both hemispheres 501.1
1983 Male, age 76, both hemispheres 392.7
2159 Male, age 61, both hemispheres 385.5
2735 Female, age 85, both hemispheres 303.1
Nucleus ambiguus
nTPM: 615.7
2071 Male, age 76, both hemispheres 876.8
2096 Female, age 85, both hemispheres 354.6
Nucleus cuneatus
nTPM: 722.6
2380 Male, age 80, both hemispheres 936.9
2808 Female, age 85, both hemispheres 889.3
2381 Male, age 80, both hemispheres 793.9
2564 Male, age 74, both hemispheres 793.3
2805 Female, age 91, both hemispheres 787.8
2376 Male, age 61, both hemispheres 680.2
2562 Male, age 61, both hemispheres 581.1
2100 Male, age 76, both hemispheres 565.3
2131 Male, age 76, both hemispheres 475.6
Nucleus gracilis
nTPM: 718.6
2382 Male, age 80, both hemispheres 825.6
2627 Male, age 74, both hemispheres 780.0
2299 Female, age 85, both hemispheres 550.3
Nucleus raphe magnus
nTPM: 403.9
2051 Male, age 76, both hemispheres 527.6
2459 Female, age 91, both hemispheres 485.3
2455 Male, age 74, both hemispheres 440.4
2328 Male, age 80, both hemispheres 418.0
2160 Male, age 61, both hemispheres 313.5
2172 Female, age 85, both hemispheres 238.9
Nucleus raphe obscurus
nTPM: 974.6
2845 Female, age 85, midline 1126.1
2142 Male, age 76, midline 1050.8
2800 Male, age 61, midline 747.0
Nucleus raphe pallidus
nTPM: 927.8
2145 Male, age 76, midline 1127.4
1924 Male, age 61, midline 887.7
2183 Male, age 80, midline 768.5
Nucleus tractus solitarii
nTPM: 464.8
2656 Male, age 76, both hemispheres 537.7
2144 Female, age 91, right hemisphere 469.3
2307 Male, age 80, both hemispheres 435.4
2191 Female, age 85, both hemispheres 416.8
Paramedian reticular nucleus
nTPM: 648.1
2052 Male, age 76, both hemispheres 794.8
2057 Male, age 80, both hemispheres 628.4
2313 Male, age 61, both hemispheres 589.5
2050 Female, age 85, both hemispheres 579.6
Parvicellular reticular nuclei
nTPM: 667.5
2095 Male, age 76, both hemispheres 785.3
2119 Male, age 80, both hemispheres 745.7
2558 Male, age 74, both hemispheres 471.5
Parvicellular reticular nuclei, medullary
nTPM: 537.5
2189 Female, age 91, both hemispheres 619.7
2181 Male, age 80, left hemisphere 497.7
2091 Female, age 85, both hemispheres 495.0
Pedunculopontine tegmental nucleus
nTPM: 680.5
2334 Male, age 80, both hemispheres 736.0
2338 Male, age 61, both hemispheres 725.6
1921 Female, age 85, both hemispheres 580.0
Peritrigeminal nucleus
nTPM: 673.0
2136 Male, age 76, both hemispheres 738.4
2067 Female, age 85, both hemispheres 706.7
2179 Male, age 61, both hemispheres 574.0
Pontine nuclei
nTPM: 452.4
2319 Female, age 91, both hemispheres 651.1
2454 Male, age 74, left hemisphere 582.6
2109 Female, age 72, unknown 529.7
2115 Male, age 80, left hemisphere 453.3
1863 Male, age 55, unknown 398.3
1968 Male, age 76, left hemisphere 382.5
2727 Male, age 61, right hemisphere 313.4
2787 Female, age 85, both hemispheres 308.0
Pontine raphe nucleus
nTPM: 577.2
2853 Male, age 76, midline 733.8
2122 Female, age 85, midline 420.6
Posteroventral cochlear nucleus
nTPM: 655.1
2341 Male, age 80, both hemispheres 879.7
2135 Female, age 91, both hemispheres 706.7
2371 Male, age 61, both hemispheres 647.9
2070 Male, age 76, both hemispheres 553.9
2752 Female, age 85, both hemispheres 487.2
Prepositus hypoglossal nucleus
nTPM: 782.2
2855 Female, age 85, right hemisphere 1034.4
2086 Male, age 80, both hemispheres 530.0
Principal sensory trigeminal nucleus
nTPM: 523.3
2367 Female, age 91, left hemisphere 684.2
2324 Male, age 76, both hemispheres 636.7
2158 Male, age 61, both hemispheres 390.3
2008 Male, age 80, left hemisphere 382.1
Reticular pontine nucleus, caudal
nTPM: 544.1
2559 Male, age 74, both hemispheres 756.8
2457 Female, age 91, both hemispheres 554.7
2092 Male, age 76, both hemispheres 508.4
2332 Male, age 80, right hemisphere 356.7
Reticular pontine nucleus, oral
nTPM: 649.1
2361 Male, age 74, both hemispheres 736.9
1939 Male, age 80, both hemispheres 708.5
2167 Male, age 76, both hemispheres 682.7
2366 Female, age 91, both hemispheres 559.3
2012 Female, age 85, both hemispheres 558.1
Reticulotegmental nucleus
nTPM: 650.3
2322 Female, age 91, both hemispheres 806.1
2452 Male, age 74, both hemispheres 668.6
2333 Male, age 80, both hemispheres 580.3
2325 Male, age 76, both hemispheres 546.3
Spinal trigeminal nucleus, caudal
nTPM: 608.7
2308 Male, age 80, both hemispheres 660.7
2642 Male, age 74, both hemispheres 609.1
2312 Male, age 61, both hemispheres 604.8
2390 Female, age 91, both hemispheres 600.8
2447 Male, age 76, both hemispheres 567.9
Spinal trigeminal nucleus, interpolar
nTPM: 542.1
2033 Male, age 80, both hemispheres 588.2
2625 Male, age 61, both hemispheres 587.3
2389 Female, age 91, both hemispheres 547.2
2066 Male, age 76, right hemisphere 521.3
2386 Female, age 85, both hemispheres 466.7
Spinal trigeminal nucleus, oral
nTPM: 510.0
2164 Male, age 80, both hemispheres 603.7
2737 Female, age 85, both hemispheres 469.2
1978 Male, age 76, both hemispheres 457.2
Spinal vestibular nucleus
nTPM: 661.0
2384 Male, age 74, both hemispheres 824.6
2806 Female, age 85, both hemispheres 772.7
2796 Male, age 61, both hemispheres 635.9
2748 Male, age 76, both hemispheres 632.3
2780 Male, age 80, both hemispheres 566.8
2186 Female, age 91, both hemispheres 533.8
Subcoeruleus area
nTPM: 634.8
2369 Female, age 85, left hemisphere 939.5
2451 Male, age 74, both hemispheres 632.9
1958 Male, age 80, both hemispheres 626.8
2323 Female, age 91, left hemisphere 548.2
2089 Male, age 76, left hemisphere 426.3
Superior olive
nTPM: 503.6
2364 Male, age 74, right hemisphere 590.0
2561 Female, age 91, both hemispheres 526.8
2020 Male, age 76, both hemispheres 512.6
2329 Male, age 80, right hemisphere 503.0
1875 Female, age 85, both hemispheres 385.5
Superior vestibular nucleus
nTPM: 738.6
2383 Male, age 74, both hemispheres 803.9
2015 Male, age 80, both hemispheres 741.9
2061 Male, age 76, both hemispheres 669.9
Ventral medullary reticular nucleus
nTPM: 680.4
2372 Male, age 61, both hemispheres 758.6
2060 Male, age 76, both hemispheres 602.2
Ventral periolivary nuclei
nTPM: 443.6
2023 Male, age 76, both hemispheres 540.3
2794 Female, age 91, left hemisphere 432.0
2165 Male, age 80, both hemispheres 426.9
2130 Female, age 85, both hemispheres 375.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 644.9
2180 Male, age 61, both hemispheres 688.8
2118 Male, age 80, both hemispheres 685.8
1986 Male, age 76, both hemispheres 645.3
2302 Female, age 91, both hemispheres 641.7
2741 Female, age 85, both hemispheres 562.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 558.4
2359 Male, age 61, both hemispheres 733.1
2840 Female, age 85, both hemispheres 657.8
2456 Female, age 91, both hemispheres 558.9
1959 Male, age 76, both hemispheres 474.5
2161 Male, age 80, both hemispheres 467.0
2449 Male, age 74, both hemispheres 459.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1299.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1299.6
FF:10182-103D2 60 years, female 1477.0
FF:10165-103B3 76 years, female 1122.3
Medulla oblongata
Scaled Tags Per Million: 1061.2
FF:10038-101F2 18-64 years, mixed 1249.9
FF:10174-103C3 60 years, female 1043.9
FF:10155-103A2 76 years, female 889.9
Pons
Scaled Tags Per Million: 700.1
FF:10033-101E6 18-54 years, mixed 700.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 1389.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 1389.0
Samples: 4

