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SLC9B2
HPA
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  • SLC9B2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SLC9B2
Synonyms FLJ23984, NHA2, NHEDC2
Gene descriptioni

Full gene name according to HGNC.

Solute carrier family 9 member B2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 4
Cytoband q24
Chromosome location (bp) 103019868 - 103085829
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000164038 (version 109)
Entrez gene 133308
HGNC HGNC:25143
UniProt Q86UD5 (UniProt - Evidence at protein level)
neXtProt NX_Q86UD5
GeneCards SLC9B2
Antibodypedia SLC9B2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Electroneutral Na(+) Li(+)/H(+) antiporter that extrudes Na(+) or Li(+) in exchange for external protons across the membrane 1, 2, 3, 4, 5. Uses the proton gradient/membrane potential to extrude sodium 6. Contributes to the regulation of intracellular pH and sodium homeostasis (By similarity). Also able to mediate Na(+)/Li(+) antiporter activity in kidney 7. May play a physiological role in renal tubular function and blood pressure homeostasis (By similarity). Plays an important role for insulin secretion and clathrin-mediated endocytosis in beta-cells (By similarity). Involved in sperm motility and fertility (By similarity). It is controversial whether SLC9B2 plays a role in osteoclast differentiation or not (By similarity).... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Antiport, Hydrogen ion transport, Ion transport, Sodium transport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Sodium
Gene summary (Entrez)i

Useful information about the gene from Entrez

Sodium hydrogen antiporters, such as NHEDC2, convert the proton motive force established by the respiratory chain or the F1F0 mitochondrial ATPase into sodium gradients that drive other energy-requiring processes, transduce environmental signals into cell responses, or function in drug efflux (Xiang et al., 2007).[supplied by OMIM, Mar 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SLC9B2-201
ENSP00000354574
ENST00000362026
Q86UD5
[Direct mapping] Sodium/hydrogen exchanger 9B2
Show all
A0A024RDJ7
[Target identity:100%; Query identity:100%] Na_H_Exchanger domain-containing protein
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0005768 [endosome]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0006811 [ion transport]
GO:0006812 [cation transport]
GO:0006814 [sodium ion transport]
GO:0010008 [endosome membrane]
GO:0010348 [lithium:proton antiporter activity]
GO:0015297 [antiporter activity]
GO:0015299 [solute:proton antiporter activity]
GO:0015385 [sodium:proton antiporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016323 [basolateral plasma membrane]
GO:0016324 [apical plasma membrane]
GO:0030317 [flagellated sperm motility]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0031514 [motile cilium]
GO:0031966 [mitochondrial membrane]
GO:0034220 [ion transmembrane transport]
GO:0035725 [sodium ion transmembrane transport]
GO:0042802 [identical protein binding]
GO:0042995 [cell projection]
GO:0045202 [synapse]
GO:0055085 [transmembrane transport]
GO:0097228 [sperm principal piece]
GO:1902600 [proton transmembrane transport]
Show all
537 aa
57.6 kDa
No >9
SLC9B2-202
ENSP00000378265
ENST00000394785
Q86UD5
[Direct mapping] Sodium/hydrogen exchanger 9B2
Show all
A0A024RDJ7
[Target identity:100%; Query identity:100%] Na_H_Exchanger domain-containing protein
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0005768 [endosome]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0006811 [ion transport]
GO:0006812 [cation transport]
GO:0006814 [sodium ion transport]
GO:0010008 [endosome membrane]
GO:0010348 [lithium:proton antiporter activity]
GO:0015297 [antiporter activity]
GO:0015299 [solute:proton antiporter activity]
GO:0015385 [sodium:proton antiporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016323 [basolateral plasma membrane]
GO:0016324 [apical plasma membrane]
GO:0030317 [flagellated sperm motility]
GO:0030672 [synaptic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0031514 [motile cilium]
GO:0031966 [mitochondrial membrane]
GO:0034220 [ion transmembrane transport]
GO:0035725 [sodium ion transmembrane transport]
GO:0042802 [identical protein binding]
GO:0042995 [cell projection]
GO:0045202 [synapse]
GO:0055085 [transmembrane transport]
GO:0061178 [regulation of insulin secretion involved in cellular response to glucose stimulus]
GO:0072583 [clathrin-dependent endocytosis]
GO:0097228 [sperm principal piece]
GO:1902600 [proton transmembrane transport]
GO:2001206 [positive regulation of osteoclast development]
Show all
537 aa
57.6 kDa
No >9
SLC9B2-203
ENSP00000425385
ENST00000503103
B7Z676
[Direct mapping] Sodium/hydrogen exchanger 9B2; cDNA FLJ50743
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   8TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0006812 [cation transport]
GO:0006814 [sodium ion transport]
GO:0015299 [solute:proton antiporter activity]
GO:0015385 [sodium:proton antiporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030317 [flagellated sperm motility]
GO:0055085 [transmembrane transport]
GO:1902600 [proton transmembrane transport]
Show all
417 aa
45.1 kDa
No 8
SLC9B2-204
ENSP00000422477
ENST00000503230
E9PE63
[Direct mapping] Sodium/hydrogen exchanger 9B2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0006812 [cation transport]
GO:0006814 [sodium ion transport]
GO:0015299 [solute:proton antiporter activity]
GO:0015385 [sodium:proton antiporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030317 [flagellated sperm motility]
GO:0055085 [transmembrane transport]
GO:1902600 [proton transmembrane transport]
Show all
480 aa
51.5 kDa
No >9
SLC9B2-205
ENSP00000426305
ENST00000503818
D6RGJ7
[Direct mapping] Sodium/hydrogen exchanger 9B2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0006814 [sodium ion transport]
GO:0015385 [sodium:proton antiporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030317 [flagellated sperm motility]
Show all
143 aa
15.7 kDa
No 2
SLC9B2-207
ENSP00000421943
ENST00000506288
A0A0C4DGB3
[Direct mapping] Sodium/hydrogen exchanger 9B2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0006812 [cation transport]
GO:0006814 [sodium ion transport]
GO:0015299 [solute:proton antiporter activity]
GO:0015385 [sodium:proton antiporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0030317 [flagellated sperm motility]
GO:0055085 [transmembrane transport]
GO:1902600 [proton transmembrane transport]
Show all
354 aa
37.5 kDa
No >9

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