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FAM170A
HPA
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  • FAM170A
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

FAM170A
Synonyms ZNFD
Gene descriptioni

Full gene name according to HGNC.

Family with sequence similarity 170 member A
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 5
Cytoband q23.1
Chromosome location (bp) 119629558 - 119635822
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000164334 (version 109)
Entrez gene 340069
HGNC HGNC:27963
UniProt A1A519 (UniProt - Evidence at transcript level)
neXtProt NX_A1A519
GeneCards FAM170A
Antibodypedia FAM170A antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Acts as a nuclear transcription factor that positively regulates the expression of heat shock genes. Binds to heat shock promoter elements (HSE).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Activator, DNA-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Transcription, Transcription regulation
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable DNA binding activity and metal ion binding activity. Involved in positive regulation of transcription, DNA-templated and transcription by RNA polymerase II. Located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
FAM170A-201
ENSP00000334285
ENST00000335286
A1A519
[Direct mapping] Protein FAM170A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006366 [transcription by RNA polymerase II]
GO:0009566 [fertilization]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
Show all
329 aa
37.1 kDa
No 0
FAM170A-202
ENSP00000368873
ENST00000379555
A1A519
[Direct mapping] Protein FAM170A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0006366 [transcription by RNA polymerase II]
GO:0009566 [fertilization]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045893 [positive regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
Show all
282 aa
32.1 kDa
No 0
FAM170A-203
ENSP00000425939
ENST00000504819
D6RIE9
[Direct mapping] Protein FAM170A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005634 [nucleus]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045893 [positive regulation of DNA-templated transcription]
Show all
283 aa
32.2 kDa
No 0
FAM170A-204
ENSP00000511971
ENST00000695508
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005634 [nucleus]
GO:0045893 [positive regulation of DNA-templated transcription]
Show all
330 aa
37.2 kDa
No 0
FAM170A-205
ENSP00000511972
ENST00000695509
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005634 [nucleus]
GO:0045893 [positive regulation of DNA-templated transcription]
Show all
195 aa
22.2 kDa
No 0

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