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TGFA
HPA
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  • TGFA
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

TGFA
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Transforming growth factor alpha
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Human disease related genes
Plasma proteins
RAS pathway related proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted, Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband p13.3
Chromosome location (bp) 70447284 - 70554193
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000163235 (version 109)
Entrez gene 7039
HGNC HGNC:11765
UniProt P01135 (UniProt - Evidence at protein level)
neXtProt NX_P01135
GeneCards TGFA
Antibodypedia TGFA antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

TGF alpha is a mitogenic polypeptide that is able to bind to the EGF receptor/EGFR and to act synergistically with TGF beta to promote anchorage-independent cell proliferation in soft agar.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Growth factor, Mitogen
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a growth factor that is a ligand for the epidermal growth factor receptor, which activates a signaling pathway for cell proliferation, differentiation and development. This protein may act as either a transmembrane-bound ligand or a soluble ligand. This gene has been associated with many types of cancers, and it may also be involved in some cases of cleft lip/palate. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2011]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
TGFA-201
ENSP00000295400
ENST00000295400
P01135
[Direct mapping] Protransforming growth factor alpha Transforming growth factor alpha
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Predicted secreted proteins
Plasma proteins
RAS pathway related proteins
Cancer-related genes
   Candidate cancer biomarkers
Human disease related genes
   Cancers
   Cancers of the digestive system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0001525 [angiogenesis]
GO:0005102 [signaling receptor binding]
GO:0005154 [epidermal growth factor receptor binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005634 [nucleus]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0007173 [epidermal growth factor receptor signaling pathway]
GO:0008083 [growth factor activity]
GO:0008284 [positive regulation of cell population proliferation]
GO:0009410 [response to xenobiotic stimulus]
GO:0009986 [cell surface]
GO:0012507 [ER to Golgi transport vesicle membrane]
GO:0016020 [membrane]
GO:0016323 [basolateral plasma membrane]
GO:0030297 [transmembrane receptor protein tyrosine kinase activator activity]
GO:0030669 [clathrin-coated endocytic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0033116 [endoplasmic reticulum-Golgi intermediate compartment membrane]
GO:0035556 [intracellular signal transduction]
GO:0038134 [ERBB2-EGFR signaling pathway]
GO:0042060 [wound healing]
GO:0043066 [negative regulation of apoptotic process]
GO:0043406 [positive regulation of MAP kinase activity]
GO:0045741 [positive regulation of epidermal growth factor-activated receptor activity]
GO:0045840 [positive regulation of mitotic nuclear division]
GO:0048018 [receptor ligand activity]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050679 [positive regulation of epithelial cell proliferation]
GO:0050731 [positive regulation of peptidyl-tyrosine phosphorylation]
GO:0051781 [positive regulation of cell division]
GO:0060749 [mammary gland alveolus development]
GO:0072574 [hepatocyte proliferation]
Show all
160 aa
17 kDa
Yes 1
TGFA-202
ENSP00000377787
ENST00000394241
F8WA74
[Direct mapping] Protransforming growth factor alpha
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Predicted secreted proteins
RAS pathway related proteins
Human disease related genes
   Cancers
   Cancers of the digestive system
   DeepTMHMM predicted membrane proteins
Show all
GO:0005102 [signaling receptor binding]
GO:0005154 [epidermal growth factor receptor binding]
GO:0007165 [signal transduction]
GO:0008083 [growth factor activity]
GO:0016020 [membrane]
GO:0030669 [clathrin-coated endocytic vesicle membrane]
Show all
120 aa
12.5 kDa
Yes 1
TGFA-203
ENSP00000404099
ENST00000418333
P01135
[Direct mapping] Protransforming growth factor alpha Transforming growth factor alpha
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Predicted secreted proteins
Plasma proteins
RAS pathway related proteins
Cancer-related genes
   Candidate cancer biomarkers
Human disease related genes
   Cancers
