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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:5.4 nTPM
HPA Brain:73.7 nTPM
GTEx:5.4 nTPM
FANTOM5:64.8 Scaled Tags Per Million
Pig:19.4 nTPM
Mouse:23.6 nTPM
Allen mouse:0.2 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044527
Glial cells Not detected
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 33.9
2288 Male, age 75, left hemisphere 44.6
2846 Female, age 79, unknown 37.8
1781 Male, age 74, unknown 35.7
1854 Male, age 80, left hemisphere 35.3
2289 Male, age 61, right hemisphere 31.4
2290 Female, age 72, unknown 30.8
2481 Female, age 94, left hemisphere 28.8
1857 Female, age 85, left hemisphere 26.9
Globus pallidus, externus
nTPM: 69.9
2395 Male, age 75, both hemispheres 80.3
2567 Female, age 72, unknown 76.4
1996 Male, age 80, right hemisphere 68.9
2772 Female, age 79, unknown 65.4
2646 Male, age 61, right hemisphere 58.5
Globus pallidus, internus
nTPM: 73.7
2111 Female, age 85, right hemisphere 96.2
2778 Female, age 91, both hemispheres 91.6
2287 Male, age 75, right hemisphere 90.0
2566 Female, age 72, unknown 70.0
1818 Male, age 74, unknown 61.2
2037 Male, age 80, right hemisphere 54.8
2483 Female, age 94, right hemisphere 51.9
Nucleus accumbens
nTPM: 42.4
2391 Female, age 94, left hemisphere 64.8
2698 Female, age 72, unknown 50.1
2732 Male, age 80, right hemisphere 41.7
2286 Male, age 75, left hemisphere 40.2
2824 Male, age 61, right hemisphere 39.5
1806 Female, age 85, left hemisphere 39.2
1783 Male, age 74, unknown 34.6
1856 Female, age 91, right hemisphere 29.4
Nucleus basalis of Meynert
nTPM: 41.8
2569 Male, age 61, both hemispheres 50.3
2821 Male, age 75, both hemispheres 46.8
2393 Male, age 80, right hemisphere 36.0
2484 Female, age 94, left hemisphere 34.1
Nucleus of the diagonal band
nTPM: 23.3
1812 Female, age 91, both hemispheres 26.8
2029 Male, age 61, right hemisphere 25.6
1979 Male, age 74, unknown 23.6
2775 Male, age 80, right hemisphere 20.8
2195 Female, age 85, both hemispheres 19.7
Putamen
nTPM: 37.1
1829 Male, age 74, unknown 43.7
2647 Male, age 75, left hemisphere 41.6
1937 Female, age 91, right hemisphere 39.6
2466 Female, age 79, unknown 35.7
2489 Female, age 72, unknown 34.8
2482 Female, age 94, left hemisphere 32.2
1838 Male, age 80, right hemisphere 31.9
Septal nuclei
nTPM: 27.8
2394 Male, age 61, left hemisphere 36.0
2629 Female, age 94, right hemisphere 34.0
2031 Female, age 72, unknown 29.7
2199 Male, age 80, right hemisphere 27.5
2009 Female, age 91, both hemispheres 25.0
2059 Female, age 85, both hemispheres 23.6
1960 Male, age 74, unknown 18.9
Stria terminalis, bed nucleus
nTPM: 29.8
1974 Female, age 91, both hemispheres 32.5
2201 Male, age 74, unknown 30.6
2486 Female, age 94, both hemispheres 26.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

