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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:102.1 nTPM
HPA Brain:100.4 nTPM
GTEx:102.1 nTPM
FANTOM5:219.1 Scaled Tags Per Million
Pig:14.4 nTPM
Mouse:95.6 nTPM
Allen mouse:3.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA035330Antibody CAB003677
Glial cells LowLow
Neuronal cells LowNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 64.8
2481 Female, age 94, left hemisphere 93.7
1857 Female, age 85, left hemisphere 73.3
1854 Male, age 80, left hemisphere 69.4
2290 Female, age 72, unknown 63.8
2288 Male, age 75, left hemisphere 62.4
2846 Female, age 79, unknown 59.0
2289 Male, age 61, right hemisphere 49.3
1781 Male, age 74, unknown 47.4
Globus pallidus, externus
nTPM: 91.3
1996 Male, age 80, right hemisphere 137.6
2772 Female, age 79, unknown 108.6
2395 Male, age 75, both hemispheres 107.3
2646 Male, age 61, right hemisphere 52.8
2567 Female, age 72, unknown 50.1
Globus pallidus, internus
nTPM: 100.4
2037 Male, age 80, right hemisphere 126.7
2778 Female, age 91, both hemispheres 117.2
1818 Male, age 74, unknown 105.9
2111 Female, age 85, right hemisphere 102.2
2287 Male, age 75, right hemisphere 94.7
2483 Female, age 94, right hemisphere 82.0
2566 Female, age 72, unknown 74.1
Nucleus accumbens
nTPM: 61.9
2391 Female, age 94, left hemisphere 84.5
2732 Male, age 80, right hemisphere 78.5
2698 Female, age 72, unknown 71.3
2286 Male, age 75, left hemisphere 70.6
1806 Female, age 85, left hemisphere 65.1
1856 Female, age 91, right hemisphere 44.4
1783 Male, age 74, unknown 43.9
2824 Male, age 61, right hemisphere 37.0
Nucleus basalis of Meynert
nTPM: 65.3
2821 Male, age 75, both hemispheres 74.7
2393 Male, age 80, right hemisphere 68.7
2484 Female, age 94, left hemisphere 60.2
2569 Male, age 61, both hemispheres 57.5
Nucleus of the diagonal band
nTPM: 45.9
1812 Female, age 91, both hemispheres 63.2
1979 Male, age 74, unknown 55.6
2775 Male, age 80, right hemisphere 41.1
2195 Female, age 85, both hemispheres 35.9
2029 Male, age 61, right hemisphere 33.9
Putamen
nTPM: 54.9
2482 Female, age 94, left hemisphere 93.9
1937 Female, age 91, right hemisphere 53.4
2489 Female, age 72, unknown 52.9
1829 Male, age 74, unknown 51.3
2466 Female, age 79, unknown 49.0
1838 Male, age 80, right hemisphere 46.8
2647 Male, age 75, left hemisphere 36.8
Septal nuclei
nTPM: 58.2
2199 Male, age 80, right hemisphere 87.0
2394 Male, age 61, left hemisphere 77.3
2629 Female, age 94, right hemisphere 59.5
2059 Female, age 85, both hemispheres 54.6
2009 Female, age 91, both hemispheres 48.1
2031 Female, age 72, unknown 43.5
1960 Male, age 74, unknown 37.0
Stria terminalis, bed nucleus
nTPM: 40.4
2201 Male, age 74, unknown 43.3
2486 Female, age 94, both hemispheres 39.0
1974 Female, age 91, both hemispheres 38.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 98.0
Samples: 246

