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SLC25A46
HPA
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  • SLC25A46
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SLC25A46
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Solute carrier family 25 member 46
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 5
Cytoband q22.1
Chromosome location (bp) 110738136 - 110765161
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000164209 (version 109)
Entrez gene 91137
HGNC HGNC:25198
UniProt Q96AG3 (UniProt - Evidence at protein level)
neXtProt NX_Q96AG3
GeneCards SLC25A46
Antibodypedia SLC25A46 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Transmembrane protein of the mitochondrial outer membrane that controls mitochondrial organization 1, 2, 3. May regulate the assembly of the MICOS (mitochondrial contact site and cristae organizing system) complex which is essential to the biogenesis and dynamics of mitochondrial cristae, the inwards folds of the inner mitochondrial membrane 4. Through its interaction with the EMC (endoplasmic reticulum membrane protein complex), could regulate mitochondrial lipid homeostasis and thereby mitochondrial fission 5.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a mitochondrial solute carrier protein family member. It functions in promoting mitochondrial fission, and prevents the formation of hyperfilamentous mitochondria. Mutation of this gene results in neuropathy and optic atrophy. [provided by RefSeq, Aug 2016]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SLC25A46-201
ENSP00000348211
ENST00000355943
Q96AG3
[Direct mapping] Mitochondrial outer membrane protein SLC25A46
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000266 [mitochondrial fission]
GO:0000422 [autophagy of mitochondrion]
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005741 [mitochondrial outer membrane]
GO:0006839 [mitochondrial transport]
GO:0007005 [mitochondrion organization]
GO:0007416 [synapse assembly]
GO:0008535 [respiratory chain complex IV assembly]
GO:0016020 [membrane]
GO:0016358 [dendrite development]
GO:0021554 [optic nerve development]
GO:0021702 [cerebellar Purkinje cell differentiation]
GO:0022011 [myelination in peripheral nervous system]
GO:0031987 [locomotion involved in locomotory behavior]
GO:0042407 [cristae formation]
GO:0044877 [protein-containing complex binding]
GO:0048936 [peripheral nervous system neuron axonogenesis]
GO:0055091 [phospholipid homeostasis]
GO:0061564 [axon development]
GO:0065003 [protein-containing complex assembly]
GO:0090149 [mitochondrial membrane fission]
Show all
418 aa
46.2 kDa
No 1
SLC25A46-202
ENSP00000399717
ENST00000447245
Q96AG3
[Direct mapping] Mitochondrial outer membrane protein SLC25A46
Show all
Transporters
   Electrochemical Potential-driven transporters
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000266 [mitochondrial fission]
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005741 [mitochondrial outer membrane]
GO:0008535 [respiratory chain complex IV assembly]
GO:0016020 [membrane]
GO:0042407 [cristae formation]
GO:0044877 [protein-containing complex binding]
GO:0055091 [phospholipid homeostasis]
GO:0061564 [axon development]
GO:0065003 [protein-containing complex assembly]
GO:0090149 [mitochondrial membrane fission]
Show all
337 aa
37.2 kDa
No 0
SLC25A46-204
ENSP00000425708
ENST00000504098
Q96AG3
[Direct mapping] Mitochondrial outer membrane protein SLC25A46
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000266 [mitochondrial fission]
GO:0005515 [protein binding]
GO:0005739 [mitochondrion]
GO:0005741 [mitochondrial outer membrane]
GO:0008535 [respiratory chain complex IV assembly]
GO:0016020 [membrane]
GO:0042407 [cristae formation]
GO:0044877 [protein-containing complex binding]
GO:0055091 [phospholipid homeostasis]
GO:0061564 [axon development]
GO:0065003 [protein-containing complex assembly]
GO:0090149 [mitochondrial membrane fission]
Show all
272 aa
30.4 kDa
No 2
SLC25A46-206
ENSP00000426604
ENST00000509432
B7Z6C8
[Direct mapping] Mitochondrial outer membrane protein SLC25A46; cDNA FLJ58689
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
   Nervous system diseases
   Neurodegenerative diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005741 [mitochondrial outer membrane]
GO:0016020 [membrane]
GO:0090149 [mitochondrial membrane fission]
Show all
205 aa
23 kDa
No 1
SLC25A46-208
ENSP00000421134
ENST00000513807
E7EVY2
[Direct mapping] Mitochondrial outer membrane protein SLC25A46
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
   Nervous system diseases
   Neurodegenerative diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005741 [mitochondrial outer membrane]
GO:0016020 [membrane]
GO:0090149 [mitochondrial membrane fission]
Show all
256 aa
28.6 kDa
No 2

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