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DCST1
HPA
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  • DCST1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

DCST1
Synonyms FLJ32785
Gene descriptioni

Full gene name according to HGNC.

DC-STAMP domain containing 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband q21.3
Chromosome location (bp) 155033824 - 155050930
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000163357 (version 109)
Entrez gene 149095
HGNC HGNC:26539
UniProt Q5T197 (UniProt - Evidence at protein level)
neXtProt NX_Q5T197
GeneCards DCST1
Antibodypedia DCST1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

E3 ubiquitin-protein ligase which mediates 'Lys-48'-linked ubiquitination of STAT2 and induces its proteasomal degradation thereby negatively regulating type-I-interferon signaling. Essential sperm cell-surface protein required for sperm-egg fusion and fertilization (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Transferase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Immunity, Innate immunity, Ubl conjugation pathway
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a protein with a domain similar to one found in dendritic cells (PMID:11169400) which play a key role in antigen processing and display for immune responses. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2011]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
DCST1-201
ENSP00000295542
ENST00000295542
Q5T197
[Direct mapping] E3 ubiquitin-protein ligase DCST1
Show all
Enzymes
   ENZYME proteins
   Transferases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   6TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0002080 [acrosomal membrane]
GO:0002376 [immune system process]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006511 [ubiquitin-dependent protein catabolic process]
GO:0007342 [fusion of sperm to egg plasma membrane involved in single fertilization]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016567 [protein ubiquitination]
GO:0016740 [transferase activity]
GO:0031410 [cytoplasmic vesicle]
GO:0035036 [sperm-egg recognition]
GO:0045087 [innate immune response]
GO:0046872 [metal ion binding]
GO:0060339 [negative regulation of type I interferon-mediated signaling pathway]
GO:0061630 [ubiquitin protein ligase activity]
Show all
706 aa
80.7 kDa
No 6
DCST1-202
ENSP00000357404
ENST00000368419
Q5T197
[Direct mapping] E3 ubiquitin-protein ligase DCST1
Show all
Enzymes
   ENZYME proteins
   Transferases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   6TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0002080 [acrosomal membrane]
GO:0002376 [immune system process]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006511 [ubiquitin-dependent protein catabolic process]
GO:0007342 [fusion of sperm to egg plasma membrane involved in single fertilization]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016567 [protein ubiquitination]
GO:0016740 [transferase activity]
GO:0031410 [cytoplasmic vesicle]
GO:0035036 [sperm-egg recognition]
GO:0045087 [innate immune response]
GO:0046872 [metal ion binding]
GO:0060339 [negative regulation of type I interferon-mediated signaling pathway]
GO:0061630 [ubiquitin protein ligase activity]
Show all
664 aa
75.7 kDa
No 6
DCST1-204
ENSP00000387369
ENST00000423025
Q5T197
[Direct mapping] E3 ubiquitin-protein ligase DCST1
Show all
Enzymes
   ENZYME proteins
   Transferases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   6TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0002080 [acrosomal membrane]
GO:0002376 [immune system process]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006511 [ubiquitin-dependent protein catabolic process]
GO:0007342 [fusion of sperm to egg plasma membrane involved in single fertilization]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016567 [protein ubiquitination]
GO:0016740 [transferase activity]
GO:0031410 [cytoplasmic vesicle]
GO:0035036 [sperm-egg recognition]
GO:0045087 [innate immune response]
GO:0046872 [metal ion binding]
GO:0060339 [negative regulation of type I interferon-mediated signaling pathway]
GO:0061630 [ubiquitin protein ligase activity]
Show all
681 aa
77.7 kDa
No 6

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