Max nTPM: 1692.0
Min nTPM: 1034.4
Sample A Female 1286.9
Sample B Female 1034.4
Sample C Male 1542.7
Sample D Male 1692.0
Pons
nTPM: 914.9
Samples: 4

Max nTPM: 1323.3
Min nTPM: 611.2
Sample A Female 611.2
Sample B Female 683.5
Sample C Male 1041.5
Sample D Male 1323.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 620.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 620.6
Samples: 4

Max nTPM: 649.6
Min nTPM: 569.3
Sample A Male 620.8
Sample B Male 569.3
Sample C Female 649.6
Sample D Female 642.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 10.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 9.6
68193012 Antisense, RP_040928_01_B12, Mouse strain C57BL/6J (56 days, male) 12.4
70928292 Antisense, RP_050725_02_C07, Mouse strain C57BL/6J (56 days, male) 9.9
77414654 Antisense, RP_070205_01_H12, Mouse strain C57BL/6J (56 days, male) 6.4
Pons
Expression energy: 10.5
70928292 Antisense, RP_050725_02_C07, Mouse strain C57BL/6J (56 days, male) 12.1
68193012 Antisense, RP_040928_01_B12, Mouse strain C57BL/6J (56 days, male) 11.9
77414654 Antisense, RP_070205_01_H12, Mouse strain C57BL/6J (56 days, male) 7.5

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