5.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 4.5
Samples: 246

Max nTPM: 14.4
Min nTPM: 1.8
Std nTPM: 2.1
Median nTPM: 4.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 14.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 13.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 12.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 12.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 11.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 10.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 10.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 10.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 9.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 9.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 8.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 8.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 8.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 8.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 8.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 7.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 7.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 7.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 7.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 7.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 7.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 7.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 7.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 7.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 7.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 7.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 7.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 7.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 7.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 7.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 7.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 7.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 6.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 6.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 6.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 6.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 6.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 6.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 6.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 6.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 6.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 6.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 6.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 5.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 5.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 5.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 5.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 5.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 5.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 5.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 5.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 5.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 5.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 5.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 5.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 5.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 5.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 5.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 5.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 5.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 5.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 5.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 5.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 5.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 5.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 5.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 5.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 5.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 5.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 5.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 5.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 5.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 5.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 5.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 4.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 4.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 4.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 4.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 4.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 4.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 4.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 4.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 4.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 4.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 4.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 4.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 4.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 4.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 4.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 4.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 4.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 4.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 4.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 4.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 4.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 4.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 4.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 4.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 4.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 4.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 4.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 4.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 4.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 4.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 4.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 4.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 4.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 4.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 4.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 4.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 4.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 4.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 4.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 4.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 4.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 4.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 4.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 4.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 4.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 4.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 4.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 4.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 4.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 4.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 4.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 3.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 3.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 3.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 3.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 3.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 3.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 3.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 3.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 3.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 3.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 3.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 3.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 3.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 3.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 3.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 3.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 3.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 3.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 3.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 3.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 3.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 3.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 3.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 3.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 3.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 3.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 3.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 3.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 3.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 3.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 3.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 3.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 3.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 3.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 3.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 3.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 3.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 3.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 3.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 3.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 3.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 3.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 3.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 3.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 3.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 3.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 3.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 3.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 3.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 3.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 3.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 3.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 3.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 3.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 3.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 3.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 3.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 3.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 3.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 3.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 3.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 3.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 3.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 3.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 3.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 3.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 3.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 3.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 3.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 3.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 3.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 3.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 3.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 3.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 3.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 3.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 3.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 3.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 2.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 2.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 2.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 2.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 2.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 2.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 2.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 2.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 2.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 2.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 2.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 2.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 2.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 2.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 2.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 2.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 2.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 2.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 2.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 2.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 2.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 2.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 2.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 2.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 2.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 2.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 2.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 2.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 2.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 2.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 2.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 2.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 2.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 2.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 2.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 2.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 2.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 1.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 4.2
Samples: 246

Max nTPM: 35.3
Min nTPM: 1.3
Std nTPM: 3.0
Median nTPM: 3.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 35.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 23.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 12.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 11.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 11.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 11.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 9.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 9.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 9.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 9.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 9.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 8.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 8.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 7.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 7.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 7.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 7.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 7.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 7.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 7.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 7.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 7.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 7.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 7.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 6.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 6.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 6.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 6.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 6.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 5.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 5.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 5.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 5.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 5.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 5.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 5.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 5.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 5.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 5.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 5.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 5.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 5.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 5.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 5.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 5.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 5.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 5.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 5.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 5.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 5.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 5.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 5.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 5.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 5.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 4.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 4.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 4.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 4.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 4.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 4.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 4.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 4.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 4.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 4.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 4.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 4.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 4.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 4.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 4.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 4.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 4.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 4.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 4.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 4.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 4.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 4.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 4.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 4.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 4.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 4.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 4.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 4.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 4.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 4.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 4.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 4.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 4.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 4.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 4.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 4.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 4.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 4.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 4.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 4.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 4.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 4.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 4.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 4.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 4.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 4.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 3.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 3.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 3.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 3.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 3.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 3.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 3.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 3.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 3.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 3.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 3.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 3.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 3.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 3.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 3.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 3.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 3.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 3.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 3.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 3.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 3.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 3.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 3.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 3.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 3.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 3.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 3.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 3.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 3.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 3.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 3.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 3.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 3.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 3.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 3.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 3.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 3.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 3.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 3.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 3.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 3.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 3.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 3.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 3.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 3.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 3.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 3.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 3.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 3.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 3.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 3.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 3.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 3.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 3.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 3.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 3.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 3.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 3.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 3.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 3.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 3.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 3.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 3.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 3.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 3.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 2.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 2.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 2.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 2.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 2.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 2.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 2.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 2.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 2.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 2.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 2.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 2.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 2.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 2.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 2.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 2.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 2.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 2.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 2.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 2.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 2.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 2.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 2.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 2.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 2.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 2.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 2.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 2.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 2.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 2.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 2.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 2.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 2.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 2.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 2.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 2.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 2.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 2.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 2.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 2.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 2.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 2.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 2.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 2.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 2.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 2.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 2.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 2.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 2.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 2.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 2.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 2.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 2.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 2.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 2.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 2.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 2.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 2.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 2.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 2.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 2.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 2.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 2.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 2.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 2.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 2.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 2.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 1.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 1.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 1.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 1.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 1.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1.3
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Brain - Putamen (basal ganglia)
Average nTPM: 5.4
Samples: 205

