HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:49.2 nTPM
HPA Brain:64.9 nTPM
GTEx:49.2 nTPM
FANTOM5:118.9 Scaled Tags Per Million
Pig:77.7 nTPM
Mouse:68.6 nTPM
Allen mouse:13.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026828Antibody HPA051520Antibody CAB009748
Glial cells Not detectedLowNot detected
Neuronal cells MediumHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 64.9
Sample id Sample description nTPM
Hippocampus
nTPM: 59.6
1898 Male, age 80, left hemisphere 73.7
2621 Female, age 67, right hemisphere 61.9
2529 Female, age 94, left hemisphere 58.3
1855 Male, age 76, left hemisphere 57.9
1911 Female, age 85, right hemisphere 56.8
2148 Female, age 91, left hemisphere 49.0
Dentate gyrus
nTPM: 60.1
2530 Female, age 94, left hemisphere 69.3
2010 Male, age 76, both hemispheres 67.9
2528 Male, age 74, both hemispheres 62.5
1927 Female, age 91, both hemispheres 59.7
2246 Female, age 85, both hemispheres 55.7
2531 Female, age 67, both hemispheres 45.7
Entorhinal gyrus
nTPM: 55.4
2117 Female, age 91, right hemisphere 70.6
1938 Female, age 85, left hemisphere 59.2
2764 Male, age 80, right hemisphere 58.2
1787 Male, age 76, left hemisphere 56.3
2613 Female, age 94, left hemisphere 48.1
2686 Male, age 75, right hemisphere 40.2
Hippocampus, CA1
nTPM: 59.8
2749 Male, age 80, left hemisphere 67.9
1873 Female, age 85, both hemispheres 62.8
2527 Male, age 74, both hemispheres 59.9
2045 Male, age 76, both hemispheres 54.6
2082 Female, age 91, right hemisphere 53.9
Hippocampus, CA2
nTPM: 64.9
2249 Male, age 74, both hemispheres 79.6
1963 Male, age 80, left hemisphere 71.2
1892 Male, age 76, both hemispheres 63.1
1940 Female, age 85, left hemisphere 61.1
2437 Female, age 94, left hemisphere 60.1
2113 Female, age 91, right hemisphere 54.0
Hippocampus, CA3
nTPM: 57.2
2436 Male, age 74, both hemispheres 81.5
1867 Male, age 76, both hemispheres 61.6
1891 Female, age 85, both hemispheres 60.1
2137 Male, age 80, left hemisphere 49.8
2620 Female, age 94, left hemisphere 49.8
2861 Female, age 67, both hemispheres 40.6
Parahippocampal cortex
nTPM: 52.7
1850 Male, age 80, both hemispheres 60.3
1990 Female, age 91, right hemisphere 58.9
2250 Female, age 67, right hemisphere 58.5
1933 Female, age 85, both hemispheres 57.4
2018 Male, age 76, both hemispheres 55.5
2532 Female, age 72, left hemisphere 52.2
2245 Female, age 91, both hemispheres 51.9
2693 Female, age 94, both hemispheres 49.6
2692 Male, age 74, both hemispheres 47.5
2622 Female, age 67, right hemisphere 34.7
Perirhinal gyrus
nTPM: 58.6
1847 Female, age 91, left hemisphere 62.3
1841 Female, age 85, right hemisphere 60.9
1794 Male, age 80, right hemisphere 60.6
2521 Female, age 94, right hemisphere 60.4
2848 Male, age 76, right hemisphere 48.8
Subiculum
nTPM: 60.6
2042 Male, age 76, both hemispheres 69.4
1977 Female, age 85, both hemispheres 63.0
1901 Male, age 80, both hemispheres 60.2
2729 Female, age 91, right hemisphere 59.2
2619 Male, age 74, both hemispheres 57.1
2438 Female, age 94, left hemisphere 54.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 49.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.2
Samples: 197

Max nTPM: 100.6
Min nTPM: 25.3
Std nTPM: 9.4
Median nTPM: 48.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 100.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 77.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 77.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 74.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 71.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 71.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 68.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 66.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 65.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 64.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 64.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 118.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 118.9
FF:10153-102I9 76 years, female 134.1
FF:10169-103B7 60 years, female 103.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 77.7
Pig sample Sample description nTPM
Subiculum
nTPM: 68.2
Samples: 4

Max nTPM: 79.2
Min nTPM: 64.0
Sample A Female 79.2
Sample B Female 64.4
Sample C Male 64.0
Sample D Male 65.1
Dorsal hippocampus
nTPM: 77.7
Samples: 4

Max nTPM: 90.4
Min nTPM: 68.2
Sample A Female 90.4
Sample B Female 80.3
Sample C Male 71.8
Sample D Male 68.2
Entorhinal cortex
nTPM: 65.5
Samples: 4

Max nTPM: 72.2
Min nTPM: 55.7
Sample A Female 72.2
Sample B Female 68.0
Sample C Male 66.0
Sample D Male 55.7
Ventral hippocampus
nTPM: 75.2
Samples: 4

Max nTPM: 93.8
Min nTPM: 56.6
Sample A Female 77.4
Sample B Female 56.6
Sample C Male 93.8
Sample D Male 72.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 68.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 68.7
Samples: 4

Max nTPM: 78.2
Min nTPM: 64.2
Sample A Male 64.9
Sample B Male 64.2
Sample C Female 67.3
Sample D Female 78.2
Hippocampal formation
nTPM: 66.3
Samples: 4

Max nTPM: 72.1
Min nTPM: 61.5
Sample A Male 61.5
Sample B Male 64.3
Sample C Female 72.1
Sample D Female 67.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 13.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.0
75774675 Antisense, RP_060530_01_C12, Mouse strain C57BL/6J (56 days, male) 14.7
638734 Antisense, RP_040831_02_F02, Mouse strain C57BL/6J (56 days, male) 11.2

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