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CFAP36
HPA
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  • CFAP36
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CFAP36
Synonyms BARTL1, CCDC104, MGC15407
Gene descriptioni

Full gene name according to HGNC.

Cilia and flagella associated protein 36
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband p16.1
Chromosome location (bp) 55519604 - 55545079
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000163001 (version 109)
Entrez gene 112942
HGNC HGNC:30540
UniProt Q96G28 (UniProt - Evidence at protein level)
neXtProt NX_Q96G28
GeneCards CFAP36
Antibodypedia CFAP36 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

May act as an effector for ARL3.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables protein N-terminus binding activity. Located in ciliary transition zone. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CFAP36-201
ENSP00000342699
ENST00000339012
Q96G28
[Direct mapping] Cilia- and flagella-associated protein 36
Show all
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005929 [cilium]
GO:0005930 [axoneme]
GO:0008150 [biological_process]
GO:0031514 [motile cilium]
GO:0035869 [ciliary transition zone]
GO:0042995 [cell projection]
GO:0043227 [membrane-bounded organelle]
GO:0047485 [protein N-terminus binding]
GO:0097546 [ciliary base]
Show all
367 aa
41.9 kDa
No 0
CFAP36-202
ENSP00000295117
ENST00000349456
Q96G28
[Direct mapping] Cilia- and flagella-associated protein 36
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005929 [cilium]
GO:0005930 [axoneme]
GO:0008150 [biological_process]
GO:0031514 [motile cilium]
GO:0035869 [ciliary transition zone]
GO:0042995 [cell projection]
GO:0043227 [membrane-bounded organelle]
GO:0047485 [protein N-terminus binding]
GO:0097546 [ciliary base]
Show all
342 aa
39.4 kDa
No 0
CFAP36-203
ENSP00000385972
ENST00000403007
B5MD16
[Direct mapping] Cilia- and flagella-associated protein 36
Show all
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005737 [cytoplasm]
GO:0005929 [cilium]
GO:0042995 [cell projection]
GO:0043227 [membrane-bounded organelle]
Show all
223 aa
26.2 kDa
No 0
CFAP36-204
ENSP00000385400
ENST00000406691
B5MC35
[Direct mapping] Cilia- and flagella-associated protein 36
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005737 [cytoplasm]
GO:0005929 [cilium]
GO:0042995 [cell projection]
GO:0043227 [membrane-bounded organelle]
Show all
218 aa
25 kDa
No 0
CFAP36-205
ENSP00000385376
ENST00000407816
B5MCA1
[Direct mapping] Cilia- and flagella-associated protein 36
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005737 [cytoplasm]
GO:0005929 [cilium]
GO:0042995 [cell projection]
GO:0043227 [membrane-bounded organelle]
Show all
313 aa
36.1 kDa
No 0

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