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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
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Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:178.7 nTPM
GTEx:178.7 nTPM
FANTOM5:34.3 Scaled Tags Per Million

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

178.7
GTEx sample id Sample description nTPM
Retina
Average nTPM: 178.7
Samples: 105

Max nTPM: 320.8
Min nTPM: 95.0
Std nTPM: 33.9
Median nTPM:
413_1 59 years, female 320.8
501_1 88 years, male 299.5
506_1 65 years, male 242.3
120_1 70 years, female 236.3
396_1 62 years, male 229.6
145_1 84 years, male 229.3
313_1 79 years, female 229.3
142_1 61 years, female 217.8
324_1 76 years, male 217.3
177_1 74 years, male 212.9
265_1 87 years, male 210.8
414_1 84 years, female 210.8
288_1 66 years, female 209.9
32_1 67 years, male 209.3
229_1 69 years, female 205.8
314_1 67 years, male 204.5
466_1 57 years, female 203.8
81_1 67 years, male 203.6
321_1 62 years, female 203.0
415_1 77 years, female 202.7
517_1 88 years, male 199.8
4_1 88 years, female 199.7
315_1 62 years, female 199.2
518_1 75 years, female 198.9
119_1 70 years, female 198.1
264_1 73 years, female 198.0
162_1 79 years, female 197.8
292_1 71 years, male 196.6
491_1 89 years, female 194.6
17_1 71 years, male 193.8
6_1 73 years, female 193.5
18_1 88 years, male 193.5
316_1 62 years, male 192.9
217_1 76 years, male 192.1
149_1 88 years, male 191.4
406_1 79 years, male 191.3
243_1 75 years, male 190.8
43_1 64 years, female 189.2
109_1 81 years, female 188.7
526_1 61 years, male 188.4
386_1 76 years, male 187.9
404_1 82 years, female 186.8
295_1 61 years, female 184.8
353_1 82 years, female 182.7
468_1 89 years, male 182.7
379_1 60 years, male 182.3
375_1 74 years, female 181.1
499_1 55 years, female 180.7
335_1 73 years, female 180.4
376_1 75 years, female 180.1
115_1 83 years, male 179.2
153_1 70 years, female 179.2
452_1 88 years, female 178.8
89_1 63 years, male 178.3
320_1 89 years, female 178.3
139_1 64 years, female 178.2
254_1 77 years, female 178.0
425_1 59 years, female 177.5
9_1 66 years, female 177.0
173_1 67 years, male 176.5
348_1 84 years, male 173.5
172_1 72 years, female 173.2
405_1 91 years, male 172.8
347_1 72 years, male 170.1
349_1 83 years, male 168.7
377_1 82 years, female 168.3
2_1 77 years, female 167.7
117_1 61 years, male 167.6
318_1 68 years, male 167.0
503_1 68 years, male 166.5
286_1 68 years, female 166.1
352_1 62 years, male 165.9
42_1 85 years, male 165.4
351_1 91 years, male 165.0
480_1 63 years, male 162.1
137_1 83 years, male 160.9
163_1 78 years, male 160.5
189_1 76 years, male 160.1
126_1 63 years, male 159.8
291_1 76 years, male 159.3
322_1 76 years, male 157.1
350_1 84 years, female 156.0
35_1 74 years, female 154.8
447_1 81 years, male 154.7
319_1 81 years, male 154.4
266_1 85 years, male 153.4
490_1 67 years, female 152.1
99_1 64 years, male 148.4
251_1 78 years, male 148.2
354_1 81 years, female 146.3
246_1 77 years, male 145.4
237_1 82 years, male 145.2
356_1 87 years, female 144.8
311_1 78 years, male 144.7
317_1 60 years, male 144.0
293_1 68 years, female 137.9
394_1 75 years, female 136.1
389_1 86 years, female 135.0
41_1 94 years, female 124.0
355_1 70 years, female 123.5
384_1 83 years, male 119.6
307_1 66 years, female 115.9
218_1 71 years, female 108.3
495_1 57 years, female 95.9
308_1 70 years, female 95.0
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

34.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 34.3
FF:10030-101E3 24-65 years, mixed 34.3

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