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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HAIR HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:104.8 nTPM
GTEx:104.8 nTPM
FANTOM5:0.0 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA046937
Squamous epithelial cells Low

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.8
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 104.8
Samples: 156

Max nTPM: 687.5
Min nTPM: 0.0
Std nTPM: 115.8
Median nTPM: 78.7
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 687.5
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 473.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 440.7
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 410.1
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 398.2
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 364.4
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 343.3
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 333.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 323.3
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 322.5
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 318.2
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 317.2
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 305.5
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 302.8
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 286.1
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 277.3
GTEX-1C475-0526-SM-793AC 40-49 years, female 233.7
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 229.4
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 227.9
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 226.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 218.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 217.6
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 212.4
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 211.7
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 209.7
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 199.5
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 190.8
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 188.8
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 185.7
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 182.0
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 181.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 172.6
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 170.1
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 168.6
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 166.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 165.1
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 160.9
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 154.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 154.2
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 151.7
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 151.6
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 147.8
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 147.0
GTEX-14PKU-1326-SM-6871B 40-49 years, female 142.3
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 142.2
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 138.8
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 136.5
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 134.4
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 132.8
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 132.5
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 131.9
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 128.8
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 127.3
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 126.9
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 125.0
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 122.7
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 120.3
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 118.9
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 117.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 116.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 114.0
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 111.1
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 110.2
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 103.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 102.8
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 102.2
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 96.7
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 94.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 90.7
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 90.1
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 88.5
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 86.6
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 85.4
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 83.7
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 81.1
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 80.9
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 80.1
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 79.8
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 77.6
GTEX-QCQG-1226-SM-48U23 50-59 years, female 77.4
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 73.5
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 72.3
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 72.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 60.7
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 58.9
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 52.1
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 50.6
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 50.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 49.7
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 49.3
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 49.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 48.4
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 47.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 47.3
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 46.7
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 46.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 41.8
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 36.5
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 33.2
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 33.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 32.3
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 29.8
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 28.8
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 25.7
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 23.8
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 19.3
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 18.4
GTEX-16NPV-2526-SM-6M483 50-59 years, female 17.9
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 17.5
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 17.3
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 13.3
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 13.2
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 11.1
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 10.2
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 9.8
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 8.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 8.3
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 7.7
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 7.7
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 7.0
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 6.4
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 5.9
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 5.9
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 3.5
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 3.0
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 3.0
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 2.8
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 2.0
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 2.0
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 0.9
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 0.9
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 0.9
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 0.7
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 0.6
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 0.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 0.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 0.5
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 0.4
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 0.4
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 0.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 0.4
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 0.4
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 0.4
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 0.3
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 0.3
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 0.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 0.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 0.2
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 0.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 0.1
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 0.1
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 0.1
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 0.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 0.1
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 0.1
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 0.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

0
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 0.0
FF:10204-103F6 68 years, female 0.0

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