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ABLIM2
HPA
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  • ABLIM2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ABLIM2
Synonyms KIAA1808
Gene descriptioni

Full gene name according to HGNC.

Actin binding LIM protein family member 2
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 4
Cytoband p16.1
Chromosome location (bp) 7965310 - 8158832
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

11
Ensembl ENSG00000163995 (version 109)
Entrez gene 84448
HGNC HGNC:19195
UniProt Q6H8Q1 (UniProt - Evidence at protein level)
neXtProt NX_Q6H8Q1
GeneCards ABLIM2
Antibodypedia ABLIM2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

May act as scaffold protein. May stimulate ABRA activity and ABRA-dependent SRF transcriptional activity.... show less
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable actin filament binding activity. Predicted to be involved in lamellipodium assembly. Predicted to act upstream of or within positive regulation of transcription by RNA polymerase II. Located in actin cytoskeleton. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ABLIM2-201
ENSP00000342813
ENST00000341937
Q6H8Q1
[Direct mapping] Actin-binding LIM protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005737 [cytoplasm]
GO:0006351 [DNA-templated transcription]
GO:0007010 [cytoskeleton organization]
GO:0015629 [actin cytoskeleton]
GO:0030032 [lamellipodium assembly]
GO:0030036 [actin cytoskeleton organization]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
GO:0110165 [cellular anatomical entity]
Show all
611 aa
67.8 kDa
No 0
ABLIM2-202
ENSP00000355003
ENST00000361581
Q6H8Q1
[Direct mapping] Actin-binding LIM protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005737 [cytoplasm]
GO:0006351 [DNA-templated transcription]
GO:0007010 [cytoskeleton organization]
GO:0015629 [actin cytoskeleton]
GO:0030032 [lamellipodium assembly]
GO:0030036 [actin cytoskeleton organization]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
GO:0110165 [cellular anatomical entity]
Show all
572 aa
63.6 kDa
No 0
ABLIM2-203
ENSP00000354887
ENST00000361737
Q6H8Q1
[Direct mapping] Actin-binding LIM protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005737 [cytoplasm]
GO:0006351 [DNA-templated transcription]
GO:0007010 [cytoskeleton organization]
GO:0015629 [actin cytoskeleton]
GO:0030032 [lamellipodium assembly]
GO:0030036 [actin cytoskeleton organization]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
GO:0110165 [cellular anatomical entity]
Show all
531 aa
59 kDa
No 0
ABLIM2-204
ENSP00000384658
ENST00000407564
Q6H8Q1
[Direct mapping] Actin-binding LIM protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0006351 [DNA-templated transcription]
GO:0007010 [cytoskeleton organization]
GO:0015629 [actin cytoskeleton]
GO:0030032 [lamellipodium assembly]
GO:0030036 [actin cytoskeleton organization]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
GO:0110165 [cellular anatomical entity]
Show all
521 aa
58 kDa
No 0
ABLIM2-205
ENSP00000389410
ENST00000428004
Q6H8Q1
[Direct mapping] Actin-binding LIM protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005737 [cytoplasm]
GO:0006351 [DNA-templated transcription]
GO:0007010 [cytoskeleton organization]
GO:0015629 [actin cytoskeleton]
GO:0030032 [lamellipodium assembly]
GO:0030036 [actin cytoskeleton organization]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
GO:0110165 [cellular anatomical entity]
Show all
470 aa
51.7 kDa
No 0
ABLIM2-206
ENSP00000393511
ENST00000447017
Q6H8Q1
[Direct mapping] Actin-binding LIM protein 2
Show all
A0A140VK02
[Target identity:100%; Query identity:100%] Testis tissue sperm-binding protein Li 35a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005737 [cytoplasm]
GO:0006351 [DNA-templated transcription]
GO:0007010 [cytoskeleton organization]
GO:0015629 [actin cytoskeleton]
GO:0030032 [lamellipodium assembly]
GO:0030036 [actin cytoskeleton organization]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
GO:0110165 [cellular anatomical entity]
Show all
645 aa
71.5 kDa
No 0
ABLIM2-209
ENSP00000421283
ENST00000505872
Q6H8Q1
[Direct mapping] Actin-binding LIM protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005737 [cytoplasm]
GO:0006351 [DNA-templated transcription]
GO:0007010 [cytoskeleton organization]
GO:0015629 [actin cytoskeleton]
GO:0030032 [lamellipodium assembly]
GO:0030036 [actin cytoskeleton organization]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
GO:0110165 [cellular anatomical entity]
Show all
559 aa
62 kDa
No 0
ABLIM2-211
ENSP00000421718
ENST00000510277
D6RAL0
[Direct mapping] Actin-binding LIM protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0006351 [DNA-templated transcription]
GO:0030036 [actin cytoskeleton organization]
Show all
305 aa
33.6 kDa
No 0
ABLIM2-213
ENSP00000423661
ENST00000514025
Q6H8Q1
[Direct mapping] Actin-binding LIM protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005737 [cytoplasm]
GO:0006351 [DNA-templated transcription]
GO:0007010 [cytoskeleton organization]
GO:0015629 [actin cytoskeleton]
GO:0030032 [lamellipodium assembly]
GO:0030036 [actin cytoskeleton organization]
GO:0046872 [metal ion binding]
GO:0051015 [actin filament binding]
GO:0110165 [cellular anatomical entity]
Show all
346 aa
39 kDa
No 0
ABLIM2-215
ENSP00000441255
ENST00000545242
F5GYR0
[Direct mapping] Actin-binding LIM protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005737 [cytoplasm]
GO:0006351 [DNA-templated transcription]
GO:0007010 [cytoskeleton organization]
GO:0030036 [actin cytoskeleton organization]
GO:0046872 [metal ion binding]
GO:0110165 [cellular anatomical entity]
Show all
650 aa
72 kDa
No 0
ABLIM2-216
ENSP00000504601
ENST00000676532
A0A7I2V5G9
[Direct mapping] Actin-binding LIM protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005737 [cytoplasm]
GO:0006351 [DNA-templated transcription]
GO:0007010 [cytoskeleton organization]
GO:0030036 [actin cytoskeleton organization]
GO:0046872 [metal ion binding]
GO:0110165 [cellular anatomical entity]
Show all
627 aa
69.4 kDa
No 0

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