Max nTPM: 307.7
Min nTPM: 34.2
Std nTPM: 35.5
Median nTPM: 94.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 307.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 224.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 177.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 176.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 172.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 171.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 170.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 169.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 168.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 166.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 166.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 161.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 161.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 160.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 160.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 157.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 153.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 148.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 146.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 145.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 141.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 140.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 140.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 140.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 139.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 138.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 137.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 136.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 135.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 135.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 133.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 133.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 133.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 133.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 133.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 132.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 132.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 132.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 131.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 131.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 131.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 131.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 130.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 130.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 130.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 129.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 129.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 129.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 127.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 127.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 125.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 125.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 124.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 124.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 123.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 123.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 122.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 122.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 121.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 121.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 121.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 120.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 119.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 118.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 118.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 117.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 117.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 117.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 115.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 115.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 115.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 115.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 114.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 113.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 113.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 113.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 113.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 112.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 112.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 111.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 111.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 111.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 111.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 110.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 109.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 109.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 108.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 107.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 107.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 107.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 106.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 106.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 105.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 105.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 104.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 104.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 104.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 103.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 103.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 102.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 102.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 102.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 101.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 101.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 101.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 101.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 100.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 100.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 99.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 99.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 98.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 98.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 98.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 97.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 96.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 96.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 96.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 96.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 95.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 95.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 95.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 95.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 94.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 94.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 94.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 94.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 94.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 93.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 93.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 93.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 92.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 92.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 91.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 91.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 90.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 90.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 90.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 90.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 90.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 90.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 90.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 90.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 89.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 89.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 88.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 87.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 87.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 86.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 86.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 84.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 84.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 83.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 83.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 82.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 82.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 81.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 81.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 81.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 81.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 80.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 78.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 78.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 78.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 77.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 77.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 76.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 75.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 75.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 75.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 74.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 74.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 73.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 73.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 73.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 73.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 73.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 73.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 72.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 72.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 71.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 71.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 70.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 70.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 70.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 70.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 69.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 69.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 69.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 69.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 68.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 68.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 68.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 67.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 66.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 66.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 65.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 65.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 65.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 65.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 63.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 63.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 63.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 62.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 61.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 61.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 61.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 60.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 60.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 60.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 60.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 60.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 59.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 59.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 59.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 58.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 58.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 58.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 57.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 57.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 57.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 57.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 57.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 56.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 56.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 55.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 55.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 55.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 54.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 54.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 54.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 54.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 54.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 53.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 53.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 52.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 52.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 50.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 49.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 48.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 46.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 45.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 45.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 43.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 43.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 38.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 34.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 90.1
Samples: 246

Max nTPM: 333.3
Min nTPM: 28.4
Std nTPM: 42.3
Median nTPM: 82.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 333.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 260.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 235.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 222.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 208.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 200.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 194.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 174.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 172.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 170.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 169.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 168.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 168.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 167.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 165.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 165.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 160.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 159.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 156.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 154.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 152.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 151.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 150.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 150.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 149.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 146.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 144.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 144.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 141.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 139.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 133.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 132.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 132.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 130.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 129.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 129.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 128.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 128.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 126.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 125.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 125.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 125.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 123.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 123.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 123.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 122.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 122.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 121.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 121.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 119.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 119.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 118.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 117.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 115.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 114.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 114.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 112.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 110.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 109.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 107.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 107.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 107.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 106.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 105.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 104.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 104.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 104.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 103.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 102.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 102.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 102.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 102.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 102.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 100.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 100.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 99.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 99.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 99.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 98.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 97.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 97.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 96.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 95.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 94.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 94.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 94.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 93.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 93.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 93.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 93.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 92.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 92.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 90.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 89.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 89.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 89.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 88.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 88.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 88.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 88.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 88.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 88.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 87.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 87.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 87.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 87.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 86.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 86.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 86.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 85.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 84.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 84.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 84.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 84.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 84.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 83.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 83.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 83.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 83.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 82.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 82.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 82.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 82.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 82.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 82.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 82.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 81.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 81.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 81.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 81.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 80.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 79.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 79.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 78.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 78.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 78.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 76.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 76.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 76.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 76.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 75.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 75.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 74.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 73.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 73.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 73.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 73.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 72.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 72.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 72.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 72.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 71.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 71.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 71.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 70.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 70.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 70.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 69.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 69.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 69.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 68.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 68.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 68.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 67.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 67.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 67.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 67.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 66.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 66.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 66.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 66.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 66.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 66.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 66.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 65.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 65.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 64.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 64.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 63.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 63.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 62.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 62.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 62.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 62.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 61.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 61.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 60.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 59.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 59.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 58.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 57.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 57.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 57.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 56.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 56.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 55.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 55.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 54.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 53.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 53.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 53.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 53.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 52.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 52.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 51.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 51.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 51.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 51.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 50.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 50.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 50.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 50.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 50.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 49.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 49.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 48.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 48.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 48.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 48.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 47.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 47.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 46.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 46.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 45.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 45.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 45.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 44.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 44.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 44.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 44.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 44.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 42.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 42.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 41.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 40.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 40.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 39.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 39.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 39.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 39.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 38.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 36.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 34.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 33.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 32.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 28.4
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Brain - Putamen (basal ganglia)
Average nTPM: 102.1
Samples: 205