Max nTPM: 18.8
Min nTPM: 2.2
Std nTPM: 2.4
Median nTPM: 4.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 18.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 17.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 13.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 12.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 12.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 12.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 11.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 10.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 10.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 10.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 9.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 9.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 8.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 8.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 8.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 8.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 8.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 8.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 8.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 8.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 8.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 8.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 8.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 8.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 7.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 7.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 7.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 7.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 7.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 7.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 7.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 7.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 7.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 7.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 7.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 7.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 7.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 7.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 7.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 7.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 6.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 6.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 6.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 6.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 6.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 6.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 6.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 6.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 6.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 6.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 6.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 6.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 6.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 6.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 6.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 6.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 6.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 6.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 6.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 6.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 6.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 6.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 6.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 6.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 6.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 5.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 5.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 5.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 5.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 5.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 5.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 5.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 5.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 5.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 5.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 5.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 5.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 5.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 5.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 5.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 5.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 5.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 5.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 5.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 5.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 5.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 5.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 5.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 5.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 5.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 5.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 5.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 5.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 5.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 5.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 5.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 5.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 4.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 4.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 4.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 4.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 4.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 4.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 4.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 4.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 4.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 4.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 4.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 4.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 4.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 4.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 4.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 4.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 4.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 4.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 4.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 4.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 4.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 4.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 4.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 4.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 4.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 4.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 4.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 4.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 4.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 4.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 4.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 4.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 4.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 4.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 4.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 4.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 4.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 4.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 4.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 4.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 4.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 4.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 4.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 4.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 4.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 4.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 4.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 4.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 4.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 4.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 4.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 3.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 3.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 3.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 3.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 3.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 3.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 3.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 3.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 3.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 3.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 3.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 3.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 3.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 3.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 3.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 3.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 3.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 3.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 3.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 3.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 3.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 3.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 3.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 3.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 3.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 3.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 3.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 3.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 3.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 3.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 3.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 3.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 3.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 3.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 3.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 3.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 3.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 3.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 2.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 2.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 2.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 2.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 2.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 2.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 2.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 2.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 2.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 2.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 2.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 2.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 2.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 2.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 2.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 2.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 2.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 2.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 2.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

64.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 29.8
FF:10164-103B2 76 years, female 29.8
Nucleus accumbens
Scaled Tags Per Million: 49.4
FF:10037-101F1 23-56 years, mixed 49.4
Putamen
Scaled Tags Per Million: 45.9
FF:10176-103C5 60 years, female 45.9
Globus pallidus
Scaled Tags Per Million: 64.8
FF:10175-103C4 60 years, female 66.7
FF:10161-103A8 76 years, female 62.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.4
Pig sample Sample description nTPM
Caudate
nTPM: 16.8
Samples: 4

Max nTPM: 18.1
Min nTPM: 14.3
Sample A Female 17.3
Sample B Female 17.3
Sample C Male 18.1
Sample D Male 14.3
Putamen
nTPM: 19.4
Samples: 4

Max nTPM: 21.5
Min nTPM: 16.6
Sample A Female 21.5
Sample B Female 16.6
Sample C Male 21.5
Sample D Male 18.1
Septum
nTPM: 14.2
Samples: 4

Max nTPM: 16.5
Min nTPM: 11.2
Sample A Female 16.0
Sample B Female 13.0
Sample C Male 16.5
Sample D Male 11.2
Ventral pallidum
nTPM: 17.5
Samples: 4

Max nTPM: 19.2
Min nTPM: 14.8
Sample A Female 14.8
Sample B Female 18.5
Sample C Male 17.6
Sample D Male 19.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 23.2
Samples: 4

Max nTPM: 26.9
Min nTPM: 20.8
Sample A Male 26.9
Sample B Male 24.2
Sample C Female 20.8
Sample D Female 20.9
Septum
nTPM: 23.0
Samples: 4

Max nTPM: 24.3
Min nTPM: 21.4
Sample A Male 22.6
Sample B Male 24.3
Sample C Female 21.4
Sample D Female 23.7
Ventral forebrain
nTPM: 23.7
Samples: 4

Max nTPM: 27.0
Min nTPM: 20.9
Sample A Male 23.1
Sample B Male 27.0
Sample C Female 23.6
Sample D Female 20.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
75081005 Antisense, RP_060412_04_H10, Mouse strain C57BL/6J (56 days, male) 0.2
71493879 Antisense, RP_050913_02_H11, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.2
75081005 Antisense, RP_060412_04_H10, Mouse strain C57BL/6J (56 days, male) 0.4
71493879 Antisense, RP_050913_02_H11, Mouse strain C57BL/6J (56 days, male) 0.0

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