   Cancers of the digestive system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005102 [signaling receptor binding]
GO:0005154 [epidermal growth factor receptor binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0007173 [epidermal growth factor receptor signaling pathway]
GO:0008083 [growth factor activity]
GO:0008284 [positive regulation of cell population proliferation]
GO:0009986 [cell surface]
GO:0012507 [ER to Golgi transport vesicle membrane]
GO:0016020 [membrane]
GO:0016323 [basolateral plasma membrane]
GO:0030669 [clathrin-coated endocytic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0033116 [endoplasmic reticulum-Golgi intermediate compartment membrane]
GO:0035556 [intracellular signal transduction]
GO:0038134 [ERBB2-EGFR signaling pathway]
GO:0043406 [positive regulation of MAP kinase activity]
GO:0045741 [positive regulation of epidermal growth factor-activated receptor activity]
GO:0045840 [positive regulation of mitotic nuclear division]
GO:0048018 [receptor ligand activity]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050679 [positive regulation of epithelial cell proliferation]
GO:0051781 [positive regulation of cell division]
Show all
159 aa
16.9 kDa
Yes 1
TGFA-204
ENSP00000407432
ENST00000419940
H0Y6S5
[Direct mapping] Protransforming growth factor alpha
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Predicted secreted proteins
RAS pathway related proteins
Human disease related genes
   Cancers
   Cancers of the digestive system
   DeepTMHMM predicted membrane proteins
Show all
GO:0005102 [signaling receptor binding]
GO:0005154 [epidermal growth factor receptor binding]
GO:0007165 [signal transduction]
GO:0008083 [growth factor activity]
GO:0016020 [membrane]
GO:0030669 [clathrin-coated endocytic vesicle membrane]
Show all
131 aa
14.2 kDa
No 1
TGFA-205
ENSP00000404131
ENST00000444975
F8VNR3
[Direct mapping] Protransforming growth factor alpha
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Predicted secreted proteins
RAS pathway related proteins
Human disease related genes
   Cancers
   Cancers of the digestive system
   DeepTMHMM predicted membrane proteins
Show all
GO:0005102 [signaling receptor binding]
GO:0005154 [epidermal growth factor receptor binding]
GO:0007165 [signal transduction]
GO:0008083 [growth factor activity]
GO:0016020 [membrane]
GO:0030669 [clathrin-coated endocytic vesicle membrane]
Show all
166 aa
17.8 kDa
Yes 1
TGFA-206
ENSP00000387493
ENST00000445399
P01135
[Direct mapping] Protransforming growth factor alpha Transforming growth factor alpha
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Predicted secreted proteins
Plasma proteins
RAS pathway related proteins
Cancer-related genes
   Candidate cancer biomarkers
Human disease related genes
   Cancers
   Cancers of the digestive system
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005102 [signaling receptor binding]
GO:0005154 [epidermal growth factor receptor binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0007173 [epidermal growth factor receptor signaling pathway]
GO:0008083 [growth factor activity]
GO:0008284 [positive regulation of cell population proliferation]
GO:0009986 [cell surface]
GO:0012507 [ER to Golgi transport vesicle membrane]
GO:0016020 [membrane]
GO:0016323 [basolateral plasma membrane]
GO:0030669 [clathrin-coated endocytic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0033116 [endoplasmic reticulum-Golgi intermediate compartment membrane]
GO:0035556 [intracellular signal transduction]
GO:0038134 [ERBB2-EGFR signaling pathway]
GO:0043406 [positive regulation of MAP kinase activity]
GO:0045741 [positive regulation of epidermal growth factor-activated receptor activity]
GO:0045840 [positive regulation of mitotic nuclear division]
GO:0048018 [receptor ligand activity]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050679 [positive regulation of epithelial cell proliferation]
GO:0051781 [positive regulation of cell division]
Show all
161 aa
17.1 kDa
Yes 1
TGFA-207
ENSP00000414127
ENST00000450929
E7EPT6
[Direct mapping] Protransforming growth factor alpha
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Predicted secreted proteins
RAS pathway related proteins
Human disease related genes
   Cancers
   Cancers of the digestive system
   DeepTMHMM predicted membrane proteins
Show all
GO:0005102 [signaling receptor binding]
GO:0005154 [epidermal growth factor receptor binding]
GO:0007165 [signal transduction]
GO:0008083 [growth factor activity]
GO:0016020 [membrane]
GO:0030669 [clathrin-coated endocytic vesicle membrane]
Show all
165 aa
17.7 kDa
Yes 1

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