Max nTPM: 241.9
Min nTPM: 42.0
Std nTPM: 34.2
Median nTPM: 97.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 241.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 208.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 191.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 183.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 181.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 180.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 178.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 178.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 171.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 167.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 165.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 163.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 159.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 158.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 156.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 151.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 150.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 148.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 146.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 145.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 145.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 144.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 142.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 142.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 140.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 140.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 140.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 139.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 139.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 139.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 136.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 135.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 134.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 133.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 132.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 132.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 132.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 131.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 131.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 131.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 130.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 130.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 130.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 130.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 129.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 128.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 128.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 127.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 124.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 124.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 123.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 120.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 120.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 120.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 120.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 120.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 119.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 119.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 118.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 118.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 118.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 117.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 117.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 116.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 116.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 116.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 115.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 114.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 114.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 113.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 113.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 113.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 113.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 112.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 112.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 111.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 111.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 111.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 111.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 110.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 110.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 110.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 109.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 109.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 108.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 108.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 108.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 106.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 105.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 105.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 104.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 103.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 103.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 102.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 102.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 102.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 100.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 100.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 100.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 99.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 99.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 99.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 97.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 96.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 96.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 96.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 95.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 94.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 94.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 92.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 92.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 91.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 91.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 91.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 89.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 89.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 88.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 88.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 88.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 88.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 87.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 86.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 86.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 84.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 84.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 84.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 83.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 83.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 83.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 83.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 82.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 82.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 82.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 81.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 81.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 81.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 80.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 80.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 80.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 80.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 79.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 79.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 79.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 78.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 78.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 78.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 78.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 78.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 77.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 77.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 77.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 77.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 77.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 76.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 75.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 75.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 75.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 75.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 74.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 74.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 74.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 73.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 73.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 71.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 70.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 69.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 69.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 69.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 69.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 69.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 69.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 69.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 68.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 68.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 68.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 68.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 67.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 67.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 67.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 67.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 67.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 66.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 66.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 64.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 64.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 63.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 63.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 61.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 61.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 60.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 59.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 56.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 56.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 55.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 55.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 55.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 54.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 54.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 52.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 52.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 50.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 49.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 46.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 46.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 42.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

219.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 121.3
FF:10164-103B2 76 years, female 121.3
Nucleus accumbens
Scaled Tags Per Million: 104.5
FF:10037-101F1 23-56 years, mixed 104.5
Putamen
Scaled Tags Per Million: 93.2
FF:10176-103C5 60 years, female 93.2
Globus pallidus
Scaled Tags Per Million: 219.1
FF:10175-103C4 60 years, female 242.4
FF:10161-103A8 76 years, female 195.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.4
Pig sample Sample description nTPM
Caudate
nTPM: 13.0
Samples: 4

Max nTPM: 14.1
Min nTPM: 12.4
Sample A Female 14.1
Sample B Female 12.4
Sample C Male 12.5
Sample D Male 13.0
Putamen
nTPM: 13.2
Samples: 4

Max nTPM: 16.6
Min nTPM: 11.3
Sample A Female 16.6
Sample B Female 11.6
Sample C Male 11.3
Sample D Male 13.1
Septum
nTPM: 14.4
Samples: 4

Max nTPM: 17.2
Min nTPM: 12.1
Sample A Female 12.1
Sample B Female 12.7
Sample C Male 17.2
Sample D Male 15.6
Ventral pallidum
nTPM: 12.9
Samples: 4

Max nTPM: 14.7
Min nTPM: 10.7
Sample A Female 10.7
Sample B Female 12.8
Sample C Male 14.7
Sample D Male 13.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 58.0
Samples: 4

Max nTPM: 60.7
Min nTPM: 53.3
Sample A Male 60.7
Sample B Male 60.1
Sample C Female 53.3
Sample D Female 57.7
Septum
nTPM: 95.6
Samples: 4

Max nTPM: 107.9
Min nTPM: 79.5
Sample A Male 79.5
Sample B Male 101.3
Sample C Female 107.9
Sample D Female 93.8
Ventral forebrain
nTPM: 65.0
Samples: 4

Max nTPM: 77.0
Min nTPM: 53.6
Sample A Male 53.6
Sample B Male 72.5
Sample C Female 77.0
Sample D Female 57.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.0
77454635 Antisense, RP_070129_01_B05, Mouse strain C57BL/6J (56 days, male) 2.0
79488933 Antisense, RP_070129_01_B05, Mouse strain C57BL/6J (56 days, male) 1.3
Pallidum
Expression energy: 3.2
77454635 Antisense, RP_070129_01_B05, Mouse strain C57BL/6J (56 days, male) 3.2
79488933 Antisense, RP_070129_01_B05, Mouse strain C57BL/6J (56 days, male) 2.2

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